Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNU6-254P-201ENST00000363377 107 ntBASIC-0.58□□□□□ -2.5
VPS29Q9UBQ0 SNORA72.3-201ENST00000365074 132 ntBASIC-0.58□□□□□ -2.5
VPS29Q9UBQ0 RNU6-442P-201ENST00000383968 104 ntBASIC-0.58□□□□□ -2.5
VPS29Q9UBQ0 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.58□□□□□ -2.5
VPS29Q9UBQ0 MIR514A2-201ENST00000385131 88 ntBASIC-0.58□□□□□ -2.5
VPS29Q9UBQ0 MIR514A3-201ENST00000385132 88 ntBASIC-0.58□□□□□ -2.5
VPS29Q9UBQ0 RPL39P34-201ENST00000477141 156 ntBASIC-0.58□□□□□ -2.5
VPS29Q9UBQ0 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.58□□□□□ -2.5
VPS29Q9UBQ0 AC019193.3-201ENST00000609144 554 ntBASIC-0.58□□□□□ -2.5
VPS29Q9UBQ0 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.58□□□□□ -2.5
VPS29Q9UBQ0 RNU6-324P-201ENST00000363957 106 ntBASIC-0.59□□□□□ -2.5
VPS29Q9UBQ0 SNORD115-30-201ENST00000364117 82 ntBASIC-0.59□□□□□ -2.5
VPS29Q9UBQ0 MIR518F-201ENST00000384973 87 ntBASIC-0.59□□□□□ -2.5
VPS29Q9UBQ0 SNORA26.8-201ENST00000391306 124 ntBASIC-0.59□□□□□ -2.5
VPS29Q9UBQ0 RNA5SP163-201ENST00000410304 99 ntBASIC-0.59□□□□□ -2.5
VPS29Q9UBQ0 RNU6-855P-201ENST00000410395 104 ntBASIC-0.59□□□□□ -2.5
VPS29Q9UBQ0 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.59□□□□□ -2.5
VPS29Q9UBQ0 SUMO1P3-201ENST00000439961 304 ntBASIC-0.59□□□□□ -2.5
VPS29Q9UBQ0 MTND3P16-201ENST00000452205 344 ntBASIC-0.59□□□□□ -2.5
VPS29Q9UBQ0 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.59□□□□□ -2.5
VPS29Q9UBQ0 AC040904.1-201ENST00000590850 223 ntBASIC-0.59□□□□□ -2.5
VPS29Q9UBQ0 AC124303.1-201ENST00000605703 360 ntBASIC-0.59□□□□□ -2.5
VPS29Q9UBQ0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.59□□□□□ -2.5
VPS29Q9UBQ0 AC022306.2-201ENST00000617563 647 ntBASIC-0.59□□□□□ -2.5
VPS29Q9UBQ0 ZNF299P-201ENST00000406845 1804 ntBASIC-0.59□□□□□ -2.5
VPS29Q9UBQ0 RNU6-522P-201ENST00000364497 107 ntBASIC-0.6□□□□□ -2.51
VPS29Q9UBQ0 SNORA72-201ENST00000384339 132 ntBASIC-0.6□□□□□ -2.51
VPS29Q9UBQ0 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.6□□□□□ -2.51
VPS29Q9UBQ0 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.6□□□□□ -2.51
VPS29Q9UBQ0 RNU6-584P-201ENST00000410350 95 ntBASIC-0.6□□□□□ -2.51
VPS29Q9UBQ0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.6□□□□□ -2.51
VPS29Q9UBQ0 RNU2-13P-201ENST00000515909 113 ntBASIC-0.6□□□□□ -2.51
VPS29Q9UBQ0 AC009094.1-201ENST00000564443 426 ntBASIC-0.6□□□□□ -2.51
VPS29Q9UBQ0 AL158211.1-201ENST00000566763 763 ntBASIC-0.6□□□□□ -2.51
VPS29Q9UBQ0 AC087685.1-201ENST00000587507 141 ntBASIC-0.6□□□□□ -2.51
VPS29Q9UBQ0 AC097520.1-201ENST00000624435 385 ntBASIC-0.6□□□□□ -2.51
VPS29Q9UBQ0 MIR6828-201ENST00000636181 60 ntBASIC-0.6□□□□□ -2.51
VPS29Q9UBQ0 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.61□□□□□ -2.51
VPS29Q9UBQ0 RNU6-595P-201ENST00000363944 107 ntBASIC-0.61□□□□□ -2.51
VPS29Q9UBQ0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.61□□□□□ -2.51
VPS29Q9UBQ0 SNRPGP14-201ENST00000435400 219 ntBASIC-0.61□□□□□ -2.51
VPS29Q9UBQ0 snoU13.16-201ENST00000459350 104 ntBASIC-0.61□□□□□ -2.51
VPS29Q9UBQ0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.61□□□□□ -2.51
VPS29Q9UBQ0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.61□□□□□ -2.51
VPS29Q9UBQ0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.61□□□□□ -2.51
VPS29Q9UBQ0 MIR6779-201ENST00000617283 64 ntBASIC-0.61□□□□□ -2.51
VPS29Q9UBQ0 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.62□□□□□ -2.51
VPS29Q9UBQ0 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.62□□□□□ -2.51
VPS29Q9UBQ0 MIR329-2-201ENST00000385029 84 ntBASIC-0.62□□□□□ -2.51
VPS29Q9UBQ0 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.62□□□□□ -2.51
VPS29Q9UBQ0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.62□□□□□ -2.51
VPS29Q9UBQ0 RNU6-504P-201ENST00000516568 104 ntBASIC-0.62□□□□□ -2.51
VPS29Q9UBQ0 AC138869.1-201ENST00000568623 124 ntBASIC-0.62□□□□□ -2.51
VPS29Q9UBQ0 MIR4273-201ENST00000582824 84 ntBASIC-0.62□□□□□ -2.51
VPS29Q9UBQ0 AC011921.3-201ENST00000605540 361 ntBASIC-0.62□□□□□ -2.51
VPS29Q9UBQ0 AL391262.2-201ENST00000622466 494 ntBASIC-0.62□□□□□ -2.51
VPS29Q9UBQ0 uc_338.22-201ENST00000622722 187 ntBASIC-0.62□□□□□ -2.51
VPS29Q9UBQ0 SNORD114-28-201ENST00000363610 72 ntBASIC-0.63□□□□□ -2.51
VPS29Q9UBQ0 RNU6-268P-201ENST00000364174 107 ntBASIC-0.63□□□□□ -2.51
VPS29Q9UBQ0 RNU6-879P-201ENST00000364328 108 ntBASIC-0.63□□□□□ -2.51
VPS29Q9UBQ0 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.63□□□□□ -2.51
VPS29Q9UBQ0 RNU6-652P-201ENST00000365488 107 ntBASIC-0.63□□□□□ -2.51
VPS29Q9UBQ0 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.63□□□□□ -2.51
VPS29Q9UBQ0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.63□□□□□ -2.51
VPS29Q9UBQ0 MTND2P39-201ENST00000457230 764 ntBASIC-0.63□□□□□ -2.51
VPS29Q9UBQ0 RNU6-261P-201ENST00000459506 102 ntBASIC-0.63□□□□□ -2.51
VPS29Q9UBQ0 SNORA40.9-201ENST00000515895 93 ntBASIC-0.63□□□□□ -2.51
VPS29Q9UBQ0 MIR4752-201ENST00000579672 72 ntBASIC-0.63□□□□□ -2.51
VPS29Q9UBQ0 MIR4645-201ENST00000583158 77 ntBASIC-0.63□□□□□ -2.51
VPS29Q9UBQ0 AL355297.3-201ENST00000604082 446 ntBASIC-0.63□□□□□ -2.51
VPS29Q9UBQ0 AC091304.10-201ENST00000641554 121 ntBASIC-0.63□□□□□ -2.51
VPS29Q9UBQ0 RNU6-161P-201ENST00000363051 106 ntBASIC-0.64□□□□□ -2.51
VPS29Q9UBQ0 SNORD114-31-201ENST00000363219 75 ntBASIC-0.64□□□□□ -2.51
VPS29Q9UBQ0 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.64□□□□□ -2.51
VPS29Q9UBQ0 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.64□□□□□ -2.51
VPS29Q9UBQ0 SNORA32.3-201ENST00000384772 121 ntBASIC-0.64□□□□□ -2.51
VPS29Q9UBQ0 MIR588-201ENST00000384900 83 ntBASIC-0.64□□□□□ -2.51
VPS29Q9UBQ0 MCFD2P1-201ENST00000417812 300 ntBASIC-0.64□□□□□ -2.51
VPS29Q9UBQ0 POLR2KP2-201ENST00000438155 177 ntBASIC-0.64□□□□□ -2.51
VPS29Q9UBQ0 MTND1P17-201ENST00000448961 204 ntBASIC-0.64□□□□□ -2.51
VPS29Q9UBQ0 AC083798.1-201ENST00000472671 131 ntBASIC-0.64□□□□□ -2.51
VPS29Q9UBQ0 RNU2-12P-201ENST00000517216 168 ntBASIC-0.64□□□□□ -2.51
VPS29Q9UBQ0 AC006380.1-201ENST00000603598 186 ntBASIC-0.64□□□□□ -2.51
VPS29Q9UBQ0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.65□□□□□ -2.51
VPS29Q9UBQ0 RNY1P16-201ENST00000363063 111 ntBASIC-0.65□□□□□ -2.51
VPS29Q9UBQ0 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.65□□□□□ -2.51
VPS29Q9UBQ0 RNU6-46P-201ENST00000383860 107 ntBASIC-0.65□□□□□ -2.51
VPS29Q9UBQ0 SNORA69-201ENST00000383895 132 ntBASIC-0.65□□□□□ -2.51
VPS29Q9UBQ0 SNORD38B-201ENST00000384690 67 ntBASIC-0.65□□□□□ -2.51
VPS29Q9UBQ0 RNA5SP300-201ENST00000391197 107 ntBASIC-0.65□□□□□ -2.51
VPS29Q9UBQ0 AL031003.1-201ENST00000404229 172 ntBASIC-0.65□□□□□ -2.51
VPS29Q9UBQ0 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.65□□□□□ -2.51
VPS29Q9UBQ0 SNORD126-201ENST00000459475 77 ntBASIC-0.65□□□□□ -2.51
VPS29Q9UBQ0 TRBVB-201ENST00000477100 408 ntBASIC-0.65□□□□□ -2.51
VPS29Q9UBQ0 IGLVI-20-201ENST00000519296 130 ntBASIC-0.65□□□□□ -2.51
VPS29Q9UBQ0 MIR3666-201ENST00000607845 111 ntBASIC-0.65□□□□□ -2.51
VPS29Q9UBQ0 AC134878.1-201ENST00000619901 243 ntBASIC-0.65□□□□□ -2.51
VPS29Q9UBQ0 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.66□□□□□ -2.52
VPS29Q9UBQ0 SNORD14C-201ENST00000365382 88 ntBASIC-0.66□□□□□ -2.52
VPS29Q9UBQ0 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms