Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 SNORD56.5-201ENST00000364281 72 ntBASIC3.17□□□□□ -1.9
NEUROD4Q9HD90 SNORA80E-201ENST00000384744 137 ntBASIC3.17□□□□□ -1.9
NEUROD4Q9HD90 SNORA26.7-201ENST00000391288 122 ntBASIC3.17□□□□□ -1.9
NEUROD4Q9HD90 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.17□□□□□ -1.9
NEUROD4Q9HD90 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.17□□□□□ -1.9
NEUROD4Q9HD90 CST2P1-201ENST00000425770 87 ntBASIC3.17□□□□□ -1.9
NEUROD4Q9HD90 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.17□□□□□ -1.9
NEUROD4Q9HD90 RNU6-1116P-201ENST00000517269 99 ntBASIC3.17□□□□□ -1.9
NEUROD4Q9HD90 MIR4513-201ENST00000581077 86 ntBASIC3.17□□□□□ -1.9
NEUROD4Q9HD90 MIR4305-201ENST00000583252 102 ntBASIC3.17□□□□□ -1.9
NEUROD4Q9HD90 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NEUROD4Q9HD90 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.17□□□□□ -1.9
NEUROD4Q9HD90 AL356274.2-201ENST00000624379 3752 ntBASIC3.16□□□□□ -1.9
NEUROD4Q9HD90 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
NEUROD4Q9HD90 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.16□□□□□ -1.9
NEUROD4Q9HD90 MIR759-201ENST00000390224 91 ntBASIC3.16□□□□□ -1.9
NEUROD4Q9HD90 RNU7-70P-201ENST00000516941 66 ntBASIC3.16□□□□□ -1.9
NEUROD4Q9HD90 AC141557.1-201ENST00000540982 400 ntBASIC3.16□□□□□ -1.9
NEUROD4Q9HD90 MIR3169-201ENST00000578032 83 ntBASIC3.16□□□□□ -1.9
NEUROD4Q9HD90 Y_RNA.818-201ENST00000618813 71 ntBASIC3.16□□□□□ -1.9
NEUROD4Q9HD90 AC091932.4-201ENST00000623386 200 ntBASIC3.16□□□□□ -1.9
NEUROD4Q9HD90 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NEUROD4Q9HD90 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
NEUROD4Q9HD90 AC245060.5-201ENST00000610778 3293 ntBASIC3.16□□□□□ -1.9
NEUROD4Q9HD90 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
NEUROD4Q9HD90 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NEUROD4Q9HD90 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.15□□□□□ -1.9
NEUROD4Q9HD90 AL365361.1-201ENST00000566942 3481 ntBASIC3.15□□□□□ -1.9
NEUROD4Q9HD90 RNA5SP383-201ENST00000362934 120 ntBASIC3.15□□□□□ -1.91
NEUROD4Q9HD90 Y_RNA.265-201ENST00000364677 108 ntBASIC3.15□□□□□ -1.91
NEUROD4Q9HD90 Y_RNA.494-201ENST00000384432 111 ntBASIC3.15□□□□□ -1.91
NEUROD4Q9HD90 RNU6-160P-201ENST00000384591 107 ntBASIC3.15□□□□□ -1.91
NEUROD4Q9HD90 SNORA48.2-201ENST00000390926 124 ntBASIC3.15□□□□□ -1.91
NEUROD4Q9HD90 SNORD17-201ENST00000390930 237 ntBASIC3.15□□□□□ -1.91
NEUROD4Q9HD90 RNA5SP109-201ENST00000391010 116 ntBASIC3.15□□□□□ -1.91
NEUROD4Q9HD90 RNA5SP120-201ENST00000410900 112 ntBASIC3.15□□□□□ -1.91
NEUROD4Q9HD90 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.15□□□□□ -1.91
NEUROD4Q9HD90 RN7SL297P-201ENST00000483161 293 ntBASIC3.15□□□□□ -1.91
NEUROD4Q9HD90 SNORA31.26-201ENST00000517250 137 ntBASIC3.15□□□□□ -1.91
NEUROD4Q9HD90 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.15□□□□□ -1.91
NEUROD4Q9HD90 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NEUROD4Q9HD90 RNU4-35P-201ENST00000362588 141 ntBASIC3.14□□□□□ -1.91
NEUROD4Q9HD90 RNA5SP173-201ENST00000364857 136 ntBASIC3.14□□□□□ -1.91
NEUROD4Q9HD90 Y_RNA.336-201ENST00000365307 109 ntBASIC3.14□□□□□ -1.91
NEUROD4Q9HD90 RNU6-805P-201ENST00000365643 106 ntBASIC3.14□□□□□ -1.91
NEUROD4Q9HD90 MIR490-201ENST00000384865 128 ntBASIC3.14□□□□□ -1.91
NEUROD4Q9HD90 MIR515-2-201ENST00000384883 83 ntBASIC3.14□□□□□ -1.91
NEUROD4Q9HD90 MIR515-1-201ENST00000384884 83 ntBASIC3.14□□□□□ -1.91
NEUROD4Q9HD90 CST9LP2-201ENST00000437612 320 ntBASIC3.14□□□□□ -1.91
NEUROD4Q9HD90 AC107083.1-201ENST00000439643 279 ntBASIC3.14□□□□□ -1.91
NEUROD4Q9HD90 AC025518.1-201ENST00000479856 347 ntBASIC3.14□□□□□ -1.91
NEUROD4Q9HD90 AL049873.1-201ENST00000480540 376 ntBASIC3.14□□□□□ -1.91
NEUROD4Q9HD90 SNORA18.7-201ENST00000516910 131 ntBASIC3.14□□□□□ -1.91
NEUROD4Q9HD90 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.14□□□□□ -1.91
NEUROD4Q9HD90 AC015726.2-201ENST00000620112 122 ntBASIC3.14□□□□□ -1.91
NEUROD4Q9HD90 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NEUROD4Q9HD90 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NEUROD4Q9HD90 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NEUROD4Q9HD90 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.13□□□□□ -1.91
NEUROD4Q9HD90 RNU4-16P-201ENST00000364737 141 ntBASIC3.13□□□□□ -1.91
NEUROD4Q9HD90 RNU6-573P-201ENST00000383938 106 ntBASIC3.13□□□□□ -1.91
NEUROD4Q9HD90 MIR128-1-201ENST00000384921 82 ntBASIC3.13□□□□□ -1.91
NEUROD4Q9HD90 RNA5SP482-201ENST00000391269 118 ntBASIC3.13□□□□□ -1.91
NEUROD4Q9HD90 RPS3AP1-201ENST00000413190 320 ntBASIC3.13□□□□□ -1.91
NEUROD4Q9HD90 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.13□□□□□ -1.91
NEUROD4Q9HD90 AC114811.1-201ENST00000507207 168 ntBASIC3.13□□□□□ -1.91
NEUROD4Q9HD90 RNU6-158P-201ENST00000517104 100 ntBASIC3.13□□□□□ -1.91
NEUROD4Q9HD90 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.13□□□□□ -1.91
NEUROD4Q9HD90 uc_338.1-201ENST00000612113 180 ntBASIC3.13□□□□□ -1.91
NEUROD4Q9HD90 AL162726.3-218ENST00000636401 95 ntBASIC3.13□□□□□ -1.91
NEUROD4Q9HD90 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 RNU1-33P-201ENST00000364249 162 ntBASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 AC245047.3-201ENST00000429428 127 ntBASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 AC087499.4-201ENST00000448505 178 ntBASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 RNA5SP57-201ENST00000459463 123 ntBASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 RN7SL442P-201ENST00000473804 320 ntBASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 RPPH1-2P-201ENST00000516688 293 ntBASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 RNU7-6P-201ENST00000516845 62 ntBASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 IGKV2-26-201ENST00000518305 343 ntBASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 AC104027.1-201ENST00000521887 300 ntBASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 MIR3683-201ENST00000580847 82 ntBASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 MIR3163-201ENST00000581592 73 ntBASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 uc_338.25-201ENST00000613756 156 ntBASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 MALAT1.1-201ENST00000618249 95 ntBASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 AC087741.2-201ENST00000619415 172 ntBASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NEUROD4Q9HD90 MIRLET7C-201ENST00000362160 84 ntBASIC3.11□□□□□ -1.91
NEUROD4Q9HD90 MIR302B-201ENST00000362188 73 ntBASIC3.11□□□□□ -1.91
NEUROD4Q9HD90 MIR342-201ENST00000362212 99 ntBASIC3.11□□□□□ -1.91
NEUROD4Q9HD90 Y_RNA.342-201ENST00000365352 113 ntBASIC3.11□□□□□ -1.91
NEUROD4Q9HD90 RNA5SP492-201ENST00000411330 114 ntBASIC3.11□□□□□ -1.91
NEUROD4Q9HD90 RNU6-592P-201ENST00000411333 103 ntBASIC3.11□□□□□ -1.91
NEUROD4Q9HD90 RNU7-26P-201ENST00000458980 63 ntBASIC3.11□□□□□ -1.91
NEUROD4Q9HD90 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.11□□□□□ -1.91
NEUROD4Q9HD90 SNORA64.4-201ENST00000516632 81 ntBASIC3.11□□□□□ -1.91
NEUROD4Q9HD90 AC026271.5-201ENST00000577873 130 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms