Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 RNA5SP467-201ENST00000391274 118 ntBASIC3.31□□□□□ -1.88
RTCBQ9Y3I0 RNA5SP89-201ENST00000410300 108 ntBASIC3.31□□□□□ -1.88
RTCBQ9Y3I0 AL353689.1-201ENST00000438895 199 ntBASIC3.31□□□□□ -1.88
RTCBQ9Y3I0 RPS29P12-201ENST00000460178 152 ntBASIC3.31□□□□□ -1.88
RTCBQ9Y3I0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.31□□□□□ -1.88
RTCBQ9Y3I0 IGKV3-31-201ENST00000523109 329 ntBASIC3.31□□□□□ -1.88
RTCBQ9Y3I0 AC087685.1-201ENST00000587507 141 ntBASIC3.31□□□□□ -1.88
RTCBQ9Y3I0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.31□□□□□ -1.88
RTCBQ9Y3I0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
RTCBQ9Y3I0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.31□□□□□ -1.88
RTCBQ9Y3I0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RTCBQ9Y3I0 AC108206.1-201ENST00000570186 4159 ntBASIC3.3□□□□□ -1.88
RTCBQ9Y3I0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RTCBQ9Y3I0 Y_RNA.267-201ENST00000364679 109 ntBASIC3.3□□□□□ -1.88
RTCBQ9Y3I0 Y_RNA.666-201ENST00000516187 112 ntBASIC3.3□□□□□ -1.88
RTCBQ9Y3I0 RNU6-1041P-201ENST00000516254 102 ntBASIC3.3□□□□□ -1.88
RTCBQ9Y3I0 Y_RNA.714-201ENST00000517065 90 ntBASIC3.3□□□□□ -1.88
RTCBQ9Y3I0 RNU6-667P-201ENST00000517186 102 ntBASIC3.3□□□□□ -1.88
RTCBQ9Y3I0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.3□□□□□ -1.88
RTCBQ9Y3I0 MIR3605-201ENST00000583214 100 ntBASIC3.3□□□□□ -1.88
RTCBQ9Y3I0 MIR338-201ENST00000636369 67 ntBASIC3.3□□□□□ -1.88
RTCBQ9Y3I0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTCBQ9Y3I0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RTCBQ9Y3I0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTCBQ9Y3I0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.3□□□□□ -1.88
RTCBQ9Y3I0 MIR126-201ENST00000362291 85 ntBASIC3.29□□□□□ -1.88
RTCBQ9Y3I0 MIR1263-201ENST00000408324 86 ntBASIC3.29□□□□□ -1.88
RTCBQ9Y3I0 EDDM3CP-201ENST00000415977 425 ntBASIC3.29□□□□□ -1.88
RTCBQ9Y3I0 RNU6-693P-201ENST00000516134 107 ntBASIC3.29□□□□□ -1.88
RTCBQ9Y3I0 RNU6-113P-201ENST00000516653 101 ntBASIC3.29□□□□□ -1.88
RTCBQ9Y3I0 RNU1-142P-201ENST00000516682 145 ntBASIC3.29□□□□□ -1.88
RTCBQ9Y3I0 IGKV1-22-201ENST00000524313 326 ntBASIC3.29□□□□□ -1.88
RTCBQ9Y3I0 MIR4648-201ENST00000580107 72 ntBASIC3.29□□□□□ -1.88
RTCBQ9Y3I0 MIR4635-201ENST00000583759 79 ntBASIC3.29□□□□□ -1.88
RTCBQ9Y3I0 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.29□□□□□ -1.88
RTCBQ9Y3I0 AL353149.1-201ENST00000610667 244 ntBASIC3.29□□□□□ -1.88
RTCBQ9Y3I0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.29□□□□□ -1.88
RTCBQ9Y3I0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTCBQ9Y3I0 SNRPGP13-201ENST00000442212 177 ntBASIC3.28□□□□□ -1.88
RTCBQ9Y3I0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.28□□□□□ -1.88
RTCBQ9Y3I0 RN7SKP282-201ENST00000516824 299 ntBASIC3.28□□□□□ -1.88
RTCBQ9Y3I0 U6.108-201ENST00000637764 58 ntBASIC3.28□□□□□ -1.88
RTCBQ9Y3I0 ZNF271P-202ENST00000465539 1970 ntBASIC3.28□□□□□ -1.88
RTCBQ9Y3I0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
RTCBQ9Y3I0 SNORD114-30-201ENST00000364448 72 ntBASIC3.27□□□□□ -1.89
RTCBQ9Y3I0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.27□□□□□ -1.89
RTCBQ9Y3I0 RN7SKP223-201ENST00000410582 62 ntBASIC3.27□□□□□ -1.89
RTCBQ9Y3I0 SRIP3-201ENST00000413200 219 ntBASIC3.27□□□□□ -1.89
RTCBQ9Y3I0 snoU13.23-201ENST00000458863 104 ntBASIC3.27□□□□□ -1.89
RTCBQ9Y3I0 RNU6-1149P-201ENST00000516810 97 ntBASIC3.27□□□□□ -1.89
RTCBQ9Y3I0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
RTCBQ9Y3I0 Y_RNA.528-201ENST00000384575 108 ntBASIC3.26□□□□□ -1.89
RTCBQ9Y3I0 SNORD77.3-201ENST00000391113 65 ntBASIC3.26□□□□□ -1.89
RTCBQ9Y3I0 RNA5SP136-201ENST00000410906 107 ntBASIC3.26□□□□□ -1.89
RTCBQ9Y3I0 AC007064.1-201ENST00000412238 351 ntBASIC3.26□□□□□ -1.89
RTCBQ9Y3I0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.26□□□□□ -1.89
RTCBQ9Y3I0 FTH1P12-201ENST00000432137 551 ntBASIC3.26□□□□□ -1.89
RTCBQ9Y3I0 AL031737.1-201ENST00000450125 223 ntBASIC3.26□□□□□ -1.89
RTCBQ9Y3I0 AC018868.1-201ENST00000491307 315 ntBASIC3.26□□□□□ -1.89
RTCBQ9Y3I0 RN7SL636P-201ENST00000497504 294 ntBASIC3.26□□□□□ -1.89
RTCBQ9Y3I0 SNORA9.3-201ENST00000516383 129 ntBASIC3.26□□□□□ -1.89
RTCBQ9Y3I0 RNU6-412P-201ENST00000516434 106 ntBASIC3.26□□□□□ -1.89
RTCBQ9Y3I0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.26□□□□□ -1.89
RTCBQ9Y3I0 AC022217.4-201ENST00000604389 163 ntBASIC3.26□□□□□ -1.89
RTCBQ9Y3I0 AL591926.4-201ENST00000616895 298 ntBASIC3.26□□□□□ -1.89
RTCBQ9Y3I0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.26□□□□□ -1.89
RTCBQ9Y3I0 AL355596.1-201ENST00000565399 3996 ntBASIC3.26□□□□□ -1.89
RTCBQ9Y3I0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.25□□□□□ -1.89
RTCBQ9Y3I0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RTCBQ9Y3I0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
RTCBQ9Y3I0 MIR548A2-201ENST00000384956 97 ntBASIC3.25□□□□□ -1.89
RTCBQ9Y3I0 RNU6-220P-201ENST00000390919 107 ntBASIC3.25□□□□□ -1.89
RTCBQ9Y3I0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.25□□□□□ -1.89
RTCBQ9Y3I0 Y_RNA.694-201ENST00000516677 117 ntBASIC3.25□□□□□ -1.89
RTCBQ9Y3I0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.25□□□□□ -1.89
RTCBQ9Y3I0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RTCBQ9Y3I0 Y_RNA.116-201ENST00000363292 103 ntBASIC3.24□□□□□ -1.89
RTCBQ9Y3I0 RNU6-32P-201ENST00000383948 107 ntBASIC3.24□□□□□ -1.89
RTCBQ9Y3I0 SNORD21-201ENST00000383953 95 ntBASIC3.24□□□□□ -1.89
RTCBQ9Y3I0 RNU6-13P-201ENST00000384248 107 ntBASIC3.24□□□□□ -1.89
RTCBQ9Y3I0 RNU6-12P-201ENST00000384604 107 ntBASIC3.24□□□□□ -1.89
RTCBQ9Y3I0 RNU6-41P-201ENST00000384741 107 ntBASIC3.24□□□□□ -1.89
RTCBQ9Y3I0 MIR522-201ENST00000385071 87 ntBASIC3.24□□□□□ -1.89
RTCBQ9Y3I0 RNA5SP323-201ENST00000391094 133 ntBASIC3.24□□□□□ -1.89
RTCBQ9Y3I0 RPS29P6-201ENST00000438196 145 ntBASIC3.24□□□□□ -1.89
RTCBQ9Y3I0 RNU1-131P-201ENST00000458943 161 ntBASIC3.24□□□□□ -1.89
RTCBQ9Y3I0 RNU7-94P-201ENST00000459576 63 ntBASIC3.24□□□□□ -1.89
RTCBQ9Y3I0 AL049830.1-201ENST00000468034 425 ntBASIC3.24□□□□□ -1.89
RTCBQ9Y3I0 RNA5SP385-201ENST00000515947 110 ntBASIC3.24□□□□□ -1.89
RTCBQ9Y3I0 SCARNA15-202ENST00000516881 127 ntBASIC3.24□□□□□ -1.89
RTCBQ9Y3I0 SNORA31.26-201ENST00000517250 137 ntBASIC3.24□□□□□ -1.89
RTCBQ9Y3I0 AP002004.2-201ENST00000531656 154 ntBASIC3.24□□□□□ -1.89
RTCBQ9Y3I0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 MIR450A1-201ENST00000362262 91 ntBASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 Y_RNA.99-201ENST00000363138 105 ntBASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 SNORA25B-201ENST00000365507 128 ntBASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 Y_RNA.495-201ENST00000384435 112 ntBASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 MIR515-2-201ENST00000384883 83 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms