Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RNU6-1048P-201ENST00000364054 107 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 RNU1-96P-201ENST00000364163 162 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.217-201ENST00000364214 105 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 RNU6-818P-201ENST00000364837 108 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 RNU6-392P-201ENST00000364926 101 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 RNU6-975P-201ENST00000384296 105 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 SNORA67.2-201ENST00000384300 149 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 MIR586-201ENST00000385035 97 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 MIR758-201ENST00000390227 88 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 RNU6-918P-201ENST00000391219 106 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 RNU5A-5P-201ENST00000411054 116 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 RPL30P13-201ENST00000418873 348 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 CST2P1-201ENST00000425770 87 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 FTH1P12-201ENST00000432137 551 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 POLR2KP2-201ENST00000438155 177 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 U8.19-201ENST00000459095 133 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.641-201ENST00000459414 105 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 AC011406.1-201ENST00000512440 370 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 RNU6-191P-201ENST00000516295 94 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 RNU6-155P-201ENST00000516347 100 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 MTND5P41-201ENST00000517498 206 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 AC068338.1-201ENST00000565567 176 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 SNORA77B-201ENST00000578179 125 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 MIR4282-201ENST00000583613 67 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 AL162424.1-201ENST00000602325 221 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 snoU18.1-201ENST00000629629 71 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 AC021753.1-201ENST00000635724 168 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 U2.22-201ENST00000636441 106 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.53□□□□□ -2.17
CLIP2Q9UDT6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 AC134026.1-201ENST00000623249 2239 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 AL157777.2-201ENST00000258070 137 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 SNORA25.1-201ENST00000362326 128 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.82-201ENST00000363000 102 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.92-201ENST00000363043 102 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.136-201ENST00000363444 102 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 RNU6-137P-201ENST00000363680 108 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 RNU4-10P-201ENST00000364383 140 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.235-201ENST00000364412 102 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.306-201ENST00000365015 102 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.308-201ENST00000365043 101 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.312-201ENST00000365089 102 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.322-201ENST00000365151 102 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.329-201ENST00000365209 107 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.498-201ENST00000384460 102 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.572-201ENST00000384757 98 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 SNORA40.6-201ENST00000391153 128 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 RNU1-78P-201ENST00000391248 165 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 MIR320B2-201ENST00000408479 138 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 MIR1267-201ENST00000408723 78 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.590-201ENST00000410140 107 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 RNU2-61P-201ENST00000411069 191 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.793-201ENST00000411222 111 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 HSPE1P9-201ENST00000440046 311 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 JTBP1-201ENST00000441314 247 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 AC069257.2-201ENST00000441819 155 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 AC245517.4-201ENST00000448601 281 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 SNORD2.1-201ENST00000458762 69 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.650-201ENST00000459002 102 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 HMGN2P9-201ENST00000476875 229 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 RNU6-1219P-201ENST00000516143 112 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 RNU6-436P-201ENST00000516171 114 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 RNU6-1041P-201ENST00000516254 102 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 RNU6-346P-201ENST00000516288 111 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 SNORA27.4-201ENST00000516650 95 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 RNA5SP481-201ENST00000516814 122 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 RNU6-182P-201ENST00000516970 105 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.777-201ENST00000516982 102 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 RNU2-12P-201ENST00000517216 168 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 RNA5SP437-201ENST00000517249 129 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 AP002392.1-201ENST00000537692 208 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 MIR3133-201ENST00000583157 78 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.771-201ENST00000598668 102 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 AP001485.1-201ENST00000604799 199 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.789-201ENST00000622480 102 ntBASIC1.52□□□□□ -2.17
CLIP2Q9UDT6 UBE2WP1-201ENST00000362030 340 ntBASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.230-201ENST00000364348 109 ntBASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.270-201ENST00000364693 104 ntBASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 RNU6-211P-201ENST00000384047 107 ntBASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 RNU6-125P-201ENST00000384505 107 ntBASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 MIR548B-201ENST00000385247 97 ntBASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 SNORA53-201ENST00000391141 249 ntBASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 RNA5SP247-201ENST00000411181 105 ntBASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 AC074290.1-201ENST00000448883 135 ntBASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 AC005042.3-201ENST00000453230 174 ntBASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 RNU7-120P-201ENST00000459334 63 ntBASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 Y_RNA.637-201ENST00000459424 114 ntBASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 RPL36AP21-201ENST00000490372 323 ntBASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 RNU6-344P-201ENST00000516635 111 ntBASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 RNU6-107P-201ENST00000516643 102 ntBASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 RNA5SP54-201ENST00000516951 92 ntBASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 MIR3660-201ENST00000584845 100 ntBASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 MIR338-201ENST00000636369 67 ntBASIC1.51□□□□□ -2.17
CLIP2Q9UDT6 MIR3674-201ENST00000636576 68 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms