Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 Y_RNA.785-201ENST00000384290 109 ntBASIC2.07□□□□□ -2.08
VPS45Q9NRW7 RNU6-296P-201ENST00000384608 107 ntBASIC2.07□□□□□ -2.08
VPS45Q9NRW7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
VPS45Q9NRW7 FTH1P12-201ENST00000432137 551 ntBASIC2.07□□□□□ -2.08
VPS45Q9NRW7 AL138752.1-201ENST00000452964 351 ntBASIC2.07□□□□□ -2.08
VPS45Q9NRW7 RNU7-94P-201ENST00000459576 63 ntBASIC2.07□□□□□ -2.08
VPS45Q9NRW7 RPS26P45-201ENST00000471748 340 ntBASIC2.07□□□□□ -2.08
VPS45Q9NRW7 RNA5SP364-201ENST00000516938 78 ntBASIC2.07□□□□□ -2.08
VPS45Q9NRW7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.07□□□□□ -2.08
VPS45Q9NRW7 AC127455.1-201ENST00000565496 145 ntBASIC2.07□□□□□ -2.08
VPS45Q9NRW7 MIR3198-2-201ENST00000577868 80 ntBASIC2.07□□□□□ -2.08
VPS45Q9NRW7 MIR5094-201ENST00000578766 85 ntBASIC2.07□□□□□ -2.08
VPS45Q9NRW7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.07□□□□□ -2.08
VPS45Q9NRW7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VPS45Q9NRW7 AC018630.2-201ENST00000534866 2403 ntBASIC2.06□□□□□ -2.08
VPS45Q9NRW7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VPS45Q9NRW7 Y_RNA.293-201ENST00000364908 93 ntBASIC2.06□□□□□ -2.08
VPS45Q9NRW7 SNORA72-201ENST00000384339 132 ntBASIC2.06□□□□□ -2.08
VPS45Q9NRW7 MIR562-201ENST00000384894 95 ntBASIC2.06□□□□□ -2.08
VPS45Q9NRW7 SNORA36B-201ENST00000410438 131 ntBASIC2.06□□□□□ -2.08
VPS45Q9NRW7 AC245047.4-201ENST00000433189 144 ntBASIC2.06□□□□□ -2.08
VPS45Q9NRW7 RPS4XP11-201ENST00000446897 772 ntBASIC2.06□□□□□ -2.08
VPS45Q9NRW7 RPL23AP54-201ENST00000495129 419 ntBASIC2.06□□□□□ -2.08
VPS45Q9NRW7 AL163195.1-201ENST00000496941 348 ntBASIC2.06□□□□□ -2.08
VPS45Q9NRW7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS45Q9NRW7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.06□□□□□ -2.08
VPS45Q9NRW7 Z83818.1-201ENST00000603584 150 ntBASIC2.06□□□□□ -2.08
VPS45Q9NRW7 MIR6079-201ENST00000635807 62 ntBASIC2.06□□□□□ -2.08
VPS45Q9NRW7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
VPS45Q9NRW7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
VPS45Q9NRW7 RNU6-653P-201ENST00000363074 106 ntBASIC2.05□□□□□ -2.08
VPS45Q9NRW7 RNU2-2P-201ENST00000410396 191 ntBASIC2.05□□□□□ -2.08
VPS45Q9NRW7 RNA5SP57-201ENST00000459463 123 ntBASIC2.05□□□□□ -2.08
VPS45Q9NRW7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.05□□□□□ -2.08
VPS45Q9NRW7 RNU6-1096P-201ENST00000517089 102 ntBASIC2.05□□□□□ -2.08
VPS45Q9NRW7 AC100767.1-201ENST00000528178 123 ntBASIC2.05□□□□□ -2.08
VPS45Q9NRW7 MIR5688-201ENST00000580619 83 ntBASIC2.05□□□□□ -2.08
VPS45Q9NRW7 AC091178.2-201ENST00000584401 117 ntBASIC2.05□□□□□ -2.08
VPS45Q9NRW7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.05□□□□□ -2.08
VPS45Q9NRW7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VPS45Q9NRW7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.05□□□□□ -2.08
VPS45Q9NRW7 MIR378A-201ENST00000362177 66 ntBASIC2.04□□□□□ -2.08
VPS45Q9NRW7 Y_RNA.29-201ENST00000362570 113 ntBASIC2.04□□□□□ -2.08
VPS45Q9NRW7 SNORA8.3-201ENST00000384679 139 ntBASIC2.04□□□□□ -2.08
VPS45Q9NRW7 MIR526A2-201ENST00000390198 65 ntBASIC2.04□□□□□ -2.08
VPS45Q9NRW7 SNORA40.18-201ENST00000391200 128 ntBASIC2.04□□□□□ -2.08
VPS45Q9NRW7 Y_RNA.644-201ENST00000459006 113 ntBASIC2.04□□□□□ -2.08
VPS45Q9NRW7 AC091021.1-201ENST00000468051 388 ntBASIC2.04□□□□□ -2.08
VPS45Q9NRW7 Y_RNA.674-201ENST00000516362 113 ntBASIC2.04□□□□□ -2.08
VPS45Q9NRW7 RNU6-341P-201ENST00000516973 96 ntBASIC2.04□□□□□ -2.08
VPS45Q9NRW7 SNORA81.3-201ENST00000517283 198 ntBASIC2.04□□□□□ -2.08
VPS45Q9NRW7 AC103810.8-201ENST00000607347 118 ntBASIC2.04□□□□□ -2.08
VPS45Q9NRW7 Y_RNA.802-201ENST00000614892 130 ntBASIC2.04□□□□□ -2.08
VPS45Q9NRW7 AL359851.1-201ENST00000569460 4997 ntBASIC2.03□□□□□ -2.08
VPS45Q9NRW7 AC100821.1-201ENST00000523153 2479 ntBASIC2.03□□□□□ -2.08
VPS45Q9NRW7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS45Q9NRW7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS45Q9NRW7 Y_RNA.308-201ENST00000365043 101 ntBASIC2.03□□□□□ -2.08
VPS45Q9NRW7 SUMO2P12-201ENST00000405924 140 ntBASIC2.03□□□□□ -2.08
VPS45Q9NRW7 MTND5P15-201ENST00000434246 349 ntBASIC2.03□□□□□ -2.08
VPS45Q9NRW7 RNU6-437P-201ENST00000459408 95 ntBASIC2.03□□□□□ -2.08
VPS45Q9NRW7 RNU6-182P-201ENST00000516970 105 ntBASIC2.03□□□□□ -2.08
VPS45Q9NRW7 CBX3P4-201ENST00000538909 354 ntBASIC2.03□□□□□ -2.08
VPS45Q9NRW7 AC011604.1-201ENST00000545978 196 ntBASIC2.03□□□□□ -2.08
VPS45Q9NRW7 AC084364.2-201ENST00000546924 395 ntBASIC2.03□□□□□ -2.08
VPS45Q9NRW7 MIR4724-201ENST00000579485 89 ntBASIC2.03□□□□□ -2.08
VPS45Q9NRW7 Y_RNA.783-201ENST00000613546 102 ntBASIC2.03□□□□□ -2.08
VPS45Q9NRW7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.03□□□□□ -2.08
VPS45Q9NRW7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
VPS45Q9NRW7 AC068700.1-201ENST00000565862 3754 ntBASIC2.02□□□□□ -2.09
VPS45Q9NRW7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VPS45Q9NRW7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.02□□□□□ -2.09
VPS45Q9NRW7 MIR367-201ENST00000362299 68 ntBASIC2.02□□□□□ -2.09
VPS45Q9NRW7 RNU6-674P-201ENST00000363831 107 ntBASIC2.02□□□□□ -2.09
VPS45Q9NRW7 Y_RNA.508-201ENST00000384502 114 ntBASIC2.02□□□□□ -2.09
VPS45Q9NRW7 MIR626-201ENST00000385032 94 ntBASIC2.02□□□□□ -2.09
VPS45Q9NRW7 RNU6-360P-201ENST00000390944 104 ntBASIC2.02□□□□□ -2.09
VPS45Q9NRW7 Y_RNA.793-201ENST00000411222 111 ntBASIC2.02□□□□□ -2.09
VPS45Q9NRW7 RNU2-64P-201ENST00000411315 191 ntBASIC2.02□□□□□ -2.09
VPS45Q9NRW7 Z98949.2-201ENST00000440996 144 ntBASIC2.02□□□□□ -2.09
VPS45Q9NRW7 RNY3P16-201ENST00000516338 101 ntBASIC2.02□□□□□ -2.09
VPS45Q9NRW7 AL358944.1-201ENST00000528537 144 ntBASIC2.02□□□□□ -2.09
VPS45Q9NRW7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
VPS45Q9NRW7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VPS45Q9NRW7 Y_RNA.118-201ENST00000363300 101 ntBASIC2.01□□□□□ -2.09
VPS45Q9NRW7 RNU6-1020P-201ENST00000363684 107 ntBASIC2.01□□□□□ -2.09
VPS45Q9NRW7 RNU6-923P-201ENST00000364753 107 ntBASIC2.01□□□□□ -2.09
VPS45Q9NRW7 RNU4-17P-201ENST00000365598 141 ntBASIC2.01□□□□□ -2.09
VPS45Q9NRW7 RNU6-950P-201ENST00000384651 107 ntBASIC2.01□□□□□ -2.09
VPS45Q9NRW7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
VPS45Q9NRW7 AL445685.2-201ENST00000422551 342 ntBASIC2.01□□□□□ -2.09
VPS45Q9NRW7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS45Q9NRW7 AC233266.1-201ENST00000454518 96 ntBASIC2.01□□□□□ -2.09
VPS45Q9NRW7 RN7SL274P-201ENST00000492268 272 ntBASIC2.01□□□□□ -2.09
VPS45Q9NRW7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.01□□□□□ -2.09
VPS45Q9NRW7 SNORA31.17-201ENST00000516953 127 ntBASIC2.01□□□□□ -2.09
VPS45Q9NRW7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS45Q9NRW7 MIR5089-201ENST00000580047 84 ntBASIC2.01□□□□□ -2.09
VPS45Q9NRW7 AC242852.1-201ENST00000612151 96 ntBASIC2.01□□□□□ -2.09
VPS45Q9NRW7 AC244015.1-201ENST00000622301 99 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms