Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.56□□□□□ -2
CTDP1Q9Y5B0 U6.73-201ENST00000619194 103 ntBASIC2.56□□□□□ -2
CTDP1Q9Y5B0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CTDP1Q9Y5B0 AC010332.2-201ENST00000613083 1904 ntBASIC2.56□□□□□ -2
CTDP1Q9Y5B0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CTDP1Q9Y5B0 SNORD45.3-201ENST00000363836 72 ntBASIC2.55□□□□□ -2
CTDP1Q9Y5B0 SNORA25B-201ENST00000365507 128 ntBASIC2.55□□□□□ -2
CTDP1Q9Y5B0 RNU6-959P-201ENST00000384671 107 ntBASIC2.55□□□□□ -2
CTDP1Q9Y5B0 RNU6-417P-201ENST00000384712 107 ntBASIC2.55□□□□□ -2
CTDP1Q9Y5B0 Y_RNA.586-201ENST00000391146 98 ntBASIC2.55□□□□□ -2
CTDP1Q9Y5B0 RNU6-257P-201ENST00000410238 98 ntBASIC2.55□□□□□ -2
CTDP1Q9Y5B0 RNU4-43P-201ENST00000410628 137 ntBASIC2.55□□□□□ -2
CTDP1Q9Y5B0 RPS27P1-201ENST00000450552 247 ntBASIC2.55□□□□□ -2
CTDP1Q9Y5B0 AC011406.1-201ENST00000512440 370 ntBASIC2.55□□□□□ -2
CTDP1Q9Y5B0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.55□□□□□ -2
CTDP1Q9Y5B0 MIR2681-201ENST00000581814 105 ntBASIC2.55□□□□□ -2
CTDP1Q9Y5B0 AL049861.1-201ENST00000603130 150 ntBASIC2.55□□□□□ -2
CTDP1Q9Y5B0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.55□□□□□ -2
CTDP1Q9Y5B0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.55□□□□□ -2
CTDP1Q9Y5B0 Y_RNA.203-201ENST00000364106 102 ntBASIC2.54□□□□□ -2
CTDP1Q9Y5B0 SNORA16B-201ENST00000364674 135 ntBASIC2.54□□□□□ -2
CTDP1Q9Y5B0 RNU6-1186P-201ENST00000410429 97 ntBASIC2.54□□□□□ -2
CTDP1Q9Y5B0 SRIP3-201ENST00000413200 219 ntBASIC2.54□□□□□ -2
CTDP1Q9Y5B0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.54□□□□□ -2
CTDP1Q9Y5B0 SNRPGP8-201ENST00000454064 226 ntBASIC2.54□□□□□ -2
CTDP1Q9Y5B0 AC023449.1-201ENST00000454464 154 ntBASIC2.54□□□□□ -2
CTDP1Q9Y5B0 RNU6-62P-201ENST00000516526 102 ntBASIC2.54□□□□□ -2
CTDP1Q9Y5B0 MIR514B-201ENST00000516774 80 ntBASIC2.54□□□□□ -2
CTDP1Q9Y5B0 AC011604.1-201ENST00000545978 196 ntBASIC2.54□□□□□ -2
CTDP1Q9Y5B0 AC112693.2-201ENST00000556538 232 ntBASIC2.54□□□□□ -2
CTDP1Q9Y5B0 MIR6844-201ENST00000637122 62 ntBASIC2.54□□□□□ -2
CTDP1Q9Y5B0 AC100821.1-201ENST00000523153 2479 ntBASIC2.53□□□□□ -2
CTDP1Q9Y5B0 ZNF702P-202ENST00000434269 1966 ntBASIC2.53□□□□□ -2
CTDP1Q9Y5B0 SNORD114-1-201ENST00000362705 72 ntBASIC2.53□□□□□ -2
CTDP1Q9Y5B0 snoU2-30.2-201ENST00000362805 70 ntBASIC2.53□□□□□ -2
CTDP1Q9Y5B0 RNU6-1080P-201ENST00000383982 107 ntBASIC2.53□□□□□ -2
CTDP1Q9Y5B0 SNORA64-201ENST00000384674 134 ntBASIC2.53□□□□□ -2
CTDP1Q9Y5B0 RNU6-768P-201ENST00000384683 107 ntBASIC2.53□□□□□ -2
CTDP1Q9Y5B0 SNORA40-201ENST00000388090 126 ntBASIC2.53□□□□□ -2
CTDP1Q9Y5B0 AC018634.1-201ENST00000437554 401 ntBASIC2.53□□□□□ -2
CTDP1Q9Y5B0 RNA5SP200-201ENST00000516360 103 ntBASIC2.53□□□□□ -2
CTDP1Q9Y5B0 RPL23AP91-201ENST00000569211 455 ntBASIC2.53□□□□□ -2
CTDP1Q9Y5B0 AC073413.2-201ENST00000604332 360 ntBASIC2.53□□□□□ -2
CTDP1Q9Y5B0 AL021707.8-201ENST00000609428 183 ntBASIC2.53□□□□□ -2
CTDP1Q9Y5B0 MIR219B-201ENST00000637023 88 ntBASIC2.53□□□□□ -2
CTDP1Q9Y5B0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CTDP1Q9Y5B0 Y_RNA.99-201ENST00000363138 105 ntBASIC2.52□□□□□ -2.01
CTDP1Q9Y5B0 Y_RNA.393-201ENST00000383936 102 ntBASIC2.52□□□□□ -2.01
CTDP1Q9Y5B0 RNU6-22P-201ENST00000384355 107 ntBASIC2.52□□□□□ -2.01
CTDP1Q9Y5B0 SNORA20-201ENST00000384662 132 ntBASIC2.52□□□□□ -2.01
CTDP1Q9Y5B0 MIR520G-201ENST00000385064 90 ntBASIC2.52□□□□□ -2.01
CTDP1Q9Y5B0 HMGN2P39-201ENST00000398005 273 ntBASIC2.52□□□□□ -2.01
CTDP1Q9Y5B0 Y_RNA.621-201ENST00000411065 96 ntBASIC2.52□□□□□ -2.01
CTDP1Q9Y5B0 AC245102.2-201ENST00000448956 180 ntBASIC2.52□□□□□ -2.01
CTDP1Q9Y5B0 RNU6-1041P-201ENST00000516254 102 ntBASIC2.52□□□□□ -2.01
CTDP1Q9Y5B0 RNU6-1096P-201ENST00000517089 102 ntBASIC2.52□□□□□ -2.01
CTDP1Q9Y5B0 AC026271.5-201ENST00000577873 130 ntBASIC2.52□□□□□ -2.01
CTDP1Q9Y5B0 MIR3646-201ENST00000578301 84 ntBASIC2.52□□□□□ -2.01
CTDP1Q9Y5B0 MIR4524B-201ENST00000581569 115 ntBASIC2.52□□□□□ -2.01
CTDP1Q9Y5B0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.52□□□□□ -2.01
CTDP1Q9Y5B0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.52□□□□□ -2.01
CTDP1Q9Y5B0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CTDP1Q9Y5B0 RNU1-96P-201ENST00000364163 162 ntBASIC2.51□□□□□ -2.01
CTDP1Q9Y5B0 Y_RNA.432-201ENST00000384087 111 ntBASIC2.51□□□□□ -2.01
CTDP1Q9Y5B0 SNORA67.3-201ENST00000384366 140 ntBASIC2.51□□□□□ -2.01
CTDP1Q9Y5B0 RNU11-5P-201ENST00000391216 129 ntBASIC2.51□□□□□ -2.01
CTDP1Q9Y5B0 RNU2-55P-201ENST00000411146 174 ntBASIC2.51□□□□□ -2.01
CTDP1Q9Y5B0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.51□□□□□ -2.01
CTDP1Q9Y5B0 MIR378D2-201ENST00000580636 98 ntBASIC2.51□□□□□ -2.01
CTDP1Q9Y5B0 AC009831.4-201ENST00000620744 325 ntBASIC2.51□□□□□ -2.01
CTDP1Q9Y5B0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.51□□□□□ -2.01
CTDP1Q9Y5B0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
CTDP1Q9Y5B0 RNU2-51P-201ENST00000410708 197 ntBASIC2.5□□□□□ -2.01
CTDP1Q9Y5B0 HMGN2P3-201ENST00000433603 273 ntBASIC2.5□□□□□ -2.01
CTDP1Q9Y5B0 HMGN2P5-201ENST00000436882 273 ntBASIC2.5□□□□□ -2.01
CTDP1Q9Y5B0 AL353689.1-201ENST00000438895 199 ntBASIC2.5□□□□□ -2.01
CTDP1Q9Y5B0 RNU7-99P-201ENST00000516271 62 ntBASIC2.5□□□□□ -2.01
CTDP1Q9Y5B0 RNU6-1299P-201ENST00000516316 100 ntBASIC2.5□□□□□ -2.01
CTDP1Q9Y5B0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.5□□□□□ -2.01
CTDP1Q9Y5B0 RNU6-197P-201ENST00000516680 100 ntBASIC2.5□□□□□ -2.01
CTDP1Q9Y5B0 NDUFA5P6-201ENST00000542110 379 ntBASIC2.5□□□□□ -2.01
CTDP1Q9Y5B0 AL627230.6-201ENST00000611129 280 ntBASIC2.5□□□□□ -2.01
CTDP1Q9Y5B0 AL137847.3-201ENST00000611521 109 ntBASIC2.5□□□□□ -2.01
CTDP1Q9Y5B0 AL359075.3-201ENST00000613288 217 ntBASIC2.5□□□□□ -2.01
CTDP1Q9Y5B0 uc_338.4-201ENST00000616635 176 ntBASIC2.5□□□□□ -2.01
CTDP1Q9Y5B0 RNU6-1209P-201ENST00000363655 107 ntBASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 Y_RNA.796-201ENST00000364268 102 ntBASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 Y_RNA.799-201ENST00000364992 102 ntBASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 Y_RNA.420-201ENST00000384043 110 ntBASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 RNA5SP467-201ENST00000391274 118 ntBASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 MIR1289-2-201ENST00000408360 111 ntBASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 MTND4LP9-201ENST00000427694 174 ntBASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 AC233266.1-201ENST00000454518 96 ntBASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 RNU6-313P-201ENST00000516317 112 ntBASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 RNU6-479P-201ENST00000516348 105 ntBASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 AL096840.1-201ENST00000603287 93 ntBASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 AC242852.1-201ENST00000612151 96 ntBASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 JPX_2.1-201ENST00000614161 69 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms