Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.35□□□□□ -2.03
TRAV20A0A0B4J274 AC006441.5-201ENST00000612680 209 ntBASIC2.35□□□□□ -2.03
TRAV20A0A0B4J274 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TRAV20A0A0B4J274 MIR9-1-201ENST00000385198 89 ntBASIC2.34□□□□□ -2.03
TRAV20A0A0B4J274 MIR891A-201ENST00000401237 79 ntBASIC2.34□□□□□ -2.03
TRAV20A0A0B4J274 SNRPGP14-201ENST00000435400 219 ntBASIC2.34□□□□□ -2.03
TRAV20A0A0B4J274 RN7SKP132-201ENST00000516001 208 ntBASIC2.34□□□□□ -2.03
TRAV20A0A0B4J274 RNU7-12P-201ENST00000516030 62 ntBASIC2.34□□□□□ -2.03
TRAV20A0A0B4J274 RNU6-406P-201ENST00000516470 107 ntBASIC2.34□□□□□ -2.03
TRAV20A0A0B4J274 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
TRAV20A0A0B4J274 Z82195.2-201ENST00000612348 18351 ntBASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 AC131280.1-202ENST00000624067 4211 ntBASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 MIR6073-201ENST00000352083 89 ntBASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 MIR449A-201ENST00000362113 91 ntBASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 MIR196B-201ENST00000384852 84 ntBASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 RNU6-360P-201ENST00000390944 104 ntBASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 MIR548O-201ENST00000408583 114 ntBASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 SNORD109B-201ENST00000458961 67 ntBASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 SNORD109A-201ENST00000459128 67 ntBASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 AC092991.1-201ENST00000477176 376 ntBASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 AC099513.1-201ENST00000490423 301 ntBASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 RNA5SP272-201ENST00000516095 111 ntBASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 AL365205.2-201ENST00000594586 68 ntBASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 MIR203B-201ENST00000636080 86 ntBASIC2.33□□□□□ -2.04
TRAV20A0A0B4J274 RNU6-859P-201ENST00000362728 107 ntBASIC2.32□□□□□ -2.04
TRAV20A0A0B4J274 RNU6-833P-201ENST00000363486 107 ntBASIC2.32□□□□□ -2.04
TRAV20A0A0B4J274 SNORA1-201ENST00000384107 130 ntBASIC2.32□□□□□ -2.04
TRAV20A0A0B4J274 MIR548A2-201ENST00000384956 97 ntBASIC2.32□□□□□ -2.04
TRAV20A0A0B4J274 RNA5SP212-201ENST00000391223 107 ntBASIC2.32□□□□□ -2.04
TRAV20A0A0B4J274 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.32□□□□□ -2.04
TRAV20A0A0B4J274 RNU7-197P-201ENST00000458836 62 ntBASIC2.32□□□□□ -2.04
TRAV20A0A0B4J274 SNORA18.4-201ENST00000516440 124 ntBASIC2.32□□□□□ -2.04
TRAV20A0A0B4J274 MIR3129-201ENST00000581095 76 ntBASIC2.32□□□□□ -2.04
TRAV20A0A0B4J274 ZNF861P-201ENST00000588126 639 ntBASIC2.32□□□□□ -2.04
TRAV20A0A0B4J274 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.32□□□□□ -2.04
TRAV20A0A0B4J274 AL137847.3-201ENST00000611521 109 ntBASIC2.32□□□□□ -2.04
TRAV20A0A0B4J274 AL513423.1-201ENST00000621695 132 ntBASIC2.32□□□□□ -2.04
TRAV20A0A0B4J274 AC091895.1-201ENST00000624494 256 ntBASIC2.32□□□□□ -2.04
TRAV20A0A0B4J274 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
TRAV20A0A0B4J274 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
TRAV20A0A0B4J274 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
TRAV20A0A0B4J274 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
TRAV20A0A0B4J274 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
TRAV20A0A0B4J274 SNORD38C-201ENST00000384381 69 ntBASIC2.31□□□□□ -2.04
TRAV20A0A0B4J274 Y_RNA.542-201ENST00000384641 111 ntBASIC2.31□□□□□ -2.04
TRAV20A0A0B4J274 AL138827.1-201ENST00000402666 306 ntBASIC2.31□□□□□ -2.04
TRAV20A0A0B4J274 RNA5SP21-201ENST00000410917 96 ntBASIC2.31□□□□□ -2.04
TRAV20A0A0B4J274 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.31□□□□□ -2.04
TRAV20A0A0B4J274 PGBD4P5-201ENST00000445958 426 ntBASIC2.31□□□□□ -2.04
TRAV20A0A0B4J274 RNU7-25P-201ENST00000516544 62 ntBASIC2.31□□□□□ -2.04
TRAV20A0A0B4J274 AC079600.2-201ENST00000550076 130 ntBASIC2.31□□□□□ -2.04
TRAV20A0A0B4J274 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.31□□□□□ -2.04
TRAV20A0A0B4J274 MIR4287-201ENST00000579398 78 ntBASIC2.31□□□□□ -2.04
TRAV20A0A0B4J274 MIR4435-1-201ENST00000582552 80 ntBASIC2.31□□□□□ -2.04
TRAV20A0A0B4J274 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.31□□□□□ -2.04
TRAV20A0A0B4J274 AC132825.6-201ENST00000638861 357 ntBASIC2.31□□□□□ -2.04
TRAV20A0A0B4J274 AC008555.8-201ENST00000623602 2168 ntBASIC2.31□□□□□ -2.04
TRAV20A0A0B4J274 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TRAV20A0A0B4J274 AC010332.2-201ENST00000613083 1904 ntBASIC2.3□□□□□ -2.04
TRAV20A0A0B4J274 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
TRAV20A0A0B4J274 Y_RNA.420-201ENST00000384043 110 ntBASIC2.3□□□□□ -2.04
TRAV20A0A0B4J274 RNU6-301P-201ENST00000384277 107 ntBASIC2.3□□□□□ -2.04
TRAV20A0A0B4J274 SNORA20-201ENST00000384662 132 ntBASIC2.3□□□□□ -2.04
TRAV20A0A0B4J274 MIR512-1-201ENST00000384913 84 ntBASIC2.3□□□□□ -2.04
TRAV20A0A0B4J274 MIR518F-201ENST00000384973 87 ntBASIC2.3□□□□□ -2.04
TRAV20A0A0B4J274 RNA5SP127-201ENST00000411051 133 ntBASIC2.3□□□□□ -2.04
TRAV20A0A0B4J274 AC015726.2-201ENST00000620112 122 ntBASIC2.3□□□□□ -2.04
TRAV20A0A0B4J274 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRAV20A0A0B4J274 RNY1P11-201ENST00000363759 113 ntBASIC2.29□□□□□ -2.04
TRAV20A0A0B4J274 MIR660-201ENST00000385235 97 ntBASIC2.29□□□□□ -2.04
TRAV20A0A0B4J274 Y_RNA.584-201ENST00000391090 114 ntBASIC2.29□□□□□ -2.04
TRAV20A0A0B4J274 RNU6-460P-201ENST00000391158 108 ntBASIC2.29□□□□□ -2.04
TRAV20A0A0B4J274 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.29□□□□□ -2.04
TRAV20A0A0B4J274 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAV20A0A0B4J274 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.29□□□□□ -2.04
TRAV20A0A0B4J274 AL773524.1-201ENST00000614065 229 ntBASIC2.29□□□□□ -2.04
TRAV20A0A0B4J274 SNORD3E-202ENST00000627253 216 ntBASIC2.29□□□□□ -2.04
TRAV20A0A0B4J274 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.29□□□□□ -2.04
TRAV20A0A0B4J274 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRAV20A0A0B4J274 MIR26A1-201ENST00000362205 77 ntBASIC2.28□□□□□ -2.04
TRAV20A0A0B4J274 Y_RNA.251-201ENST00000364551 99 ntBASIC2.28□□□□□ -2.04
TRAV20A0A0B4J274 Y_RNA.547-201ENST00000384654 119 ntBASIC2.28□□□□□ -2.04
TRAV20A0A0B4J274 MIR624-201ENST00000385217 97 ntBASIC2.28□□□□□ -2.04
TRAV20A0A0B4J274 RNU6-257P-201ENST00000410238 98 ntBASIC2.28□□□□□ -2.04
TRAV20A0A0B4J274 AC244636.1-201ENST00000421152 228 ntBASIC2.28□□□□□ -2.04
TRAV20A0A0B4J274 AC093850.1-201ENST00000454121 251 ntBASIC2.28□□□□□ -2.04
TRAV20A0A0B4J274 MIR4778-201ENST00000577635 80 ntBASIC2.28□□□□□ -2.04
TRAV20A0A0B4J274 AC131055.1-201ENST00000584626 316 ntBASIC2.28□□□□□ -2.04
TRAV20A0A0B4J274 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
TRAV20A0A0B4J274 AC080100.1-201ENST00000624239 5356 ntBASIC2.27□□□□□ -2.05
TRAV20A0A0B4J274 MIR424-201ENST00000362227 98 ntBASIC2.27□□□□□ -2.05
TRAV20A0A0B4J274 RNU1-35P-201ENST00000362782 153 ntBASIC2.27□□□□□ -2.05
TRAV20A0A0B4J274 RNU6-1292P-201ENST00000383856 107 ntBASIC2.27□□□□□ -2.05
TRAV20A0A0B4J274 SNORA6-201ENST00000384033 151 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms