Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 RNU6-163P-201ENST00000384396 106 ntBASIC2.88□□□□□ -1.95
FOXD3Q9UJU5 AL627390.1-201ENST00000396055 340 ntBASIC2.88□□□□□ -1.95
FOXD3Q9UJU5 AL034345.1-201ENST00000407768 123 ntBASIC2.88□□□□□ -1.95
FOXD3Q9UJU5 RNU7-80P-201ENST00000459562 61 ntBASIC2.88□□□□□ -1.95
FOXD3Q9UJU5 RNA5SP341-201ENST00000516261 117 ntBASIC2.88□□□□□ -1.95
FOXD3Q9UJU5 SCARNA20.6-201ENST00000517251 106 ntBASIC2.88□□□□□ -1.95
FOXD3Q9UJU5 AP003484.1-201ENST00000530974 250 ntBASIC2.88□□□□□ -1.95
FOXD3Q9UJU5 MIR5094-201ENST00000578766 85 ntBASIC2.88□□□□□ -1.95
FOXD3Q9UJU5 AC015726.2-201ENST00000620112 122 ntBASIC2.88□□□□□ -1.95
FOXD3Q9UJU5 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
FOXD3Q9UJU5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
FOXD3Q9UJU5 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
FOXD3Q9UJU5 MIRLET7C-201ENST00000362160 84 ntBASIC2.87□□□□□ -1.95
FOXD3Q9UJU5 SNORA63D-201ENST00000364359 132 ntBASIC2.87□□□□□ -1.95
FOXD3Q9UJU5 Y_RNA.281-201ENST00000364774 94 ntBASIC2.87□□□□□ -1.95
FOXD3Q9UJU5 Y_RNA.454-201ENST00000384224 113 ntBASIC2.87□□□□□ -1.95
FOXD3Q9UJU5 RNU11-3P-201ENST00000391111 133 ntBASIC2.87□□□□□ -1.95
FOXD3Q9UJU5 RN7SL863P-201ENST00000462370 296 ntBASIC2.87□□□□□ -1.95
FOXD3Q9UJU5 AC114811.1-201ENST00000507207 168 ntBASIC2.87□□□□□ -1.95
FOXD3Q9UJU5 RNU6-240P-201ENST00000516098 97 ntBASIC2.87□□□□□ -1.95
FOXD3Q9UJU5 RNU6-830P-201ENST00000516353 107 ntBASIC2.87□□□□□ -1.95
FOXD3Q9UJU5 SNORD36C-201ENST00000516733 66 ntBASIC2.87□□□□□ -1.95
FOXD3Q9UJU5 AC104027.1-201ENST00000521887 300 ntBASIC2.87□□□□□ -1.95
FOXD3Q9UJU5 MIR4679-2-201ENST00000578358 77 ntBASIC2.87□□□□□ -1.95
FOXD3Q9UJU5 MIR2682-201ENST00000580305 110 ntBASIC2.87□□□□□ -1.95
FOXD3Q9UJU5 MIR4513-201ENST00000581077 86 ntBASIC2.87□□□□□ -1.95
FOXD3Q9UJU5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.87□□□□□ -1.95
FOXD3Q9UJU5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
FOXD3Q9UJU5 RNA5SP383-201ENST00000362934 120 ntBASIC2.86□□□□□ -1.95
FOXD3Q9UJU5 RNU1-133P-201ENST00000364867 167 ntBASIC2.86□□□□□ -1.95
FOXD3Q9UJU5 RNU6-690P-201ENST00000365242 106 ntBASIC2.86□□□□□ -1.95
FOXD3Q9UJU5 RNY1P6-201ENST00000384193 109 ntBASIC2.86□□□□□ -1.95
FOXD3Q9UJU5 RNU6-938P-201ENST00000411285 103 ntBASIC2.86□□□□□ -1.95
FOXD3Q9UJU5 RNA5SP492-201ENST00000411330 114 ntBASIC2.86□□□□□ -1.95
FOXD3Q9UJU5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.86□□□□□ -1.95
FOXD3Q9UJU5 COTL1P1-201ENST00000422309 375 ntBASIC2.86□□□□□ -1.95
FOXD3Q9UJU5 SNORA31.10-201ENST00000516482 106 ntBASIC2.86□□□□□ -1.95
FOXD3Q9UJU5 MIR4778-201ENST00000577635 80 ntBASIC2.86□□□□□ -1.95
FOXD3Q9UJU5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.86□□□□□ -1.95
FOXD3Q9UJU5 uc_338.25-201ENST00000613756 156 ntBASIC2.86□□□□□ -1.95
FOXD3Q9UJU5 MIR622-201ENST00000638396 96 ntBASIC2.86□□□□□ -1.95
FOXD3Q9UJU5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
FOXD3Q9UJU5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
FOXD3Q9UJU5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.85□□□□□ -1.95
FOXD3Q9UJU5 MIR148B-201ENST00000362252 99 ntBASIC2.85□□□□□ -1.95
FOXD3Q9UJU5 RNU6-349P-201ENST00000362402 107 ntBASIC2.85□□□□□ -1.95
FOXD3Q9UJU5 Y_RNA.309-201ENST00000365046 111 ntBASIC2.85□□□□□ -1.95
FOXD3Q9UJU5 MIR1283-2-201ENST00000408621 87 ntBASIC2.85□□□□□ -1.95
FOXD3Q9UJU5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.85□□□□□ -1.95
FOXD3Q9UJU5 RNU1-143P-201ENST00000516296 146 ntBASIC2.85□□□□□ -1.95
FOXD3Q9UJU5 SNORA64.4-201ENST00000516632 81 ntBASIC2.85□□□□□ -1.95
FOXD3Q9UJU5 SNORA18.7-201ENST00000516910 131 ntBASIC2.85□□□□□ -1.95
FOXD3Q9UJU5 AC007012.1-201ENST00000567192 175 ntBASIC2.85□□□□□ -1.95
FOXD3Q9UJU5 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.85□□□□□ -1.95
FOXD3Q9UJU5 U1.23-201ENST00000610293 146 ntBASIC2.85□□□□□ -1.95
FOXD3Q9UJU5 RNU1-68P-201ENST00000615382 146 ntBASIC2.85□□□□□ -1.95
FOXD3Q9UJU5 U1.39-201ENST00000621562 146 ntBASIC2.85□□□□□ -1.95
FOXD3Q9UJU5 AC008555.8-201ENST00000623602 2168 ntBASIC2.85□□□□□ -1.95
FOXD3Q9UJU5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
FOXD3Q9UJU5 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
FOXD3Q9UJU5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
FOXD3Q9UJU5 RNU6-833P-201ENST00000363486 107 ntBASIC2.84□□□□□ -1.95
FOXD3Q9UJU5 Y_RNA.198-201ENST00000364013 98 ntBASIC2.84□□□□□ -1.95
FOXD3Q9UJU5 MIR597-201ENST00000384968 97 ntBASIC2.84□□□□□ -1.95
FOXD3Q9UJU5 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.84□□□□□ -1.95
FOXD3Q9UJU5 ZNF861P-201ENST00000588126 639 ntBASIC2.84□□□□□ -1.95
FOXD3Q9UJU5 AC006023.1-201ENST00000603944 259 ntBASIC2.84□□□□□ -1.95
FOXD3Q9UJU5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
FOXD3Q9UJU5 AL442644.1-201ENST00000454390 3105 ntBASIC2.84□□□□□ -1.95
FOXD3Q9UJU5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
FOXD3Q9UJU5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
FOXD3Q9UJU5 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
FOXD3Q9UJU5 SNORD56.3-201ENST00000363507 71 ntBASIC2.83□□□□□ -1.96
FOXD3Q9UJU5 Y_RNA.213-201ENST00000364178 111 ntBASIC2.83□□□□□ -1.96
FOXD3Q9UJU5 SNORA7.4-201ENST00000384249 137 ntBASIC2.83□□□□□ -1.96
FOXD3Q9UJU5 RNU6-424P-201ENST00000384367 105 ntBASIC2.83□□□□□ -1.96
FOXD3Q9UJU5 MIR518A2-201ENST00000384966 87 ntBASIC2.83□□□□□ -1.96
FOXD3Q9UJU5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.83□□□□□ -1.96
FOXD3Q9UJU5 RNA5SP385-201ENST00000515947 110 ntBASIC2.83□□□□□ -1.96
FOXD3Q9UJU5 RPPH1-2P-201ENST00000516688 293 ntBASIC2.83□□□□□ -1.96
FOXD3Q9UJU5 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.83□□□□□ -1.96
FOXD3Q9UJU5 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.83□□□□□ -1.96
FOXD3Q9UJU5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
FOXD3Q9UJU5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
FOXD3Q9UJU5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
FOXD3Q9UJU5 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
FOXD3Q9UJU5 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
FOXD3Q9UJU5 AC008264.2-201ENST00000610193 3731 ntBASIC2.82□□□□□ -1.96
FOXD3Q9UJU5 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
FOXD3Q9UJU5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.82□□□□□ -1.96
FOXD3Q9UJU5 Y_RNA.351-201ENST00000365436 96 ntBASIC2.82□□□□□ -1.96
FOXD3Q9UJU5 Y_RNA.500-201ENST00000384466 111 ntBASIC2.82□□□□□ -1.96
FOXD3Q9UJU5 SNORA48.1-201ENST00000390879 135 ntBASIC2.82□□□□□ -1.96
FOXD3Q9UJU5 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.82□□□□□ -1.96
FOXD3Q9UJU5 AL031737.1-201ENST00000450125 223 ntBASIC2.82□□□□□ -1.96
FOXD3Q9UJU5 EIF4BP1-201ENST00000554881 351 ntBASIC2.82□□□□□ -1.96
FOXD3Q9UJU5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.82□□□□□ -1.96
FOXD3Q9UJU5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.82□□□□□ -1.96
FOXD3Q9UJU5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
FOXD3Q9UJU5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms