Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 SNORA75-201ENST00000384158 137 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU6-318P-201ENST00000384283 103 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 SNORA26.5-201ENST00000391215 123 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU4-55P-201ENST00000410731 137 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU2-61P-201ENST00000411069 191 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU7-185P-201ENST00000459215 60 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 AC104692.1-201ENST00000472406 90 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU6-256P-201ENST00000516747 97 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 MIR4802-201ENST00000581881 80 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 MIR4636-201ENST00000582271 80 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 AC073648.5-201ENST00000603502 305 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 AL670379.3-201ENST00000605040 251 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 MIR8064-201ENST00000612863 90 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 AC023510.2-201ENST00000622162 746 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 AC068137.3-201ENST00000639191 341 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 SNORD114-28-201ENST00000363610 72 ntBASIC-0.33□□□□□ -2.46
TRAV1-1A0A0B4J248 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.33□□□□□ -2.46
TRAV1-1A0A0B4J248 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.33□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU6-442P-201ENST00000383968 104 ntBASIC-0.33□□□□□ -2.46
TRAV1-1A0A0B4J248 SNORA24-201ENST00000384096 131 ntBASIC-0.33□□□□□ -2.46
TRAV1-1A0A0B4J248 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.33□□□□□ -2.46
TRAV1-1A0A0B4J248 MIR892B-201ENST00000401279 77 ntBASIC-0.33□□□□□ -2.46
TRAV1-1A0A0B4J248 MIR1265-201ENST00000408444 86 ntBASIC-0.33□□□□□ -2.46
TRAV1-1A0A0B4J248 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.33□□□□□ -2.46
TRAV1-1A0A0B4J248 snoU13.16-201ENST00000459350 104 ntBASIC-0.33□□□□□ -2.46
TRAV1-1A0A0B4J248 PRDX4P1-201ENST00000507189 574 ntBASIC-0.33□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU6-782P-201ENST00000516852 104 ntBASIC-0.33□□□□□ -2.46
TRAV1-1A0A0B4J248 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.33□□□□□ -2.46
TRAV1-1A0A0B4J248 AP001180.6-201ENST00000584918 159 ntBASIC-0.33□□□□□ -2.46
TRAV1-1A0A0B4J248 AC006380.1-201ENST00000603598 186 ntBASIC-0.33□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU1-29P-201ENST00000606574 126 ntBASIC-0.33□□□□□ -2.46
TRAV1-1A0A0B4J248 AC022960.3-201ENST00000619794 441 ntBASIC-0.33□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU6-161P-201ENST00000363051 106 ntBASIC-0.34□□□□□ -2.46
TRAV1-1A0A0B4J248 AL031003.1-201ENST00000404229 172 ntBASIC-0.34□□□□□ -2.46
TRAV1-1A0A0B4J248 RN7SKP142-201ENST00000411236 328 ntBASIC-0.34□□□□□ -2.46
TRAV1-1A0A0B4J248 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.34□□□□□ -2.46
TRAV1-1A0A0B4J248 AL512326.2-201ENST00000426359 151 ntBASIC-0.34□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU7-159P-201ENST00000459284 62 ntBASIC-0.34□□□□□ -2.46
TRAV1-1A0A0B4J248 RPL39P34-201ENST00000477141 156 ntBASIC-0.34□□□□□ -2.46
TRAV1-1A0A0B4J248 AC092447.9-201ENST00000603395 144 ntBASIC-0.34□□□□□ -2.46
TRAV1-1A0A0B4J248 AC027449.1-201ENST00000608890 407 ntBASIC-0.34□□□□□ -2.46
TRAV1-1A0A0B4J248 AC091931.1-201ENST00000623488 728 ntBASIC-0.34□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.35□□□□□ -2.47
TRAV1-1A0A0B4J248 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.35□□□□□ -2.47
TRAV1-1A0A0B4J248 SNORD116-11-201ENST00000383882 92 ntBASIC-0.35□□□□□ -2.47
TRAV1-1A0A0B4J248 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.35□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-269P-201ENST00000391077 97 ntBASIC-0.35□□□□□ -2.47
TRAV1-1A0A0B4J248 MIR1257-201ENST00000408490 117 ntBASIC-0.35□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-855P-201ENST00000410395 104 ntBASIC-0.35□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.35□□□□□ -2.47
TRAV1-1A0A0B4J248 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.35□□□□□ -2.47
TRAV1-1A0A0B4J248 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.35□□□□□ -2.47
TRAV1-1A0A0B4J248 MTND3P21-201ENST00000433774 331 ntBASIC-0.35□□□□□ -2.47
TRAV1-1A0A0B4J248 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.35□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU7-165P-201ENST00000458864 60 ntBASIC-0.35□□□□□ -2.47
TRAV1-1A0A0B4J248 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.35□□□□□ -2.47
TRAV1-1A0A0B4J248 AL050303.3-201ENST00000613704 284 ntBASIC-0.35□□□□□ -2.47
TRAV1-1A0A0B4J248 AC004467.1-201ENST00000615678 330 ntBASIC-0.35□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-874P-201ENST00000362390 105 ntBASIC-0.36□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-879P-201ENST00000364328 108 ntBASIC-0.36□□□□□ -2.47
TRAV1-1A0A0B4J248 SNORD114-12-201ENST00000365400 75 ntBASIC-0.36□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.36□□□□□ -2.47
TRAV1-1A0A0B4J248 RNA5SP163-201ENST00000410304 99 ntBASIC-0.36□□□□□ -2.47
TRAV1-1A0A0B4J248 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.36□□□□□ -2.47
TRAV1-1A0A0B4J248 HMGN2P22-201ENST00000427588 175 ntBASIC-0.36□□□□□ -2.47
TRAV1-1A0A0B4J248 SNORD4A-201ENST00000459174 72 ntBASIC-0.36□□□□□ -2.47
TRAV1-1A0A0B4J248 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.36□□□□□ -2.47
TRAV1-1A0A0B4J248 AC011352.1-201ENST00000512300 793 ntBASIC-0.36□□□□□ -2.47
TRAV1-1A0A0B4J248 LRRC34P1-201ENST00000542742 915 ntBASIC-0.36□□□□□ -2.47
TRAV1-1A0A0B4J248 AL355297.3-201ENST00000604082 446 ntBASIC-0.36□□□□□ -2.47
TRAV1-1A0A0B4J248 AC006441.5-201ENST00000612680 209 ntBASIC-0.36□□□□□ -2.47
TRAV1-1A0A0B4J248 AC087588.2-201ENST00000617667 426 ntBASIC-0.36□□□□□ -2.47
TRAV1-1A0A0B4J248 Z69908.1-201ENST00000622603 247 ntBASIC-0.36□□□□□ -2.47
TRAV1-1A0A0B4J248 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-767P-201ENST00000384132 107 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-842P-201ENST00000384269 107 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-306P-201ENST00000384617 107 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 MIR106A-201ENST00000384870 81 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 MIR518F-201ENST00000384973 87 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 MIR563-201ENST00000385080 79 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 Z95118.1-201ENST00000421372 247 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 MTND3P7-201ENST00000474435 343 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 RN7SKP298-201ENST00000515950 94 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 AC105029.1-201ENST00000520250 669 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 MTND1P24-201ENST00000552175 861 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 AC138869.1-201ENST00000568623 124 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 AC055872.1-201ENST00000570978 278 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 AC018638.8-201ENST00000588755 281 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 MIR8055-201ENST00000610739 97 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 MIR8066-201ENST00000617280 78 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 uc_338.22-201ENST00000622722 187 ntBASIC-0.37□□□□□ -2.47
TRAV1-1A0A0B4J248 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms