Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC124312.5-201ENST00000604451 268 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 AC005972.2-201ENST00000604690 348 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 AL365434.2-201ENST00000607979 234 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 AC242852.1-201ENST00000612151 96 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 MIR6788-201ENST00000618842 66 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 AC244015.1-201ENST00000622301 99 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 SNORD3E-202ENST00000627253 216 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
NXF3Q9H4D5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
NXF3Q9H4D5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.99□□□□□ -2.25
NXF3Q9H4D5 MIRLET7C-201ENST00000362160 84 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.183-201ENST00000363882 113 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 SNORA22B-201ENST00000383876 138 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 U8.16-201ENST00000391279 133 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 MIR1252-201ENST00000408861 65 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 RNU4-30P-201ENST00000410245 143 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 MTCO2P12-201ENST00000427426 682 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 CALM2P4-201ENST00000430810 426 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 Z98949.2-201ENST00000440996 144 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.99□□□□□ -2.25
NXF3Q9H4D5 RPS20P10-201ENST00000451209 253 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 snoU13.18-201ENST00000459483 104 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 RPL39P38-201ENST00000467018 153 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 AL133373.1-201ENST00000497098 94 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 SEPT14P8-201ENST00000508026 178 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 RNU6-397P-201ENST00000516226 104 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 AC020661.2-201ENST00000560114 134 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 CYP3A52P-201ENST00000563326 91 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 AC136932.1-201ENST00000574771 208 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 MIR4778-201ENST00000577635 80 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 MIR3145-201ENST00000580727 82 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 MIR151B-201ENST00000584249 96 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.99□□□□□ -2.25
NXF3Q9H4D5 AC106754.2-201ENST00000623006 233 ntBASIC0.99□□□□□ -2.25
NXF3Q9H4D5 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.99□□□□□ -2.25
NXF3Q9H4D5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
NXF3Q9H4D5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
NXF3Q9H4D5 RNU4-41P-201ENST00000364426 143 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.310-201ENST00000365063 113 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.368-201ENST00000365547 113 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.380-201ENST00000365663 111 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 AC117470.1-201ENST00000381974 330 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 SNORA22-201ENST00000383907 134 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.389-201ENST00000383924 113 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 RNU6-1323P-201ENST00000384025 107 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 RNU6-42P-201ENST00000384165 107 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.456-201ENST00000384232 111 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 SNORA22C-201ENST00000384614 134 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 RNU6-21P-201ENST00000384710 107 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
NXF3Q9H4D5 SNORD115-46-201ENST00000390982 71 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 RNU6-101P-201ENST00000410323 104 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 HMGN1P10-201ENST00000474557 553 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 RNU6-1046P-201ENST00000516538 107 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 RNU6-1153P-201ENST00000516760 105 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 RN7SKP88-201ENST00000516847 250 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 RNU6-1116P-201ENST00000517269 99 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 MIR3171-201ENST00000584270 74 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 DEFB117-201ENST00000602356 141 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 SNORD113-5-201ENST00000607261 78 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 7SK.8-201ENST00000612110 250 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 7SK.11-201ENST00000615477 250 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 7SK.13-201ENST00000622040 250 ntBASIC0.98□□□□□ -2.25
NXF3Q9H4D5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
NXF3Q9H4D5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.222-201ENST00000364264 102 ntBASIC0.97□□□□□ -2.25
NXF3Q9H4D5 RNU4-76P-201ENST00000364509 141 ntBASIC0.97□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.286-201ENST00000364813 102 ntBASIC0.97□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.341-201ENST00000365341 102 ntBASIC0.97□□□□□ -2.25
NXF3Q9H4D5 SNORA72-201ENST00000384339 132 ntBASIC0.97□□□□□ -2.25
NXF3Q9H4D5 MIR653-201ENST00000385279 96 ntBASIC0.97□□□□□ -2.25
NXF3Q9H4D5 AC024067.1-201ENST00000426199 223 ntBASIC0.97□□□□□ -2.25
NXF3Q9H4D5 DYNLT3P2-201ENST00000442517 295 ntBASIC0.97□□□□□ -2.25
NXF3Q9H4D5 AC093850.1-201ENST00000454121 251 ntBASIC0.97□□□□□ -2.25
NXF3Q9H4D5 U8.19-201ENST00000459095 133 ntBASIC0.97□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.701-201ENST00000516812 110 ntBASIC0.97□□□□□ -2.25
NXF3Q9H4D5 RNA5SP404-201ENST00000517118 132 ntBASIC0.97□□□□□ -2.25
NXF3Q9H4D5 MIR3664-201ENST00000579074 99 ntBASIC0.97□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.11-201ENST00000362375 109 ntBASIC0.96□□□□□ -2.26
NXF3Q9H4D5 RNU6-199P-201ENST00000362954 107 ntBASIC0.96□□□□□ -2.26
NXF3Q9H4D5 Y_RNA.105-201ENST00000363182 111 ntBASIC0.96□□□□□ -2.26
NXF3Q9H4D5 Y_RNA.158-201ENST00000363651 101 ntBASIC0.96□□□□□ -2.26
NXF3Q9H4D5 U8.5-201ENST00000364528 136 ntBASIC0.96□□□□□ -2.26
NXF3Q9H4D5 RNU6-1105P-201ENST00000384774 107 ntBASIC0.96□□□□□ -2.26
NXF3Q9H4D5 MIR489-201ENST00000384923 84 ntBASIC0.96□□□□□ -2.26
NXF3Q9H4D5 AL590004.1-201ENST00000405321 300 ntBASIC0.96□□□□□ -2.26
NXF3Q9H4D5 RNU6-855P-201ENST00000410395 104 ntBASIC0.96□□□□□ -2.26
NXF3Q9H4D5 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.96□□□□□ -2.26
NXF3Q9H4D5 MTCYBP6-201ENST00000441810 138 ntBASIC0.96□□□□□ -2.26
NXF3Q9H4D5 AC092991.1-201ENST00000477176 376 ntBASIC0.96□□□□□ -2.26
NXF3Q9H4D5 RNU6-897P-201ENST00000517135 105 ntBASIC0.96□□□□□ -2.26
NXF3Q9H4D5 MIR4762-201ENST00000585261 75 ntBASIC0.96□□□□□ -2.26
NXF3Q9H4D5 AL513534.2-201ENST00000603836 250 ntBASIC0.96□□□□□ -2.26
NXF3Q9H4D5 RAC1P9-201ENST00000604990 392 ntBASIC0.96□□□□□ -2.26
NXF3Q9H4D5 MIR376A1-201ENST00000616574 68 ntBASIC0.96□□□□□ -2.26
NXF3Q9H4D5 MIR6734-201ENST00000621166 68 ntBASIC0.96□□□□□ -2.26
NXF3Q9H4D5 AC027279.3-201ENST00000625055 122 ntBASIC0.96□□□□□ -2.26
NXF3Q9H4D5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms