Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHGA4Q9Y5G9 AL606517.2-201ENST00000442855 241 ntBASIC3.94□□□□□ -1.78
PCDHGA4Q9Y5G9 CYCSP35-201ENST00000451978 304 ntBASIC3.94□□□□□ -1.78
PCDHGA4Q9Y5G9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHGA4Q9Y5G9 SNORA28-201ENST00000606769 126 ntBASIC3.94□□□□□ -1.78
PCDHGA4Q9Y5G9 MIR4791-201ENST00000607666 84 ntBASIC3.94□□□□□ -1.78
PCDHGA4Q9Y5G9 MIR6500-201ENST00000622700 86 ntBASIC3.94□□□□□ -1.78
PCDHGA4Q9Y5G9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA4Q9Y5G9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA4Q9Y5G9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHGA4Q9Y5G9 MIRLET7C-201ENST00000362160 84 ntBASIC3.93□□□□□ -1.78
PCDHGA4Q9Y5G9 RNA5SP295-201ENST00000362655 121 ntBASIC3.93□□□□□ -1.78
PCDHGA4Q9Y5G9 RNU6-862P-201ENST00000362804 105 ntBASIC3.93□□□□□ -1.78
PCDHGA4Q9Y5G9 RNU6-525P-201ENST00000363685 104 ntBASIC3.93□□□□□ -1.78
PCDHGA4Q9Y5G9 RNU6-480P-201ENST00000384332 107 ntBASIC3.93□□□□□ -1.78
PCDHGA4Q9Y5G9 RNU6-519P-201ENST00000410590 108 ntBASIC3.93□□□□□ -1.78
PCDHGA4Q9Y5G9 AL450471.1-201ENST00000447509 127 ntBASIC3.93□□□□□ -1.78
PCDHGA4Q9Y5G9 PRSS3P4-201ENST00000453323 162 ntBASIC3.93□□□□□ -1.78
PCDHGA4Q9Y5G9 RPS29P29-201ENST00000456396 171 ntBASIC3.93□□□□□ -1.78
PCDHGA4Q9Y5G9 MIR5684-201ENST00000585074 65 ntBASIC3.93□□□□□ -1.78
PCDHGA4Q9Y5G9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHGA4Q9Y5G9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PCDHGA4Q9Y5G9 SNORA60-201ENST00000362396 134 ntBASIC3.92□□□□□ -1.78
PCDHGA4Q9Y5G9 RNA5SP124-201ENST00000362739 110 ntBASIC3.92□□□□□ -1.78
PCDHGA4Q9Y5G9 RNU4-32P-201ENST00000363404 141 ntBASIC3.92□□□□□ -1.78
PCDHGA4Q9Y5G9 Y_RNA.168-201ENST00000363740 102 ntBASIC3.92□□□□□ -1.78
PCDHGA4Q9Y5G9 Y_RNA.173-201ENST00000363776 113 ntBASIC3.92□□□□□ -1.78
PCDHGA4Q9Y5G9 MIR7-3-201ENST00000384898 110 ntBASIC3.92□□□□□ -1.78
PCDHGA4Q9Y5G9 MIR592-201ENST00000384959 97 ntBASIC3.92□□□□□ -1.78
PCDHGA4Q9Y5G9 MIR181B2-201ENST00000385004 89 ntBASIC3.92□□□□□ -1.78
PCDHGA4Q9Y5G9 RNU6-1190P-201ENST00000410811 104 ntBASIC3.92□□□□□ -1.78
PCDHGA4Q9Y5G9 RPL29P14-201ENST00000495837 428 ntBASIC3.92□□□□□ -1.78
PCDHGA4Q9Y5G9 RNU7-143P-201ENST00000516781 65 ntBASIC3.92□□□□□ -1.78
PCDHGA4Q9Y5G9 AL020996.3-201ENST00000606617 222 ntBASIC3.92□□□□□ -1.78
PCDHGA4Q9Y5G9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHGA4Q9Y5G9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA4Q9Y5G9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA4Q9Y5G9 Y_RNA.99-201ENST00000363138 105 ntBASIC3.91□□□□□ -1.78
PCDHGA4Q9Y5G9 RNU6-624P-201ENST00000363411 107 ntBASIC3.91□□□□□ -1.78
PCDHGA4Q9Y5G9 RNU6-411P-201ENST00000384451 107 ntBASIC3.91□□□□□ -1.78
PCDHGA4Q9Y5G9 SNORD38.2-201ENST00000384470 69 ntBASIC3.91□□□□□ -1.78
PCDHGA4Q9Y5G9 RNU6-380P-201ENST00000410207 107 ntBASIC3.91□□□□□ -1.78
PCDHGA4Q9Y5G9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHGA4Q9Y5G9 RNU6-667P-201ENST00000517186 102 ntBASIC3.91□□□□□ -1.78
PCDHGA4Q9Y5G9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA4Q9Y5G9 AL161756.2-201ENST00000604597 246 ntBASIC3.91□□□□□ -1.78
PCDHGA4Q9Y5G9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA4Q9Y5G9 AC245060.5-201ENST00000610778 3293 ntBASIC3.91□□□□□ -1.78
PCDHGA4Q9Y5G9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA4Q9Y5G9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.9□□□□□ -1.78
PCDHGA4Q9Y5G9 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PCDHGA4Q9Y5G9 PWAR6-201ENST00000552334 4618 ntBASIC3.9□□□□□ -1.78
PCDHGA4Q9Y5G9 Y_RNA.448-201ENST00000384185 108 ntBASIC3.9□□□□□ -1.79
PCDHGA4Q9Y5G9 MIR3134-201ENST00000579433 74 ntBASIC3.9□□□□□ -1.79
PCDHGA4Q9Y5G9 AC005000.2-201ENST00000605468 310 ntBASIC3.9□□□□□ -1.79
PCDHGA4Q9Y5G9 AC020891.4-201ENST00000605745 93 ntBASIC3.9□□□□□ -1.79
PCDHGA4Q9Y5G9 AL121772.2-201ENST00000614331 297 ntBASIC3.9□□□□□ -1.79
PCDHGA4Q9Y5G9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDHGA4Q9Y5G9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDHGA4Q9Y5G9 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.9□□□□□ -1.79
PCDHGA4Q9Y5G9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCDHGA4Q9Y5G9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 SNORD35B-201ENST00000363660 87 ntBASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 SNORA24-201ENST00000384096 131 ntBASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 RNU6-160P-201ENST00000384591 107 ntBASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 MIR561-201ENST00000385216 97 ntBASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 RNA5SP109-201ENST00000391010 116 ntBASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 RNU7-73P-201ENST00000458743 63 ntBASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 AC234781.5-201ENST00000508429 271 ntBASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 RNU6-917P-201ENST00000516294 104 ntBASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 RNU7-35P-201ENST00000517174 62 ntBASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 AC025627.2-201ENST00000576220 160 ntBASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 AC012676.2-201ENST00000619258 186 ntBASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 MIR8054-201ENST00000620877 86 ntBASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 AC110079.1-202ENST00000635213 138 ntBASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 MIR7515-201ENST00000637837 67 ntBASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA4Q9Y5G9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHGA4Q9Y5G9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PCDHGA4Q9Y5G9 AC093578.1-201ENST00000415219 368 ntBASIC3.88□□□□□ -1.79
PCDHGA4Q9Y5G9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHGA4Q9Y5G9 RNU6-557P-201ENST00000516842 110 ntBASIC3.88□□□□□ -1.79
PCDHGA4Q9Y5G9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHGA4Q9Y5G9 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHGA4Q9Y5G9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHGA4Q9Y5G9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA4Q9Y5G9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA4Q9Y5G9 GABRG2-229ENST00000641017 3628 ntBASIC3.87□□□□□ -1.79
PCDHGA4Q9Y5G9 RNA5SP119-201ENST00000362715 117 ntBASIC3.87□□□□□ -1.79
PCDHGA4Q9Y5G9 RNU6-833P-201ENST00000363486 107 ntBASIC3.87□□□□□ -1.79
PCDHGA4Q9Y5G9 SNORA73.2-201ENST00000364946 201 ntBASIC3.87□□□□□ -1.79
PCDHGA4Q9Y5G9 RNA5SP138-201ENST00000365098 114 ntBASIC3.87□□□□□ -1.79
PCDHGA4Q9Y5G9 RNU6-342P-201ENST00000384521 104 ntBASIC3.87□□□□□ -1.79
PCDHGA4Q9Y5G9 MIR184-201ENST00000384962 84 ntBASIC3.87□□□□□ -1.79
PCDHGA4Q9Y5G9 MIR1265-201ENST00000408444 86 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms