Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 TRBV12-1-201ENST00000479785 344 ntBASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 MRPS17P9-201ENST00000511924 393 ntBASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 AC097462.1-201ENST00000514125 324 ntBASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 RNU6-970P-201ENST00000516312 107 ntBASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 RNU6-826P-201ENST00000516827 104 ntBASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 RNU6-1270P-201ENST00000517128 108 ntBASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 MIR4662B-201ENST00000579498 81 ntBASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 AC006435.5-201ENST00000624486 112 ntBASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 SNORD56.5-201ENST00000364281 72 ntBASIC2.61□□□□□ -1.99
SMPD4Q9NXE4 SNORD114-30-201ENST00000364448 72 ntBASIC2.61□□□□□ -1.99
SMPD4Q9NXE4 Y_RNA.362-201ENST00000365518 110 ntBASIC2.61□□□□□ -1.99
SMPD4Q9NXE4 RNU6-1292P-201ENST00000383856 107 ntBASIC2.61□□□□□ -1.99
SMPD4Q9NXE4 RNU6-1274P-201ENST00000384557 107 ntBASIC2.61□□□□□ -1.99
SMPD4Q9NXE4 Y_RNA.544-201ENST00000384650 113 ntBASIC2.61□□□□□ -1.99
SMPD4Q9NXE4 SNORA67.4-201ENST00000384688 142 ntBASIC2.61□□□□□ -1.99
SMPD4Q9NXE4 MIR548A2-201ENST00000384956 97 ntBASIC2.61□□□□□ -1.99
SMPD4Q9NXE4 FO393413.1-201ENST00000402892 195 ntBASIC2.61□□□□□ -1.99
SMPD4Q9NXE4 RNA5SP492-201ENST00000411330 114 ntBASIC2.61□□□□□ -1.99
SMPD4Q9NXE4 AC011406.1-201ENST00000512440 370 ntBASIC2.61□□□□□ -1.99
SMPD4Q9NXE4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.61□□□□□ -1.99
SMPD4Q9NXE4 AC090517.3-201ENST00000625170 141 ntBASIC2.61□□□□□ -1.99
SMPD4Q9NXE4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
SMPD4Q9NXE4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SMPD4Q9NXE4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.61□□□□□ -1.99
SMPD4Q9NXE4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
SMPD4Q9NXE4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SMPD4Q9NXE4 MIR767-201ENST00000390228 109 ntBASIC2.6□□□□□ -1.99
SMPD4Q9NXE4 SNORD77.3-201ENST00000391113 65 ntBASIC2.6□□□□□ -1.99
SMPD4Q9NXE4 Z98742.2-201ENST00000431564 187 ntBASIC2.6□□□□□ -1.99
SMPD4Q9NXE4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.6□□□□□ -1.99
SMPD4Q9NXE4 RNU6-830P-201ENST00000516353 107 ntBASIC2.6□□□□□ -1.99
SMPD4Q9NXE4 RNU6-504P-201ENST00000516568 104 ntBASIC2.6□□□□□ -1.99
SMPD4Q9NXE4 RNU6-113P-201ENST00000516653 101 ntBASIC2.6□□□□□ -1.99
SMPD4Q9NXE4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.6□□□□□ -1.99
SMPD4Q9NXE4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SMPD4Q9NXE4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SMPD4Q9NXE4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.6□□□□□ -1.99
SMPD4Q9NXE4 AL589743.1-201ENST00000551932 2712 ntBASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 Y_RNA.49-201ENST00000362714 112 ntBASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 SNORD31B-201ENST00000364977 69 ntBASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 RNU6-1113P-201ENST00000384348 107 ntBASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 MIR1294-201ENST00000408503 142 ntBASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 AC097463.2-201ENST00000421074 142 ntBASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 MTATP8P2-201ENST00000435212 202 ntBASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 RNU6-240P-201ENST00000516098 97 ntBASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 Y_RNA.666-201ENST00000516187 112 ntBASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 AC004486.1-201ENST00000546846 233 ntBASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 MIR3670-2-201ENST00000582974 65 ntBASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 MIR3670-1-201ENST00000584160 65 ntBASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 MIR3670-3-201ENST00000584855 65 ntBASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 MIR4438-201ENST00000585271 93 ntBASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 MIR3670-4-201ENST00000612260 65 ntBASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 UCA1.1-201ENST00000620952 75 ntBASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 CTSLP2-204ENST00000629029 392 ntBASIC2.59□□□□□ -1.99
SMPD4Q9NXE4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.59□□□□□ -2
SMPD4Q9NXE4 RNU6-888P-201ENST00000363010 101 ntBASIC2.58□□□□□ -2
SMPD4Q9NXE4 RNU6-1240P-201ENST00000365155 104 ntBASIC2.58□□□□□ -2
SMPD4Q9NXE4 RNU6-1235P-201ENST00000384559 107 ntBASIC2.58□□□□□ -2
SMPD4Q9NXE4 RNU6-1152P-201ENST00000384576 107 ntBASIC2.58□□□□□ -2
SMPD4Q9NXE4 RNU6-498P-201ENST00000459468 107 ntBASIC2.58□□□□□ -2
SMPD4Q9NXE4 RNU6-948P-201ENST00000516374 107 ntBASIC2.58□□□□□ -2
SMPD4Q9NXE4 Y_RNA.685-201ENST00000516532 108 ntBASIC2.58□□□□□ -2
SMPD4Q9NXE4 RNU6-126P-201ENST00000516685 103 ntBASIC2.58□□□□□ -2
SMPD4Q9NXE4 RNU7-172P-201ENST00000517125 64 ntBASIC2.58□□□□□ -2
SMPD4Q9NXE4 MIR5009-201ENST00000578736 100 ntBASIC2.58□□□□□ -2
SMPD4Q9NXE4 SNORD53-201ENST00000579969 78 ntBASIC2.58□□□□□ -2
SMPD4Q9NXE4 uc_338.14-201ENST00000613162 166 ntBASIC2.58□□□□□ -2
SMPD4Q9NXE4 JPX_2.1-201ENST00000614161 69 ntBASIC2.58□□□□□ -2
SMPD4Q9NXE4 MALAT1.1-201ENST00000618249 95 ntBASIC2.58□□□□□ -2
SMPD4Q9NXE4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.58□□□□□ -2
SMPD4Q9NXE4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SMPD4Q9NXE4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
SMPD4Q9NXE4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
SMPD4Q9NXE4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SMPD4Q9NXE4 RNU1-72P-201ENST00000362976 153 ntBASIC2.57□□□□□ -2
SMPD4Q9NXE4 RNY1P10-201ENST00000363268 113 ntBASIC2.57□□□□□ -2
SMPD4Q9NXE4 Y_RNA.198-201ENST00000364013 98 ntBASIC2.57□□□□□ -2
SMPD4Q9NXE4 SNORA25.6-201ENST00000364121 118 ntBASIC2.57□□□□□ -2
SMPD4Q9NXE4 Y_RNA.220-201ENST00000364244 109 ntBASIC2.57□□□□□ -2
SMPD4Q9NXE4 AC104389.3-201ENST00000445629 235 ntBASIC2.57□□□□□ -2
SMPD4Q9NXE4 RN7SL636P-201ENST00000497504 294 ntBASIC2.57□□□□□ -2
SMPD4Q9NXE4 RNU6-1096P-201ENST00000517089 102 ntBASIC2.57□□□□□ -2
SMPD4Q9NXE4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.57□□□□□ -2
SMPD4Q9NXE4 AC068339.1-201ENST00000526965 141 ntBASIC2.57□□□□□ -2
SMPD4Q9NXE4 AL590808.1-201ENST00000618696 141 ntBASIC2.57□□□□□ -2
SMPD4Q9NXE4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMPD4Q9NXE4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.57□□□□□ -2
SMPD4Q9NXE4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.56□□□□□ -2
SMPD4Q9NXE4 MIR494-201ENST00000349529 81 ntBASIC2.56□□□□□ -2
SMPD4Q9NXE4 RNU6-486P-201ENST00000363116 107 ntBASIC2.56□□□□□ -2
SMPD4Q9NXE4 Y_RNA.344-201ENST00000365381 112 ntBASIC2.56□□□□□ -2
SMPD4Q9NXE4 SNORD24-201ENST00000383884 75 ntBASIC2.56□□□□□ -2
SMPD4Q9NXE4 MIR627-201ENST00000384979 97 ntBASIC2.56□□□□□ -2
SMPD4Q9NXE4 MIR450A2-201ENST00000385022 100 ntBASIC2.56□□□□□ -2
SMPD4Q9NXE4 AC008134.1-201ENST00000420943 193 ntBASIC2.56□□□□□ -2
SMPD4Q9NXE4 SEM1P1-201ENST00000506694 209 ntBASIC2.56□□□□□ -2
SMPD4Q9NXE4 MRPS36P2-201ENST00000512569 299 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 208.4 ms