Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 RPL23AP54-201ENST00000495129 419 ntBASIC1.11□□□□□ -2.23
VIPAS39Q9H9C1 AC022616.4-201ENST00000522985 181 ntBASIC1.11□□□□□ -2.23
VIPAS39Q9H9C1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.11□□□□□ -2.23
VIPAS39Q9H9C1 MIR4300-201ENST00000581016 96 ntBASIC1.11□□□□□ -2.23
VIPAS39Q9H9C1 AP000942.3-201ENST00000603702 160 ntBASIC1.11□□□□□ -2.23
VIPAS39Q9H9C1 SNORD113-5-201ENST00000607261 78 ntBASIC1.11□□□□□ -2.23
VIPAS39Q9H9C1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
VIPAS39Q9H9C1 RNU6-797P-201ENST00000363101 109 ntBASIC1.1□□□□□ -2.23
VIPAS39Q9H9C1 Y_RNA.105-201ENST00000363182 111 ntBASIC1.1□□□□□ -2.23
VIPAS39Q9H9C1 RNU6-1323P-201ENST00000384025 107 ntBASIC1.1□□□□□ -2.23
VIPAS39Q9H9C1 Y_RNA.527-201ENST00000384573 102 ntBASIC1.1□□□□□ -2.23
VIPAS39Q9H9C1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.1□□□□□ -2.23
VIPAS39Q9H9C1 MIR1278-201ENST00000408753 81 ntBASIC1.1□□□□□ -2.23
VIPAS39Q9H9C1 MIR1298-201ENST00000408783 112 ntBASIC1.1□□□□□ -2.23
VIPAS39Q9H9C1 AC009474.2-201ENST00000451383 136 ntBASIC1.1□□□□□ -2.23
VIPAS39Q9H9C1 SNORA31.2-201ENST00000516019 134 ntBASIC1.1□□□□□ -2.23
VIPAS39Q9H9C1 MIR4421-201ENST00000578133 69 ntBASIC1.1□□□□□ -2.23
VIPAS39Q9H9C1 MIR3171-201ENST00000584270 74 ntBASIC1.1□□□□□ -2.23
VIPAS39Q9H9C1 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
VIPAS39Q9H9C1 AC134503.1-201ENST00000633048 54 ntBASIC1.1□□□□□ -2.23
VIPAS39Q9H9C1 SNORD50B-201ENST00000364995 70 ntBASIC1.09□□□□□ -2.23
VIPAS39Q9H9C1 MIR222-201ENST00000384992 110 ntBASIC1.09□□□□□ -2.23
VIPAS39Q9H9C1 RNU6-131P-201ENST00000391144 107 ntBASIC1.09□□□□□ -2.23
VIPAS39Q9H9C1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.09□□□□□ -2.23
VIPAS39Q9H9C1 MIR548P-201ENST00000408336 84 ntBASIC1.09□□□□□ -2.23
VIPAS39Q9H9C1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.09□□□□□ -2.23
VIPAS39Q9H9C1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.09□□□□□ -2.23
VIPAS39Q9H9C1 RNU7-40P-201ENST00000516397 64 ntBASIC1.09□□□□□ -2.23
VIPAS39Q9H9C1 SNORD45.4-201ENST00000516629 73 ntBASIC1.09□□□□□ -2.23
VIPAS39Q9H9C1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.09□□□□□ -2.23
VIPAS39Q9H9C1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.09□□□□□ -2.23
VIPAS39Q9H9C1 AC027279.3-201ENST00000625055 122 ntBASIC1.09□□□□□ -2.23
VIPAS39Q9H9C1 Y_RNA.183-201ENST00000363882 113 ntBASIC1.08□□□□□ -2.24
VIPAS39Q9H9C1 U8.5-201ENST00000364528 136 ntBASIC1.08□□□□□ -2.24
VIPAS39Q9H9C1 RNU6-910P-201ENST00000390844 107 ntBASIC1.08□□□□□ -2.24
VIPAS39Q9H9C1 MIR1252-201ENST00000408861 65 ntBASIC1.08□□□□□ -2.24
VIPAS39Q9H9C1 RNU6-121P-201ENST00000410525 99 ntBASIC1.08□□□□□ -2.24
VIPAS39Q9H9C1 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
VIPAS39Q9H9C1 AC098869.1-201ENST00000481627 292 ntBASIC1.08□□□□□ -2.24
VIPAS39Q9H9C1 RNU7-115P-201ENST00000516433 55 ntBASIC1.08□□□□□ -2.24
VIPAS39Q9H9C1 RNU7-116P-201ENST00000516940 62 ntBASIC1.08□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.711-201ENST00000516993 102 ntBASIC1.08□□□□□ -2.24
VIPAS39Q9H9C1 MIR4762-201ENST00000585261 75 ntBASIC1.08□□□□□ -2.24
VIPAS39Q9H9C1 AP003357.1-201ENST00000604497 148 ntBASIC1.08□□□□□ -2.24
VIPAS39Q9H9C1 AL022345.2-201ENST00000606307 135 ntBASIC1.08□□□□□ -2.24
VIPAS39Q9H9C1 MIR548AY-201ENST00000617669 107 ntBASIC1.08□□□□□ -2.24
VIPAS39Q9H9C1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.08□□□□□ -2.24
VIPAS39Q9H9C1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 RNU6-801P-201ENST00000364087 105 ntBASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.203-201ENST00000364106 102 ntBASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 RNU6-806P-201ENST00000365147 105 ntBASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 SNORA63.7-201ENST00000365579 123 ntBASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.418-201ENST00000384029 102 ntBASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 SNORA25-201ENST00000384384 134 ntBASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 MTCO2P33-201ENST00000402100 465 ntBASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 BTF3P4-201ENST00000418852 495 ntBASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 HSPE1P25-201ENST00000455484 251 ntBASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 RPL39P39-201ENST00000455840 151 ntBASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 LINC01399-202ENST00000458450 244 ntBASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 RNU7-141P-201ENST00000459304 62 ntBASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 RNY3P15-201ENST00000516297 97 ntBASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 RNU6-1153P-201ENST00000516760 105 ntBASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 SNORA70.22-201ENST00000517160 124 ntBASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 AC020661.2-201ENST00000560114 134 ntBASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 BX284668.6-201ENST00000606899 438 ntBASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.07□□□□□ -2.24
VIPAS39Q9H9C1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.26-201ENST00000362539 101 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 SNORA7.1-201ENST00000363750 139 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 snoU2-30.1-201ENST00000365012 70 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.336-201ENST00000365307 109 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 MIR215-201ENST00000384858 110 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 MIR452-201ENST00000385020 85 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 SNORD115-46-201ENST00000390982 71 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 SNORA26.5-201ENST00000391215 123 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 ELOCP20-201ENST00000422460 345 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 RNU7-95P-201ENST00000459222 64 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 MRPS35P2-201ENST00000508242 191 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 RNU6-496P-201ENST00000516145 99 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 RNU6-191P-201ENST00000516295 94 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 SNORA40.15-201ENST00000516884 107 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.721-201ENST00000517207 102 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 AC090142.3-201ENST00000519012 385 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 AC131281.1-201ENST00000522984 164 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 AC127455.1-201ENST00000565496 145 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 AL096861.1-201ENST00000610899 123 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 JPX_2.1-201ENST00000614161 69 ntBASIC1.06□□□□□ -2.24
VIPAS39Q9H9C1 RNU6-1209P-201ENST00000363655 107 ntBASIC1.05□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.210-201ENST00000364161 110 ntBASIC1.05□□□□□ -2.24
VIPAS39Q9H9C1 SNORA70.7-201ENST00000384159 133 ntBASIC1.05□□□□□ -2.24
VIPAS39Q9H9C1 Y_RNA.569-201ENST00000384749 103 ntBASIC1.05□□□□□ -2.24
VIPAS39Q9H9C1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.05□□□□□ -2.24
VIPAS39Q9H9C1 SNORA36B-201ENST00000410438 131 ntBASIC1.05□□□□□ -2.24
VIPAS39Q9H9C1 AC245047.7-201ENST00000440265 293 ntBASIC1.05□□□□□ -2.24
VIPAS39Q9H9C1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.05□□□□□ -2.24
VIPAS39Q9H9C1 SNORD111.1-201ENST00000516421 86 ntBASIC1.05□□□□□ -2.24
VIPAS39Q9H9C1 SNORA18.7-201ENST00000516910 131 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 249 ms