Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 RNU6-743P-201ENST00000364151 106 ntBASIC2.7□□□□□ -1.98
BCAS3Q9H6U6 RNU6-1292P-201ENST00000383856 107 ntBASIC2.7□□□□□ -1.98
BCAS3Q9H6U6 Y_RNA.486-201ENST00000384398 107 ntBASIC2.7□□□□□ -1.98
BCAS3Q9H6U6 MIR561-201ENST00000385216 97 ntBASIC2.7□□□□□ -1.98
BCAS3Q9H6U6 MIRLET7F2-201ENST00000385277 83 ntBASIC2.7□□□□□ -1.98
BCAS3Q9H6U6 MIR1253-201ENST00000408273 105 ntBASIC2.7□□□□□ -1.98
BCAS3Q9H6U6 RNU2-63P-201ENST00000410792 194 ntBASIC2.7□□□□□ -1.98
BCAS3Q9H6U6 RNU1-131P-201ENST00000458943 161 ntBASIC2.7□□□□□ -1.98
BCAS3Q9H6U6 RN7SL499P-201ENST00000481141 276 ntBASIC2.7□□□□□ -1.98
BCAS3Q9H6U6 NDUFA4P2-201ENST00000489989 244 ntBASIC2.7□□□□□ -1.98
BCAS3Q9H6U6 AC018868.1-201ENST00000491307 315 ntBASIC2.7□□□□□ -1.98
BCAS3Q9H6U6 AC011406.1-201ENST00000512440 370 ntBASIC2.7□□□□□ -1.98
BCAS3Q9H6U6 RNA5SP281-201ENST00000516504 135 ntBASIC2.7□□□□□ -1.98
BCAS3Q9H6U6 AC007751.1-201ENST00000529260 376 ntBASIC2.7□□□□□ -1.98
BCAS3Q9H6U6 AC015712.3-201ENST00000559380 164 ntBASIC2.7□□□□□ -1.98
BCAS3Q9H6U6 AC087685.1-201ENST00000587507 141 ntBASIC2.7□□□□□ -1.98
BCAS3Q9H6U6 AC018630.2-201ENST00000534866 2403 ntBASIC2.7□□□□□ -1.98
BCAS3Q9H6U6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
BCAS3Q9H6U6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
BCAS3Q9H6U6 RNU6-235P-201ENST00000362644 107 ntBASIC2.69□□□□□ -1.98
BCAS3Q9H6U6 RNU6-647P-201ENST00000364243 107 ntBASIC2.69□□□□□ -1.98
BCAS3Q9H6U6 RNA5SP127-201ENST00000411051 133 ntBASIC2.69□□□□□ -1.98
BCAS3Q9H6U6 SRIP3-201ENST00000413200 219 ntBASIC2.69□□□□□ -1.98
BCAS3Q9H6U6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.69□□□□□ -1.98
BCAS3Q9H6U6 AC108210.2-201ENST00000503681 201 ntBASIC2.69□□□□□ -1.98
BCAS3Q9H6U6 RNU6-365P-201ENST00000517113 106 ntBASIC2.69□□□□□ -1.98
BCAS3Q9H6U6 JPX_2.1-201ENST00000614161 69 ntBASIC2.69□□□□□ -1.98
BCAS3Q9H6U6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
BCAS3Q9H6U6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
BCAS3Q9H6U6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
BCAS3Q9H6U6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
BCAS3Q9H6U6 Y_RNA.242-201ENST00000364473 110 ntBASIC2.68□□□□□ -1.98
BCAS3Q9H6U6 SNORD24-201ENST00000383884 75 ntBASIC2.68□□□□□ -1.98
BCAS3Q9H6U6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.68□□□□□ -1.98
BCAS3Q9H6U6 MLLT10P1-201ENST00000418346 262 ntBASIC2.68□□□□□ -1.98
BCAS3Q9H6U6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.68□□□□□ -1.98
BCAS3Q9H6U6 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.68□□□□□ -1.98
BCAS3Q9H6U6 HMGN1P7-201ENST00000491722 313 ntBASIC2.68□□□□□ -1.98
BCAS3Q9H6U6 RNU6-991P-201ENST00000516168 107 ntBASIC2.68□□□□□ -1.98
BCAS3Q9H6U6 RNU6-504P-201ENST00000516568 104 ntBASIC2.68□□□□□ -1.98
BCAS3Q9H6U6 RNU6-341P-201ENST00000516973 96 ntBASIC2.68□□□□□ -1.98
BCAS3Q9H6U6 MIR4648-201ENST00000580107 72 ntBASIC2.68□□□□□ -1.98
BCAS3Q9H6U6 AC073413.2-201ENST00000604332 360 ntBASIC2.68□□□□□ -1.98
BCAS3Q9H6U6 U6.108-201ENST00000637764 58 ntBASIC2.68□□□□□ -1.98
BCAS3Q9H6U6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
BCAS3Q9H6U6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
BCAS3Q9H6U6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.67□□□□□ -1.98
BCAS3Q9H6U6 Y_RNA.52-201ENST00000362760 96 ntBASIC2.67□□□□□ -1.98
BCAS3Q9H6U6 SNORA25.6-201ENST00000364121 118 ntBASIC2.67□□□□□ -1.98
BCAS3Q9H6U6 SNORD58C-201ENST00000365223 64 ntBASIC2.67□□□□□ -1.98
BCAS3Q9H6U6 SNORD18B-201ENST00000365659 72 ntBASIC2.67□□□□□ -1.98
BCAS3Q9H6U6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.67□□□□□ -1.98
BCAS3Q9H6U6 RPS29P12-201ENST00000460178 152 ntBASIC2.67□□□□□ -1.98
BCAS3Q9H6U6 RPS26P45-201ENST00000471748 340 ntBASIC2.67□□□□□ -1.98
BCAS3Q9H6U6 Y_RNA.690-201ENST00000516603 95 ntBASIC2.67□□□□□ -1.98
BCAS3Q9H6U6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.67□□□□□ -1.98
BCAS3Q9H6U6 MIR6129-201ENST00000616087 109 ntBASIC2.67□□□□□ -1.98
BCAS3Q9H6U6 MIR338-201ENST00000636369 67 ntBASIC2.67□□□□□ -1.98
BCAS3Q9H6U6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.67□□□□□ -1.98
BCAS3Q9H6U6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 RNU6-888P-201ENST00000363010 101 ntBASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 Y_RNA.99-201ENST00000363138 105 ntBASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 RNU1-51P-201ENST00000365345 176 ntBASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 RNU6-220P-201ENST00000390919 107 ntBASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 RN7SKP223-201ENST00000410582 62 ntBASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 AC063976.4-201ENST00000421971 163 ntBASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 RPS15AP28-201ENST00000435088 386 ntBASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 CKS1BP2-201ENST00000497342 240 ntBASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 CYCTP-201ENST00000504253 315 ntBASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 RNA5SP236-201ENST00000516169 116 ntBASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 MIR5092-201ENST00000583139 88 ntBASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 AC008507.4-201ENST00000585464 127 ntBASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 AL359075.3-201ENST00000613288 217 ntBASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 MIR1291-201ENST00000627649 87 ntBASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 AC016717.2-201ENST00000609089 5141 ntBASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
BCAS3Q9H6U6 Y_RNA.253-201ENST00000364562 112 ntBASIC2.65□□□□□ -1.99
BCAS3Q9H6U6 MIR515-2-201ENST00000384883 83 ntBASIC2.65□□□□□ -1.99
BCAS3Q9H6U6 MIR515-1-201ENST00000384884 83 ntBASIC2.65□□□□□ -1.99
BCAS3Q9H6U6 AL117342.1-201ENST00000404861 406 ntBASIC2.65□□□□□ -1.99
BCAS3Q9H6U6 AC007064.1-201ENST00000412238 351 ntBASIC2.65□□□□□ -1.99
BCAS3Q9H6U6 MTATP6P21-201ENST00000440681 189 ntBASIC2.65□□□□□ -1.99
BCAS3Q9H6U6 MRPS17P9-201ENST00000511924 393 ntBASIC2.65□□□□□ -1.99
BCAS3Q9H6U6 SNORA18.4-201ENST00000516440 124 ntBASIC2.65□□□□□ -1.99
BCAS3Q9H6U6 AL355297.2-201ENST00000604792 129 ntBASIC2.65□□□□□ -1.99
BCAS3Q9H6U6 MIR6079-201ENST00000635807 62 ntBASIC2.65□□□□□ -1.99
BCAS3Q9H6U6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.65□□□□□ -1.99
BCAS3Q9H6U6 RNU6-309P-201ENST00000364573 106 ntBASIC2.64□□□□□ -1.99
BCAS3Q9H6U6 AC104389.3-201ENST00000445629 235 ntBASIC2.64□□□□□ -1.99
BCAS3Q9H6U6 Y_RNA.651-201ENST00000459380 103 ntBASIC2.64□□□□□ -1.99
BCAS3Q9H6U6 RNU6-667P-201ENST00000517186 102 ntBASIC2.64□□□□□ -1.99
BCAS3Q9H6U6 AC024995.1-201ENST00000523014 93 ntBASIC2.64□□□□□ -1.99
BCAS3Q9H6U6 AL670379.3-201ENST00000605040 251 ntBASIC2.64□□□□□ -1.99
BCAS3Q9H6U6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.63□□□□□ -1.99
BCAS3Q9H6U6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
BCAS3Q9H6U6 Y_RNA.630-201ENST00000411370 108 ntBASIC2.63□□□□□ -1.99
BCAS3Q9H6U6 AL356320.1-201ENST00000429616 163 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms