Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RNU6-918P-201ENST00000391219 106 ntBASIC1.72□□□□□ -2.13
TCRBV7S3A2A0A539 JTBP1-201ENST00000441314 247 ntBASIC1.72□□□□□ -2.13
TCRBV7S3A2A0A539 PGBD4P5-201ENST00000445958 426 ntBASIC1.72□□□□□ -2.13
TCRBV7S3A2A0A539 AL138752.1-201ENST00000452964 351 ntBASIC1.72□□□□□ -2.13
TCRBV7S3A2A0A539 UBL5P3-201ENST00000475112 231 ntBASIC1.72□□□□□ -2.13
TCRBV7S3A2A0A539 NDUFA4P2-201ENST00000489989 244 ntBASIC1.72□□□□□ -2.13
TCRBV7S3A2A0A539 RNA5SP182-201ENST00000516064 82 ntBASIC1.72□□□□□ -2.13
TCRBV7S3A2A0A539 MIR4308-201ENST00000580634 81 ntBASIC1.72□□□□□ -2.13
TCRBV7S3A2A0A539 MIR8081-201ENST00000611533 95 ntBASIC1.72□□□□□ -2.13
TCRBV7S3A2A0A539 AC084768.2-201ENST00000622736 221 ntBASIC1.72□□□□□ -2.13
TCRBV7S3A2A0A539 AC027279.3-201ENST00000625055 122 ntBASIC1.72□□□□□ -2.13
TCRBV7S3A2A0A539 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.72□□□□□ -2.13
TCRBV7S3A2A0A539 MIR424-201ENST00000362227 98 ntBASIC1.71□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-1123P-201ENST00000362347 106 ntBASIC1.71□□□□□ -2.14
TCRBV7S3A2A0A539 Y_RNA.7-201ENST00000362352 102 ntBASIC1.71□□□□□ -2.14
TCRBV7S3A2A0A539 SNORD114-1-201ENST00000362705 72 ntBASIC1.71□□□□□ -2.14
TCRBV7S3A2A0A539 SNORD68-201ENST00000363214 84 ntBASIC1.71□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-103P-201ENST00000363686 107 ntBASIC1.71□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-414P-201ENST00000363705 104 ntBASIC1.71□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-131P-201ENST00000391144 107 ntBASIC1.71□□□□□ -2.14
TCRBV7S3A2A0A539 CALM2P4-201ENST00000430810 426 ntBASIC1.71□□□□□ -2.14
TCRBV7S3A2A0A539 SCARNA8-201ENST00000515924 131 ntBASIC1.71□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-1007P-201ENST00000516586 107 ntBASIC1.71□□□□□ -2.14
TCRBV7S3A2A0A539 RNA5SP168-201ENST00000516642 112 ntBASIC1.71□□□□□ -2.14
TCRBV7S3A2A0A539 uc_338.4-201ENST00000616635 176 ntBASIC1.71□□□□□ -2.14
TCRBV7S3A2A0A539 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-203P-201ENST00000384038 104 ntBASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-439P-201ENST00000384188 106 ntBASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-1228P-201ENST00000391014 107 ntBASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 U8.16-201ENST00000391279 133 ntBASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-493P-201ENST00000391321 108 ntBASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 RNU2-40P-201ENST00000410833 196 ntBASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 AC023449.1-201ENST00000454464 154 ntBASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 Y_RNA.644-201ENST00000459006 113 ntBASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 SNORA59A-201ENST00000459326 152 ntBASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 CYCTP-201ENST00000504253 315 ntBASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 Y_RNA.674-201ENST00000516362 113 ntBASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 SNORA77B-201ENST00000578179 125 ntBASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 MIR4513-201ENST00000581077 86 ntBASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 AC008507.4-201ENST00000585464 127 ntBASIC1.7□□□□□ -2.14
TCRBV7S3A2A0A539 Y_RNA.29-201ENST00000362570 113 ntBASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-833P-201ENST00000363486 107 ntBASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-1020P-201ENST00000363684 107 ntBASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-923P-201ENST00000364753 107 ntBASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 RNA5SP126-201ENST00000365092 109 ntBASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-1138P-201ENST00000365359 106 ntBASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 SNORA70B-201ENST00000384210 135 ntBASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 MIR660-201ENST00000385235 97 ntBASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 U8.13-201ENST00000390842 128 ntBASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 RNU2-55P-201ENST00000411146 174 ntBASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 AC004965.1-201ENST00000413033 213 ntBASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 SNORD77.4-201ENST00000516158 81 ntBASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 AC120024.3-201ENST00000603167 156 ntBASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 MIR8074-201ENST00000615081 81 ntBASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 AC095038.3-201ENST00000634439 195 ntBASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.69□□□□□ -2.14
TCRBV7S3A2A0A539 Y_RNA.238-201ENST00000364441 102 ntBASIC1.68□□□□□ -2.14
TCRBV7S3A2A0A539 Y_RNA.242-201ENST00000364473 110 ntBASIC1.68□□□□□ -2.14
TCRBV7S3A2A0A539 SNORD50B-201ENST00000364995 70 ntBASIC1.68□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-47P-201ENST00000383866 107 ntBASIC1.68□□□□□ -2.14
TCRBV7S3A2A0A539 Y_RNA.571-201ENST00000384753 98 ntBASIC1.68□□□□□ -2.14
TCRBV7S3A2A0A539 MIR583-201ENST00000384846 75 ntBASIC1.68□□□□□ -2.14
TCRBV7S3A2A0A539 MLLT10P1-201ENST00000418346 262 ntBASIC1.68□□□□□ -2.14
TCRBV7S3A2A0A539 RPL23AP42-201ENST00000471152 471 ntBASIC1.68□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-453P-201ENST00000516819 85 ntBASIC1.68□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-250P-201ENST00000516958 103 ntBASIC1.68□□□□□ -2.14
TCRBV7S3A2A0A539 SNORA81.3-201ENST00000517283 198 ntBASIC1.68□□□□□ -2.14
TCRBV7S3A2A0A539 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.68□□□□□ -2.14
TCRBV7S3A2A0A539 MIR3122-201ENST00000577243 73 ntBASIC1.68□□□□□ -2.14
TCRBV7S3A2A0A539 MIR4744-201ENST00000581563 82 ntBASIC1.68□□□□□ -2.14
TCRBV7S3A2A0A539 AL442644.1-201ENST00000454390 3105 ntBASIC1.67□□□□□ -2.14
TCRBV7S3A2A0A539 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
TCRBV7S3A2A0A539 snoU2-30.1-201ENST00000365012 70 ntBASIC1.67□□□□□ -2.14
TCRBV7S3A2A0A539 Y_RNA.336-201ENST00000365307 109 ntBASIC1.67□□□□□ -2.14
TCRBV7S3A2A0A539 Y_RNA.587-201ENST00000391210 103 ntBASIC1.67□□□□□ -2.14
TCRBV7S3A2A0A539 Y_RNA.793-201ENST00000411222 111 ntBASIC1.67□□□□□ -2.14
TCRBV7S3A2A0A539 RNU2-64P-201ENST00000411315 191 ntBASIC1.67□□□□□ -2.14
TCRBV7S3A2A0A539 AC245047.8-201ENST00000456455 284 ntBASIC1.67□□□□□ -2.14
TCRBV7S3A2A0A539 RPL23AP94-201ENST00000512518 302 ntBASIC1.67□□□□□ -2.14
TCRBV7S3A2A0A539 SNORD45.4-201ENST00000516629 73 ntBASIC1.67□□□□□ -2.14
TCRBV7S3A2A0A539 SNORA44.1-201ENST00000517031 108 ntBASIC1.67□□□□□ -2.14
TCRBV7S3A2A0A539 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.67□□□□□ -2.14
TCRBV7S3A2A0A539 AL049861.1-201ENST00000603130 150 ntBASIC1.67□□□□□ -2.14
TCRBV7S3A2A0A539 AC072026.1-201ENST00000605023 201 ntBASIC1.67□□□□□ -2.14
TCRBV7S3A2A0A539 MIR6845-201ENST00000613182 61 ntBASIC1.67□□□□□ -2.14
TCRBV7S3A2A0A539 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-1084P-201ENST00000362498 107 ntBASIC1.66□□□□□ -2.14
TCRBV7S3A2A0A539 MIR30A-201ENST00000385092 71 ntBASIC1.66□□□□□ -2.14
TCRBV7S3A2A0A539 MT-TT-201ENST00000387460 66 ntBASIC1.66□□□□□ -2.14
TCRBV7S3A2A0A539 AL606845.1-201ENST00000404881 255 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms