Protein–RNA interactions for Protein: Q9HCE7

SMURF1, E3 ubiquitin-protein ligase SMURF1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1Q9HCE7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMURF1Q9HCE7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMURF1Q9HCE7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.37□□□□□ -2.03
SMURF1Q9HCE7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SMURF1Q9HCE7 SNORD14E-201ENST00000364009 85 ntBASIC2.37□□□□□ -2.03
SMURF1Q9HCE7 RNU6-442P-201ENST00000383968 104 ntBASIC2.37□□□□□ -2.03
SMURF1Q9HCE7 RNU6-1117P-201ENST00000384525 104 ntBASIC2.37□□□□□ -2.03
SMURF1Q9HCE7 RNU6-959P-201ENST00000384671 107 ntBASIC2.37□□□□□ -2.03
SMURF1Q9HCE7 MIR520A-201ENST00000384862 85 ntBASIC2.37□□□□□ -2.03
SMURF1Q9HCE7 Y_RNA.586-201ENST00000391146 98 ntBASIC2.37□□□□□ -2.03
SMURF1Q9HCE7 RNU6-588P-201ENST00000410281 105 ntBASIC2.37□□□□□ -2.03
SMURF1Q9HCE7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.37□□□□□ -2.03
SMURF1Q9HCE7 RPS12P2-201ENST00000439728 269 ntBASIC2.37□□□□□ -2.03
SMURF1Q9HCE7 STAG3L5P-204ENST00000443759 179 ntBASIC2.37□□□□□ -2.03
SMURF1Q9HCE7 RNVU1-2-201ENST00000516326 135 ntBASIC2.37□□□□□ -2.03
SMURF1Q9HCE7 RNA5SP367-201ENST00000516557 118 ntBASIC2.37□□□□□ -2.03
SMURF1Q9HCE7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.37□□□□□ -2.03
SMURF1Q9HCE7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
SMURF1Q9HCE7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.36□□□□□ -2.03
SMURF1Q9HCE7 SNORA80A-201ENST00000363922 136 ntBASIC2.36□□□□□ -2.03
SMURF1Q9HCE7 SNORD24-201ENST00000383884 75 ntBASIC2.36□□□□□ -2.03
SMURF1Q9HCE7 RNU6-1081P-201ENST00000384537 107 ntBASIC2.36□□□□□ -2.03
SMURF1Q9HCE7 SNORD72-201ENST00000390994 80 ntBASIC2.36□□□□□ -2.03
SMURF1Q9HCE7 AL034345.1-201ENST00000407768 123 ntBASIC2.36□□□□□ -2.03
SMURF1Q9HCE7 RNU6-257P-201ENST00000410238 98 ntBASIC2.36□□□□□ -2.03
SMURF1Q9HCE7 RNU2-7P-201ENST00000410794 178 ntBASIC2.36□□□□□ -2.03
SMURF1Q9HCE7 RNA5SP501-201ENST00000410990 112 ntBASIC2.36□□□□□ -2.03
SMURF1Q9HCE7 HMGN2P32-201ENST00000444648 269 ntBASIC2.36□□□□□ -2.03
SMURF1Q9HCE7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.36□□□□□ -2.03
SMURF1Q9HCE7 AC078899.2-201ENST00000595282 212 ntBASIC2.36□□□□□ -2.03
SMURF1Q9HCE7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.36□□□□□ -2.03
SMURF1Q9HCE7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
SMURF1Q9HCE7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.36□□□□□ -2.03
SMURF1Q9HCE7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMURF1Q9HCE7 AC007336.1-201ENST00000576365 3828 ntBASIC2.36□□□□□ -2.03
SMURF1Q9HCE7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.35□□□□□ -2.03
SMURF1Q9HCE7 Y_RNA.66-201ENST00000362862 102 ntBASIC2.35□□□□□ -2.03
SMURF1Q9HCE7 SNORA3A-201ENST00000364113 130 ntBASIC2.35□□□□□ -2.03
SMURF1Q9HCE7 Y_RNA.420-201ENST00000384043 110 ntBASIC2.35□□□□□ -2.03
SMURF1Q9HCE7 RNU1-138P-201ENST00000384093 164 ntBASIC2.35□□□□□ -2.03
SMURF1Q9HCE7 RNU7-197P-201ENST00000458836 62 ntBASIC2.35□□□□□ -2.03
SMURF1Q9HCE7 AC092991.1-201ENST00000477176 376 ntBASIC2.35□□□□□ -2.03
SMURF1Q9HCE7 SNORA31.11-201ENST00000516528 139 ntBASIC2.35□□□□□ -2.03
SMURF1Q9HCE7 SUB1P4-201ENST00000566062 339 ntBASIC2.35□□□□□ -2.03
SMURF1Q9HCE7 MIR4635-201ENST00000583759 79 ntBASIC2.35□□□□□ -2.03
SMURF1Q9HCE7 AC245884.12-201ENST00000615364 59 ntBASIC2.35□□□□□ -2.03
SMURF1Q9HCE7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.35□□□□□ -2.03
SMURF1Q9HCE7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
SMURF1Q9HCE7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
SMURF1Q9HCE7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SMURF1Q9HCE7 RNU6-1082P-201ENST00000364574 107 ntBASIC2.34□□□□□ -2.03
SMURF1Q9HCE7 SNORD50B-201ENST00000364995 70 ntBASIC2.34□□□□□ -2.03
SMURF1Q9HCE7 Y_RNA.336-201ENST00000365307 109 ntBASIC2.34□□□□□ -2.03
SMURF1Q9HCE7 Y_RNA.584-201ENST00000391090 114 ntBASIC2.34□□□□□ -2.03
SMURF1Q9HCE7 SNRPGP13-201ENST00000442212 177 ntBASIC2.34□□□□□ -2.03
SMURF1Q9HCE7 SNORA31.25-201ENST00000517242 134 ntBASIC2.34□□□□□ -2.03
SMURF1Q9HCE7 AC079600.2-201ENST00000550076 130 ntBASIC2.34□□□□□ -2.03
SMURF1Q9HCE7 AL365205.2-201ENST00000594586 68 ntBASIC2.34□□□□□ -2.03
SMURF1Q9HCE7 AL049779.4-201ENST00000604500 156 ntBASIC2.34□□□□□ -2.03
SMURF1Q9HCE7 MIR7106-201ENST00000612419 65 ntBASIC2.34□□□□□ -2.03
SMURF1Q9HCE7 TUG1_4.1-201ENST00000619464 181 ntBASIC2.34□□□□□ -2.03
SMURF1Q9HCE7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SMURF1Q9HCE7 RNU6-22P-201ENST00000384355 107 ntBASIC2.33□□□□□ -2.04
SMURF1Q9HCE7 Y_RNA.542-201ENST00000384641 111 ntBASIC2.33□□□□□ -2.04
SMURF1Q9HCE7 SNORA20-201ENST00000384662 132 ntBASIC2.33□□□□□ -2.04
SMURF1Q9HCE7 RNA5SP127-201ENST00000411051 133 ntBASIC2.33□□□□□ -2.04
SMURF1Q9HCE7 AC087499.2-201ENST00000432861 149 ntBASIC2.33□□□□□ -2.04
SMURF1Q9HCE7 AC105272.1-201ENST00000438604 198 ntBASIC2.33□□□□□ -2.04
SMURF1Q9HCE7 AC011753.1-201ENST00000451001 220 ntBASIC2.33□□□□□ -2.04
SMURF1Q9HCE7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.33□□□□□ -2.04
SMURF1Q9HCE7 RN7SKP132-201ENST00000516001 208 ntBASIC2.33□□□□□ -2.04
SMURF1Q9HCE7 SNORA18.4-201ENST00000516440 124 ntBASIC2.33□□□□□ -2.04
SMURF1Q9HCE7 SNORA31.10-201ENST00000516482 106 ntBASIC2.33□□□□□ -2.04
SMURF1Q9HCE7 SNORD45.4-201ENST00000516629 73 ntBASIC2.33□□□□□ -2.04
SMURF1Q9HCE7 RNA5SP481-201ENST00000516814 122 ntBASIC2.33□□□□□ -2.04
SMURF1Q9HCE7 MIR5092-201ENST00000583139 88 ntBASIC2.33□□□□□ -2.04
SMURF1Q9HCE7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.33□□□□□ -2.04
SMURF1Q9HCE7 AP001340.1-201ENST00000624405 217 ntBASIC2.33□□□□□ -2.04
SMURF1Q9HCE7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SMURF1Q9HCE7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
SMURF1Q9HCE7 RNU6-888P-201ENST00000363010 101 ntBASIC2.32□□□□□ -2.04
SMURF1Q9HCE7 MIR539-201ENST00000365690 78 ntBASIC2.32□□□□□ -2.04
SMURF1Q9HCE7 RNA5SP450-201ENST00000411206 102 ntBASIC2.32□□□□□ -2.04
SMURF1Q9HCE7 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.32□□□□□ -2.04
SMURF1Q9HCE7 CYCTP-201ENST00000504253 315 ntBASIC2.32□□□□□ -2.04
SMURF1Q9HCE7 RNU6-62P-201ENST00000516526 102 ntBASIC2.32□□□□□ -2.04
SMURF1Q9HCE7 RNU7-193P-201ENST00000516723 65 ntBASIC2.32□□□□□ -2.04
SMURF1Q9HCE7 AP001328.1-201ENST00000528550 176 ntBASIC2.32□□□□□ -2.04
SMURF1Q9HCE7 AC007751.1-201ENST00000529260 376 ntBASIC2.32□□□□□ -2.04
SMURF1Q9HCE7 GTF3AP2-201ENST00000557014 266 ntBASIC2.32□□□□□ -2.04
SMURF1Q9HCE7 AC131055.1-201ENST00000584626 316 ntBASIC2.32□□□□□ -2.04
SMURF1Q9HCE7 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.32□□□□□ -2.04
SMURF1Q9HCE7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SMURF1Q9HCE7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
SMURF1Q9HCE7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SMURF1Q9HCE7 RNU6-112P-201ENST00000363599 104 ntBASIC2.31□□□□□ -2.04
SMURF1Q9HCE7 Y_RNA.251-201ENST00000364551 99 ntBASIC2.31□□□□□ -2.04
SMURF1Q9HCE7 SNORD61-201ENST00000384252 73 ntBASIC2.31□□□□□ -2.04
SMURF1Q9HCE7 RNU6-163P-201ENST00000384396 106 ntBASIC2.31□□□□□ -2.04
SMURF1Q9HCE7 SNORA80E-201ENST00000384744 137 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms