Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC069257.2-201ENST00000441819 155 ntBASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 AL138752.1-201ENST00000452964 351 ntBASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 AC233266.1-201ENST00000454518 96 ntBASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 RNU6-1096P-201ENST00000517089 102 ntBASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 AP003357.1-201ENST00000604497 148 ntBASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 AC242852.1-201ENST00000612151 96 ntBASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 AL365265.1-201ENST00000621045 234 ntBASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 AC244015.1-201ENST00000622301 99 ntBASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 MIR411-201ENST00000362239 96 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 SNORA33-201ENST00000363664 130 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 Y_RNA.267-201ENST00000364679 109 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 Y_RNA.308-201ENST00000365043 101 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 SNORA72-201ENST00000384339 132 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 SNORA8.3-201ENST00000384679 139 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 Y_RNA.793-201ENST00000411222 111 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 POLR2J4-204ENST00000418424 324 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 AC091021.1-201ENST00000468051 388 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 RNU7-193P-201ENST00000516723 65 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 Y_RNA.700-201ENST00000516806 100 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 AC127455.1-201ENST00000565496 145 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 MIR3935-201ENST00000583472 104 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 Z83818.1-201ENST00000603584 150 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 Y_RNA.802-201ENST00000614892 130 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 U1.36-201ENST00000620684 176 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 MIR6079-201ENST00000635807 62 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 AC018630.2-201ENST00000534866 2403 ntBASIC1.87□□□□□ -2.11
RAI2Q9Y5P3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 Y_RNA.36-201ENST00000362602 112 ntBASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 RNU6-1020P-201ENST00000363684 107 ntBASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 Y_RNA.178-201ENST00000363832 102 ntBASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 RNU6-392P-201ENST00000364926 101 ntBASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 SNORA67.5-201ENST00000391036 107 ntBASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 SNORD23.1-201ENST00000408212 104 ntBASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 MIR1283-2-201ENST00000408621 87 ntBASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 AC099677.2-201ENST00000436385 175 ntBASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 AL163195.1-201ENST00000496941 348 ntBASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 RNU6-182P-201ENST00000516970 105 ntBASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 AC011604.1-201ENST00000545978 196 ntBASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 MIR4724-201ENST00000579485 89 ntBASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 MIR4448-201ENST00000584360 86 ntBASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 MIR8081-201ENST00000611533 95 ntBASIC1.86□□□□□ -2.11
RAI2Q9Y5P3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
RAI2Q9Y5P3 Y_RNA.29-201ENST00000362570 113 ntBASIC1.85□□□□□ -2.11
RAI2Q9Y5P3 SNORA16.1-201ENST00000364597 132 ntBASIC1.85□□□□□ -2.11
RAI2Q9Y5P3 SNORA16B-201ENST00000364674 135 ntBASIC1.85□□□□□ -2.11
RAI2Q9Y5P3 Y_RNA.274-201ENST00000364714 101 ntBASIC1.85□□□□□ -2.11
RAI2Q9Y5P3 RNU4-17P-201ENST00000365598 141 ntBASIC1.85□□□□□ -2.11
RAI2Q9Y5P3 RNU2-7P-201ENST00000410794 178 ntBASIC1.85□□□□□ -2.11
RAI2Q9Y5P3 HMGN2P38-201ENST00000423806 265 ntBASIC1.85□□□□□ -2.11
RAI2Q9Y5P3 Z98949.2-201ENST00000440996 144 ntBASIC1.85□□□□□ -2.11
RAI2Q9Y5P3 RPS4XP11-201ENST00000446897 772 ntBASIC1.85□□□□□ -2.11
RAI2Q9Y5P3 Y_RNA.644-201ENST00000459006 113 ntBASIC1.85□□□□□ -2.11
RAI2Q9Y5P3 RNU6-437P-201ENST00000459408 95 ntBASIC1.85□□□□□ -2.11
RAI2Q9Y5P3 RPS26P45-201ENST00000471748 340 ntBASIC1.85□□□□□ -2.11
RAI2Q9Y5P3 AC107393.1-201ENST00000512403 346 ntBASIC1.85□□□□□ -2.11
RAI2Q9Y5P3 Y_RNA.674-201ENST00000516362 113 ntBASIC1.85□□□□□ -2.11
RAI2Q9Y5P3 RNU6-1291P-201ENST00000516591 104 ntBASIC1.85□□□□□ -2.11
RAI2Q9Y5P3 SNORA31.25-201ENST00000517242 134 ntBASIC1.85□□□□□ -2.11
RAI2Q9Y5P3 RNU7-128P-201ENST00000517247 62 ntBASIC1.85□□□□□ -2.11
RAI2Q9Y5P3 RNU6-923P-201ENST00000364753 107 ntBASIC1.84□□□□□ -2.11
RAI2Q9Y5P3 RNU6-493P-201ENST00000391321 108 ntBASIC1.84□□□□□ -2.11
RAI2Q9Y5P3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.84□□□□□ -2.11
RAI2Q9Y5P3 RPS29P11-201ENST00000496507 171 ntBASIC1.84□□□□□ -2.11
RAI2Q9Y5P3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.84□□□□□ -2.11
RAI2Q9Y5P3 RNU2-56P-201ENST00000516826 190 ntBASIC1.84□□□□□ -2.11
RAI2Q9Y5P3 RNU6-341P-201ENST00000516973 96 ntBASIC1.84□□□□□ -2.11
RAI2Q9Y5P3 SNORA81.3-201ENST00000517283 198 ntBASIC1.84□□□□□ -2.11
RAI2Q9Y5P3 MIR4303-201ENST00000581299 66 ntBASIC1.84□□□□□ -2.11
RAI2Q9Y5P3 AL512598.1-201ENST00000610158 273 ntBASIC1.84□□□□□ -2.11
RAI2Q9Y5P3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.84□□□□□ -2.11
RAI2Q9Y5P3 AC022513.1-201ENST00000624512 117 ntBASIC1.84□□□□□ -2.11
RAI2Q9Y5P3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
RAI2Q9Y5P3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
RAI2Q9Y5P3 MIR9-3-201ENST00000385084 90 ntBASIC1.83□□□□□ -2.12
RAI2Q9Y5P3 SNORA48.1-201ENST00000390879 135 ntBASIC1.83□□□□□ -2.12
RAI2Q9Y5P3 AL627390.1-201ENST00000396055 340 ntBASIC1.83□□□□□ -2.12
RAI2Q9Y5P3 AL512604.1-201ENST00000404812 257 ntBASIC1.83□□□□□ -2.12
RAI2Q9Y5P3 SUMO2P12-201ENST00000405924 140 ntBASIC1.83□□□□□ -2.12
RAI2Q9Y5P3 RNU2-40P-201ENST00000410833 196 ntBASIC1.83□□□□□ -2.12
RAI2Q9Y5P3 RNA5SP501-201ENST00000410990 112 ntBASIC1.83□□□□□ -2.12
RAI2Q9Y5P3 AC245047.3-201ENST00000429428 127 ntBASIC1.83□□□□□ -2.12
RAI2Q9Y5P3 MTND2P29-201ENST00000438595 412 ntBASIC1.83□□□□□ -2.12
RAI2Q9Y5P3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.83□□□□□ -2.12
RAI2Q9Y5P3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 227.1 ms