Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AL161935.2-201ENST00000414627 60 ntBASIC1.33□□□□□ -2.2
TRIM49BA6NDI0 RNU7-34P-201ENST00000459394 64 ntBASIC1.33□□□□□ -2.2
TRIM49BA6NDI0 Y_RNA.641-201ENST00000459414 105 ntBASIC1.33□□□□□ -2.2
TRIM49BA6NDI0 SNORD116-28-201ENST00000516123 91 ntBASIC1.33□□□□□ -2.2
TRIM49BA6NDI0 AC024405.2-202ENST00000532731 184 ntBASIC1.33□□□□□ -2.2
TRIM49BA6NDI0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.33□□□□□ -2.2
TRIM49BA6NDI0 MIR4709-201ENST00000577272 72 ntBASIC1.33□□□□□ -2.2
TRIM49BA6NDI0 MIR3149-201ENST00000584629 83 ntBASIC1.33□□□□□ -2.2
TRIM49BA6NDI0 AC005357.1-201ENST00000588399 301 ntBASIC1.33□□□□□ -2.2
TRIM49BA6NDI0 AC021506.2-201ENST00000612354 169 ntBASIC1.33□□□□□ -2.2
TRIM49BA6NDI0 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.33□□□□□ -2.2
TRIM49BA6NDI0 AC006435.5-201ENST00000624486 112 ntBASIC1.33□□□□□ -2.2
TRIM49BA6NDI0 snoU18.1-201ENST00000629629 71 ntBASIC1.33□□□□□ -2.2
TRIM49BA6NDI0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.33□□□□□ -2.2
TRIM49BA6NDI0 Y_RNA.14-201ENST00000362415 103 ntBASIC1.32□□□□□ -2.2
TRIM49BA6NDI0 RNU6-1272P-201ENST00000362776 107 ntBASIC1.32□□□□□ -2.2
TRIM49BA6NDI0 Y_RNA.368-201ENST00000365547 113 ntBASIC1.32□□□□□ -2.2
TRIM49BA6NDI0 RNU6-1289P-201ENST00000384431 106 ntBASIC1.32□□□□□ -2.2
TRIM49BA6NDI0 Y_RNA.539-201ENST00000384635 107 ntBASIC1.32□□□□□ -2.2
TRIM49BA6NDI0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
TRIM49BA6NDI0 RNU6-440P-201ENST00000390882 105 ntBASIC1.32□□□□□ -2.2
TRIM49BA6NDI0 RNU6-383P-201ENST00000410864 94 ntBASIC1.32□□□□□ -2.2
TRIM49BA6NDI0 AL390729.2-201ENST00000416137 156 ntBASIC1.32□□□□□ -2.2
TRIM49BA6NDI0 CALM2P4-201ENST00000430810 426 ntBASIC1.32□□□□□ -2.2
TRIM49BA6NDI0 RPL30P7-201ENST00000479312 323 ntBASIC1.32□□□□□ -2.2
TRIM49BA6NDI0 MIR3128-201ENST00000581957 66 ntBASIC1.32□□□□□ -2.2
TRIM49BA6NDI0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.32□□□□□ -2.2
TRIM49BA6NDI0 AL157834.3-201ENST00000615543 103 ntBASIC1.32□□□□□ -2.2
TRIM49BA6NDI0 U2.14-201ENST00000615943 113 ntBASIC1.32□□□□□ -2.2
TRIM49BA6NDI0 7SK.10-201ENST00000621414 298 ntBASIC1.32□□□□□ -2.2
TRIM49BA6NDI0 RNU4-41P-201ENST00000364426 143 ntBASIC1.31□□□□□ -2.2
TRIM49BA6NDI0 RNU6-326P-201ENST00000365480 107 ntBASIC1.31□□□□□ -2.2
TRIM49BA6NDI0 RNU6-463P-201ENST00000384340 107 ntBASIC1.31□□□□□ -2.2
TRIM49BA6NDI0 Y_RNA.518-201ENST00000384552 113 ntBASIC1.31□□□□□ -2.2
TRIM49BA6NDI0 Y_RNA.621-201ENST00000411065 96 ntBASIC1.31□□□□□ -2.2
TRIM49BA6NDI0 Z98949.2-201ENST00000440996 144 ntBASIC1.31□□□□□ -2.2
TRIM49BA6NDI0 RNU6-1132P-201ENST00000459214 107 ntBASIC1.31□□□□□ -2.2
TRIM49BA6NDI0 RNU6-1143P-201ENST00000516125 104 ntBASIC1.31□□□□□ -2.2
TRIM49BA6NDI0 RNU6-1278P-201ENST00000516130 107 ntBASIC1.31□□□□□ -2.2
TRIM49BA6NDI0 AC011604.1-201ENST00000545978 196 ntBASIC1.31□□□□□ -2.2
TRIM49BA6NDI0 AL160236.1-201ENST00000556317 195 ntBASIC1.31□□□□□ -2.2
TRIM49BA6NDI0 AC015688.6-201ENST00000577737 104 ntBASIC1.31□□□□□ -2.2
TRIM49BA6NDI0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TRIM49BA6NDI0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
TRIM49BA6NDI0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
TRIM49BA6NDI0 Y_RNA.275-201ENST00000364726 110 ntBASIC1.3□□□□□ -2.2
TRIM49BA6NDI0 SNX2P2-201ENST00000424553 323 ntBASIC1.3□□□□□ -2.2
TRIM49BA6NDI0 MTND4LP30-201ENST00000454092 297 ntBASIC1.3□□□□□ -2.2
TRIM49BA6NDI0 AC093850.1-201ENST00000454121 251 ntBASIC1.3□□□□□ -2.2
TRIM49BA6NDI0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.3□□□□□ -2.2
TRIM49BA6NDI0 RNY3P16-201ENST00000516338 101 ntBASIC1.3□□□□□ -2.2
TRIM49BA6NDI0 RNU7-115P-201ENST00000516433 55 ntBASIC1.3□□□□□ -2.2
TRIM49BA6NDI0 AC024995.1-201ENST00000523014 93 ntBASIC1.3□□□□□ -2.2
TRIM49BA6NDI0 MIR4778-201ENST00000577635 80 ntBASIC1.3□□□□□ -2.2
TRIM49BA6NDI0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.3□□□□□ -2.2
TRIM49BA6NDI0 AL591926.4-201ENST00000616895 298 ntBASIC1.3□□□□□ -2.2
TRIM49BA6NDI0 MIR548AY-201ENST00000617669 107 ntBASIC1.3□□□□□ -2.2
TRIM49BA6NDI0 AL353770.2-201ENST00000620024 78 ntBASIC1.3□□□□□ -2.2
TRIM49BA6NDI0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TRIM49BA6NDI0 Y_RNA.44-201ENST00000362676 108 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 SNORA25.8-201ENST00000364831 128 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 SNORA25.9-201ENST00000365087 128 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 RNU6-211P-201ENST00000384047 107 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 Y_RNA.447-201ENST00000384184 113 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 Y_RNA.452-201ENST00000384202 108 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 RNU6-950P-201ENST00000384651 107 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 Y_RNA.562-201ENST00000384695 113 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 MIR499A-201ENST00000384903 122 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 SNORA53-201ENST00000391141 249 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 U8.16-201ENST00000391279 133 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 SNRPGP10-201ENST00000432323 225 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 RPL23AP54-201ENST00000495129 419 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 OR9P1P-201ENST00000496431 281 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 SNORA70.12-201ENST00000516084 153 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 SNORA27.4-201ENST00000516650 95 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 AC136628.3-201ENST00000521868 290 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 POLR3GP1-201ENST00000594073 261 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 AC005972.2-201ENST00000604690 348 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 AC011921.3-201ENST00000605540 361 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 U4.1-201ENST00000620349 87 ntBASIC1.29□□□□□ -2.2
TRIM49BA6NDI0 MIRLET7C-201ENST00000362160 84 ntBASIC1.28□□□□□ -2.2
TRIM49BA6NDI0 Y_RNA.253-201ENST00000364562 112 ntBASIC1.28□□□□□ -2.2
TRIM49BA6NDI0 Y_RNA.269-201ENST00000364685 89 ntBASIC1.28□□□□□ -2.2
TRIM49BA6NDI0 Y_RNA.288-201ENST00000364854 92 ntBASIC1.28□□□□□ -2.2
TRIM49BA6NDI0 RNU6-702P-201ENST00000364982 107 ntBASIC1.28□□□□□ -2.2
TRIM49BA6NDI0 RNU6-514P-201ENST00000384208 107 ntBASIC1.28□□□□□ -2.2
TRIM49BA6NDI0 Y_RNA.456-201ENST00000384232 111 ntBASIC1.28□□□□□ -2.2
TRIM49BA6NDI0 RNU6-1031P-201ENST00000384773 107 ntBASIC1.28□□□□□ -2.2
TRIM49BA6NDI0 MIR194-1-201ENST00000384892 85 ntBASIC1.28□□□□□ -2.2
TRIM49BA6NDI0 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
TRIM49BA6NDI0 PIGPP3-201ENST00000425307 415 ntBASIC1.28□□□□□ -2.2
TRIM49BA6NDI0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.28□□□□□ -2.2
TRIM49BA6NDI0 RNU6-341P-201ENST00000516973 96 ntBASIC1.28□□□□□ -2.2
TRIM49BA6NDI0 AC019288.1-201ENST00000557918 224 ntBASIC1.28□□□□□ -2.2
TRIM49BA6NDI0 AC127455.1-201ENST00000565496 145 ntBASIC1.28□□□□□ -2.2
TRIM49BA6NDI0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.28□□□□□ -2.2
TRIM49BA6NDI0 AL512605.2-201ENST00000592972 256 ntBASIC1.28□□□□□ -2.2
TRIM49BA6NDI0 AC062037.2-201ENST00000610137 73 ntBASIC1.28□□□□□ -2.2
TRIM49BA6NDI0 AC106754.2-201ENST00000623006 233 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms