Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 Y_RNA.297-201ENST00000364950 91 ntBASIC1.99□□□□□ -2.09
VPS4AQ9UN37 Y_RNA.435-201ENST00000384095 112 ntBASIC1.99□□□□□ -2.09
VPS4AQ9UN37 U8.13-201ENST00000390842 128 ntBASIC1.99□□□□□ -2.09
VPS4AQ9UN37 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.99□□□□□ -2.09
VPS4AQ9UN37 AC069257.2-201ENST00000441819 155 ntBASIC1.99□□□□□ -2.09
VPS4AQ9UN37 RNU6-437P-201ENST00000459408 95 ntBASIC1.99□□□□□ -2.09
VPS4AQ9UN37 AL929325.1-201ENST00000603096 117 ntBASIC1.99□□□□□ -2.09
VPS4AQ9UN37 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
VPS4AQ9UN37 RNU6-969P-201ENST00000383900 105 ntBASIC1.98□□□□□ -2.09
VPS4AQ9UN37 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
VPS4AQ9UN37 RNU6-918P-201ENST00000391219 106 ntBASIC1.98□□□□□ -2.09
VPS4AQ9UN37 Y_RNA.644-201ENST00000459006 113 ntBASIC1.98□□□□□ -2.09
VPS4AQ9UN37 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.98□□□□□ -2.09
VPS4AQ9UN37 RPL23AP54-201ENST00000495129 419 ntBASIC1.98□□□□□ -2.09
VPS4AQ9UN37 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.98□□□□□ -2.09
VPS4AQ9UN37 Y_RNA.674-201ENST00000516362 113 ntBASIC1.98□□□□□ -2.09
VPS4AQ9UN37 MIR4287-201ENST00000579398 78 ntBASIC1.98□□□□□ -2.09
VPS4AQ9UN37 MIR4308-201ENST00000580634 81 ntBASIC1.98□□□□□ -2.09
VPS4AQ9UN37 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.98□□□□□ -2.09
VPS4AQ9UN37 AL021707.8-201ENST00000609428 183 ntBASIC1.98□□□□□ -2.09
VPS4AQ9UN37 Y_RNA.802-201ENST00000614892 130 ntBASIC1.98□□□□□ -2.09
VPS4AQ9UN37 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
VPS4AQ9UN37 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
VPS4AQ9UN37 Y_RNA.118-201ENST00000363300 101 ntBASIC1.97□□□□□ -2.09
VPS4AQ9UN37 SNORA8.3-201ENST00000384679 139 ntBASIC1.97□□□□□ -2.09
VPS4AQ9UN37 RNU6-381P-201ENST00000391259 108 ntBASIC1.97□□□□□ -2.09
VPS4AQ9UN37 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS4AQ9UN37 AL138752.1-201ENST00000452964 351 ntBASIC1.97□□□□□ -2.09
VPS4AQ9UN37 RNY3P16-201ENST00000516338 101 ntBASIC1.97□□□□□ -2.09
VPS4AQ9UN37 SNORA81.3-201ENST00000517283 198 ntBASIC1.97□□□□□ -2.09
VPS4AQ9UN37 SNRPGP19-201ENST00000603826 189 ntBASIC1.97□□□□□ -2.09
VPS4AQ9UN37 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.97□□□□□ -2.09
VPS4AQ9UN37 AL627230.6-201ENST00000611129 280 ntBASIC1.97□□□□□ -2.09
VPS4AQ9UN37 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.97□□□□□ -2.09
VPS4AQ9UN37 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VPS4AQ9UN37 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VPS4AQ9UN37 Y_RNA.203-201ENST00000364106 102 ntBASIC1.96□□□□□ -2.1
VPS4AQ9UN37 snoU2_19.4-201ENST00000364329 80 ntBASIC1.96□□□□□ -2.1
VPS4AQ9UN37 RNU4-10P-201ENST00000364383 140 ntBASIC1.96□□□□□ -2.1
VPS4AQ9UN37 Y_RNA.293-201ENST00000364908 93 ntBASIC1.96□□□□□ -2.1
VPS4AQ9UN37 MIR520A-201ENST00000384862 85 ntBASIC1.96□□□□□ -2.1
VPS4AQ9UN37 RNA5SP109-201ENST00000391010 116 ntBASIC1.96□□□□□ -2.1
VPS4AQ9UN37 AL023284.1-201ENST00000403956 276 ntBASIC1.96□□□□□ -2.1
VPS4AQ9UN37 RN7SKP101-201ENST00000411376 320 ntBASIC1.96□□□□□ -2.1
VPS4AQ9UN37 AC009310.1-201ENST00000414414 451 ntBASIC1.96□□□□□ -2.1
VPS4AQ9UN37 RPL23AP63-201ENST00000498752 471 ntBASIC1.96□□□□□ -2.1
VPS4AQ9UN37 SNORA31.10-201ENST00000516482 106 ntBASIC1.96□□□□□ -2.1
VPS4AQ9UN37 RNU6-1291P-201ENST00000516591 104 ntBASIC1.96□□□□□ -2.1
VPS4AQ9UN37 AP002004.2-201ENST00000531656 154 ntBASIC1.96□□□□□ -2.1
VPS4AQ9UN37 MIR4724-201ENST00000579485 89 ntBASIC1.96□□□□□ -2.1
VPS4AQ9UN37 AL096840.1-201ENST00000603287 93 ntBASIC1.96□□□□□ -2.1
VPS4AQ9UN37 ZNF702P-202ENST00000434269 1966 ntBASIC1.96□□□□□ -2.1
VPS4AQ9UN37 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
VPS4AQ9UN37 SNORA1B-201ENST00000362535 133 ntBASIC1.95□□□□□ -2.1
VPS4AQ9UN37 Y_RNA.29-201ENST00000362570 113 ntBASIC1.95□□□□□ -2.1
VPS4AQ9UN37 Y_RNA.796-201ENST00000364268 102 ntBASIC1.95□□□□□ -2.1
VPS4AQ9UN37 Y_RNA.799-201ENST00000364992 102 ntBASIC1.95□□□□□ -2.1
VPS4AQ9UN37 Y_RNA.308-201ENST00000365043 101 ntBASIC1.95□□□□□ -2.1
VPS4AQ9UN37 RNU6-47P-201ENST00000383866 107 ntBASIC1.95□□□□□ -2.1
VPS4AQ9UN37 Y_RNA.572-201ENST00000384757 98 ntBASIC1.95□□□□□ -2.1
VPS4AQ9UN37 AL158823.1-201ENST00000418441 478 ntBASIC1.95□□□□□ -2.1
VPS4AQ9UN37 AC245047.3-201ENST00000429428 127 ntBASIC1.95□□□□□ -2.1
VPS4AQ9UN37 RNU7-120P-201ENST00000459334 63 ntBASIC1.95□□□□□ -2.1
VPS4AQ9UN37 RNA5SP437-201ENST00000517249 129 ntBASIC1.95□□□□□ -2.1
VPS4AQ9UN37 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
VPS4AQ9UN37 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS4AQ9UN37 AC012493.3-201ENST00000604494 112 ntBASIC1.95□□□□□ -2.1
VPS4AQ9UN37 AC004792.1-201ENST00000614523 137 ntBASIC1.95□□□□□ -2.1
VPS4AQ9UN37 MIR8054-201ENST00000620877 86 ntBASIC1.95□□□□□ -2.1
VPS4AQ9UN37 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
VPS4AQ9UN37 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
VPS4AQ9UN37 Y_RNA.24-201ENST00000362508 103 ntBASIC1.94□□□□□ -2.1
VPS4AQ9UN37 RNU4-17P-201ENST00000365598 141 ntBASIC1.94□□□□□ -2.1
VPS4AQ9UN37 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
VPS4AQ9UN37 SNORA12.1-201ENST00000390873 148 ntBASIC1.94□□□□□ -2.1
VPS4AQ9UN37 RNA5SP496-201ENST00000391240 109 ntBASIC1.94□□□□□ -2.1
VPS4AQ9UN37 RNU6-383P-201ENST00000410864 94 ntBASIC1.94□□□□□ -2.1
VPS4AQ9UN37 AL445646.1-201ENST00000431784 216 ntBASIC1.94□□□□□ -2.1
VPS4AQ9UN37 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.94□□□□□ -2.1
VPS4AQ9UN37 MIR4762-201ENST00000585261 75 ntBASIC1.94□□□□□ -2.1
VPS4AQ9UN37 MIR6845-201ENST00000613182 61 ntBASIC1.94□□□□□ -2.1
VPS4AQ9UN37 Y_RNA.121-201ENST00000363309 113 ntBASIC1.93□□□□□ -2.1
VPS4AQ9UN37 Y_RNA.267-201ENST00000364679 109 ntBASIC1.93□□□□□ -2.1
VPS4AQ9UN37 RNU6-1080P-201ENST00000383982 107 ntBASIC1.93□□□□□ -2.1
VPS4AQ9UN37 RNU6-440P-201ENST00000390882 105 ntBASIC1.93□□□□□ -2.1
VPS4AQ9UN37 RNA5SP212-201ENST00000391223 107 ntBASIC1.93□□□□□ -2.1
VPS4AQ9UN37 COX6CP10-201ENST00000416832 224 ntBASIC1.93□□□□□ -2.1
VPS4AQ9UN37 Z98949.2-201ENST00000440996 144 ntBASIC1.93□□□□□ -2.1
VPS4AQ9UN37 SNORD11-201ENST00000459124 84 ntBASIC1.93□□□□□ -2.1
VPS4AQ9UN37 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
VPS4AQ9UN37 MRPS17P9-201ENST00000511924 393 ntBASIC1.93□□□□□ -2.1
VPS4AQ9UN37 SCARNA8-201ENST00000515924 131 ntBASIC1.93□□□□□ -2.1
VPS4AQ9UN37 RN7SKP164-201ENST00000516138 266 ntBASIC1.93□□□□□ -2.1
VPS4AQ9UN37 RNU7-28P-201ENST00000516759 62 ntBASIC1.93□□□□□ -2.1
VPS4AQ9UN37 AC022254.1-201ENST00000567857 235 ntBASIC1.93□□□□□ -2.1
VPS4AQ9UN37 MIR2681-201ENST00000581814 105 ntBASIC1.93□□□□□ -2.1
VPS4AQ9UN37 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.93□□□□□ -2.1
VPS4AQ9UN37 snoU13.31-201ENST00000607291 104 ntBASIC1.93□□□□□ -2.1
VPS4AQ9UN37 AL391903.3-201ENST00000612158 163 ntBASIC1.93□□□□□ -2.1
VPS4AQ9UN37 Y_RNA.783-201ENST00000613546 102 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 209.8 ms