Protein–RNA interactions for Protein: Q9UHX1

PUF60, Poly(U)-binding-splicing factor PUF60, humanhuman

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60Q9UHX1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.61□□□□□ -1.99
PUF60Q9UHX1 RNU4-13P-201ENST00000364019 141 ntBASIC2.61□□□□□ -1.99
PUF60Q9UHX1 Y_RNA.393-201ENST00000383936 102 ntBASIC2.61□□□□□ -1.99
PUF60Q9UHX1 SNORA80E-201ENST00000384744 137 ntBASIC2.61□□□□□ -1.99
PUF60Q9UHX1 AL512604.1-201ENST00000404812 257 ntBASIC2.61□□□□□ -1.99
PUF60Q9UHX1 AC123900.1-201ENST00000420390 96 ntBASIC2.61□□□□□ -1.99
PUF60Q9UHX1 AC008267.6-201ENST00000441664 139 ntBASIC2.61□□□□□ -1.99
PUF60Q9UHX1 RPS4XP11-201ENST00000446897 772 ntBASIC2.61□□□□□ -1.99
PUF60Q9UHX1 RNU6-1333P-201ENST00000516162 93 ntBASIC2.61□□□□□ -1.99
PUF60Q9UHX1 RNU2-34P-201ENST00000516534 121 ntBASIC2.61□□□□□ -1.99
PUF60Q9UHX1 MIR4438-201ENST00000585271 93 ntBASIC2.61□□□□□ -1.99
PUF60Q9UHX1 AC007229.1-201ENST00000590455 412 ntBASIC2.61□□□□□ -1.99
PUF60Q9UHX1 AC120024.3-201ENST00000603167 156 ntBASIC2.61□□□□□ -1.99
PUF60Q9UHX1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
PUF60Q9UHX1 SNORD115-3-201ENST00000363100 82 ntBASIC2.6□□□□□ -1.99
PUF60Q9UHX1 Y_RNA.127-201ENST00000363386 109 ntBASIC2.6□□□□□ -1.99
PUF60Q9UHX1 Y_RNA.251-201ENST00000364551 99 ntBASIC2.6□□□□□ -1.99
PUF60Q9UHX1 RNU6-1082P-201ENST00000364574 107 ntBASIC2.6□□□□□ -1.99
PUF60Q9UHX1 RNA5SP205-201ENST00000364653 136 ntBASIC2.6□□□□□ -1.99
PUF60Q9UHX1 SNORA72-201ENST00000384339 132 ntBASIC2.6□□□□□ -1.99
PUF60Q9UHX1 RNA5SP496-201ENST00000391240 109 ntBASIC2.6□□□□□ -1.99
PUF60Q9UHX1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.6□□□□□ -1.99
PUF60Q9UHX1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PUF60Q9UHX1 AL357134.1-201ENST00000445848 426 ntBASIC2.6□□□□□ -1.99
PUF60Q9UHX1 RPS27P1-201ENST00000450552 247 ntBASIC2.6□□□□□ -1.99
PUF60Q9UHX1 RPS27P21-201ENST00000486977 252 ntBASIC2.6□□□□□ -1.99
PUF60Q9UHX1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.6□□□□□ -1.99
PUF60Q9UHX1 MIR3646-201ENST00000578301 84 ntBASIC2.6□□□□□ -1.99
PUF60Q9UHX1 MIR4769-201ENST00000584126 77 ntBASIC2.6□□□□□ -1.99
PUF60Q9UHX1 U2.20-201ENST00000613956 192 ntBASIC2.6□□□□□ -1.99
PUF60Q9UHX1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.6□□□□□ -1.99
PUF60Q9UHX1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.6□□□□□ -1.99
PUF60Q9UHX1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PUF60Q9UHX1 AC008555.8-201ENST00000623602 2168 ntBASIC2.6□□□□□ -1.99
PUF60Q9UHX1 AL596028.1-201ENST00000326971 197 ntBASIC2.59□□□□□ -1.99
PUF60Q9UHX1 RNU6-1164P-201ENST00000364428 107 ntBASIC2.59□□□□□ -1.99
PUF60Q9UHX1 SNORD116-14-201ENST00000383894 92 ntBASIC2.59□□□□□ -1.99
PUF60Q9UHX1 SNORD116-17-201ENST00000383929 92 ntBASIC2.59□□□□□ -1.99
PUF60Q9UHX1 RNU6-484P-201ENST00000384016 107 ntBASIC2.59□□□□□ -1.99
PUF60Q9UHX1 SNORD116-15-201ENST00000384445 92 ntBASIC2.59□□□□□ -1.99
PUF60Q9UHX1 SNORD116-19-201ENST00000384729 92 ntBASIC2.59□□□□□ -1.99
PUF60Q9UHX1 RNA5SP233-201ENST00000459153 113 ntBASIC2.59□□□□□ -1.99
PUF60Q9UHX1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.59□□□□□ -1.99
PUF60Q9UHX1 RNA5SP281-201ENST00000516504 135 ntBASIC2.59□□□□□ -1.99
PUF60Q9UHX1 RNU7-172P-201ENST00000517125 64 ntBASIC2.59□□□□□ -1.99
PUF60Q9UHX1 RNU2-19P-201ENST00000517288 84 ntBASIC2.59□□□□□ -1.99
PUF60Q9UHX1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.59□□□□□ -1.99
PUF60Q9UHX1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
PUF60Q9UHX1 Y_RNA.81-201ENST00000362997 102 ntBASIC2.58□□□□□ -2
PUF60Q9UHX1 Y_RNA.203-201ENST00000364106 102 ntBASIC2.58□□□□□ -2
PUF60Q9UHX1 RNU6-160P-201ENST00000384591 107 ntBASIC2.58□□□□□ -2
PUF60Q9UHX1 MIR17-201ENST00000385012 84 ntBASIC2.58□□□□□ -2
PUF60Q9UHX1 AC060773.1-201ENST00000421698 310 ntBASIC2.58□□□□□ -2
PUF60Q9UHX1 AC055731.1-201ENST00000474387 401 ntBASIC2.58□□□□□ -2
PUF60Q9UHX1 MIR514B-201ENST00000516774 80 ntBASIC2.58□□□□□ -2
PUF60Q9UHX1 RNU6-856P-201ENST00000516959 98 ntBASIC2.58□□□□□ -2
PUF60Q9UHX1 RPL23AP91-201ENST00000569211 455 ntBASIC2.58□□□□□ -2
PUF60Q9UHX1 MIR378D2-201ENST00000580636 98 ntBASIC2.58□□□□□ -2
PUF60Q9UHX1 AC046143.2-201ENST00000609789 160 ntBASIC2.58□□□□□ -2
PUF60Q9UHX1 MIR1291-201ENST00000627649 87 ntBASIC2.58□□□□□ -2
PUF60Q9UHX1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.57□□□□□ -2
PUF60Q9UHX1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
PUF60Q9UHX1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PUF60Q9UHX1 RNU6-978P-201ENST00000364371 103 ntBASIC2.57□□□□□ -2
PUF60Q9UHX1 RNA5SP465-201ENST00000391195 109 ntBASIC2.57□□□□□ -2
PUF60Q9UHX1 SNORA75.5-201ENST00000391291 81 ntBASIC2.57□□□□□ -2
PUF60Q9UHX1 Y_RNA.629-201ENST00000411368 105 ntBASIC2.57□□□□□ -2
PUF60Q9UHX1 AC026436.1-201ENST00000510537 270 ntBASIC2.57□□□□□ -2
PUF60Q9UHX1 RNU2-56P-201ENST00000516826 190 ntBASIC2.57□□□□□ -2
PUF60Q9UHX1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.57□□□□□ -2
PUF60Q9UHX1 DEFB122-202ENST00000569013 197 ntBASIC2.57□□□□□ -2
PUF60Q9UHX1 AC011603.4-201ENST00000611325 277 ntBASIC2.57□□□□□ -2
PUF60Q9UHX1 U6.73-201ENST00000619194 103 ntBASIC2.57□□□□□ -2
PUF60Q9UHX1 MIR6873-201ENST00000622788 63 ntBASIC2.57□□□□□ -2
PUF60Q9UHX1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PUF60Q9UHX1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PUF60Q9UHX1 RNU1-58P-201ENST00000362413 163 ntBASIC2.56□□□□□ -2
PUF60Q9UHX1 Y_RNA.796-201ENST00000364268 102 ntBASIC2.56□□□□□ -2
PUF60Q9UHX1 Y_RNA.799-201ENST00000364992 102 ntBASIC2.56□□□□□ -2
PUF60Q9UHX1 Y_RNA.432-201ENST00000384087 111 ntBASIC2.56□□□□□ -2
PUF60Q9UHX1 SNORD20-201ENST00000384550 80 ntBASIC2.56□□□□□ -2
PUF60Q9UHX1 AC010154.1-201ENST00000425857 269 ntBASIC2.56□□□□□ -2
PUF60Q9UHX1 snoU13.23-201ENST00000458863 104 ntBASIC2.56□□□□□ -2
PUF60Q9UHX1 SNORD11-201ENST00000459124 84 ntBASIC2.56□□□□□ -2
PUF60Q9UHX1 RNU6-197P-201ENST00000516680 100 ntBASIC2.56□□□□□ -2
PUF60Q9UHX1 AC011604.1-201ENST00000545978 196 ntBASIC2.56□□□□□ -2
PUF60Q9UHX1 AC007336.1-201ENST00000576365 3828 ntBASIC2.56□□□□□ -2
PUF60Q9UHX1 AC103810.6-201ENST00000606708 136 ntBASIC2.56□□□□□ -2
PUF60Q9UHX1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.56□□□□□ -2
PUF60Q9UHX1 TUG1_4.1-201ENST00000619464 181 ntBASIC2.56□□□□□ -2
PUF60Q9UHX1 AP001340.1-201ENST00000624405 217 ntBASIC2.56□□□□□ -2
PUF60Q9UHX1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.56□□□□□ -2
PUF60Q9UHX1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
PUF60Q9UHX1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.55□□□□□ -2
PUF60Q9UHX1 RNU6-1209P-201ENST00000363655 107 ntBASIC2.55□□□□□ -2
PUF60Q9UHX1 RNU6-597P-201ENST00000365620 102 ntBASIC2.55□□□□□ -2
PUF60Q9UHX1 MIR539-201ENST00000365690 78 ntBASIC2.55□□□□□ -2
PUF60Q9UHX1 SNORA79-201ENST00000408376 140 ntBASIC2.55□□□□□ -2
PUF60Q9UHX1 RNU1-131P-201ENST00000458943 161 ntBASIC2.55□□□□□ -2
PUF60Q9UHX1 AP001328.1-201ENST00000528550 176 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms