Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 Y_RNA.164-201ENST00000363709 102 ntBASIC1.15□□□□□ -2.23
UBQLN3Q9H347 U8.5-201ENST00000364528 136 ntBASIC1.15□□□□□ -2.23
UBQLN3Q9H347 Y_RNA.368-201ENST00000365547 113 ntBASIC1.15□□□□□ -2.23
UBQLN3Q9H347 SNORA63.7-201ENST00000365579 123 ntBASIC1.15□□□□□ -2.23
UBQLN3Q9H347 RNU6-1323P-201ENST00000384025 107 ntBASIC1.15□□□□□ -2.23
UBQLN3Q9H347 MIR526A1-201ENST00000384897 85 ntBASIC1.15□□□□□ -2.23
UBQLN3Q9H347 MIR522-201ENST00000385071 87 ntBASIC1.15□□□□□ -2.23
UBQLN3Q9H347 RNU6-823P-201ENST00000391042 103 ntBASIC1.15□□□□□ -2.23
UBQLN3Q9H347 AC117454.1-201ENST00000491120 168 ntBASIC1.15□□□□□ -2.23
UBQLN3Q9H347 HMGN1P7-201ENST00000491722 313 ntBASIC1.15□□□□□ -2.23
UBQLN3Q9H347 RNU7-116P-201ENST00000516940 62 ntBASIC1.15□□□□□ -2.23
UBQLN3Q9H347 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.15□□□□□ -2.23
UBQLN3Q9H347 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.15□□□□□ -2.23
UBQLN3Q9H347 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.15□□□□□ -2.23
UBQLN3Q9H347 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.15□□□□□ -2.23
UBQLN3Q9H347 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
UBQLN3Q9H347 Y_RNA.138-201ENST00000363462 102 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 U8.7-201ENST00000364940 136 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 RNU6-131P-201ENST00000391144 107 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 SNRPGP10-201ENST00000432323 225 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 U8.19-201ENST00000459095 133 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 HMGN1P10-201ENST00000474557 553 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 RPL23AP54-201ENST00000495129 419 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 AL133373.1-201ENST00000497098 94 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 RN7SKP179-201ENST00000516126 217 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 Y_RNA.721-201ENST00000517207 102 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 AC090821.2-201ENST00000523552 176 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 AC024405.2-202ENST00000532731 184 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 MIR4300-201ENST00000581016 96 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 MIR4781-201ENST00000585250 76 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 MIR4762-201ENST00000585261 75 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 AL357312.1-201ENST00000603879 298 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 RAC1P9-201ENST00000604990 392 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 AC134503.1-201ENST00000633048 54 ntBASIC1.14□□□□□ -2.23
UBQLN3Q9H347 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.14□□□□□ -2.23
UBQLN3Q9H347 Y_RNA.183-201ENST00000363882 113 ntBASIC1.13□□□□□ -2.23
UBQLN3Q9H347 SNORA22B-201ENST00000383876 138 ntBASIC1.13□□□□□ -2.23
UBQLN3Q9H347 MIR222-201ENST00000384992 110 ntBASIC1.13□□□□□ -2.23
UBQLN3Q9H347 MIR452-201ENST00000385020 85 ntBASIC1.13□□□□□ -2.23
UBQLN3Q9H347 MIR1298-201ENST00000408783 112 ntBASIC1.13□□□□□ -2.23
UBQLN3Q9H347 RPL39P39-201ENST00000455840 151 ntBASIC1.13□□□□□ -2.23
UBQLN3Q9H347 SNORA31.2-201ENST00000516019 134 ntBASIC1.13□□□□□ -2.23
UBQLN3Q9H347 SNORD45.4-201ENST00000516629 73 ntBASIC1.13□□□□□ -2.23
UBQLN3Q9H347 Y_RNA.714-201ENST00000517065 90 ntBASIC1.13□□□□□ -2.23
UBQLN3Q9H347 RNU6-897P-201ENST00000517135 105 ntBASIC1.13□□□□□ -2.23
UBQLN3Q9H347 AP003357.1-201ENST00000604497 148 ntBASIC1.13□□□□□ -2.23
UBQLN3Q9H347 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.13□□□□□ -2.23
UBQLN3Q9H347 snoU2-30.1-201ENST00000365012 70 ntBASIC1.12□□□□□ -2.23
UBQLN3Q9H347 RNU6-53P-201ENST00000365367 106 ntBASIC1.12□□□□□ -2.23
UBQLN3Q9H347 SNORA25-201ENST00000384384 134 ntBASIC1.12□□□□□ -2.23
UBQLN3Q9H347 MIR516B2-201ENST00000385190 85 ntBASIC1.12□□□□□ -2.23
UBQLN3Q9H347 MIR1252-201ENST00000408861 65 ntBASIC1.12□□□□□ -2.23
UBQLN3Q9H347 LINC01399-202ENST00000458450 244 ntBASIC1.12□□□□□ -2.23
UBQLN3Q9H347 AC048334.1-201ENST00000477975 159 ntBASIC1.12□□□□□ -2.23
UBQLN3Q9H347 MIR548AY-201ENST00000617669 107 ntBASIC1.12□□□□□ -2.23
UBQLN3Q9H347 MIR337-201ENST00000362281 93 ntBASIC1.11□□□□□ -2.23
UBQLN3Q9H347 RNU6-1048P-201ENST00000364054 107 ntBASIC1.11□□□□□ -2.23
UBQLN3Q9H347 Y_RNA.203-201ENST00000364106 102 ntBASIC1.11□□□□□ -2.23
UBQLN3Q9H347 RNU6-102P-201ENST00000384485 104 ntBASIC1.11□□□□□ -2.23
UBQLN3Q9H347 RNU6-1248P-201ENST00000391096 64 ntBASIC1.11□□□□□ -2.23
UBQLN3Q9H347 MIR548P-201ENST00000408336 84 ntBASIC1.11□□□□□ -2.23
UBQLN3Q9H347 RNU7-115P-201ENST00000516433 55 ntBASIC1.11□□□□□ -2.23
UBQLN3Q9H347 SNORA40.15-201ENST00000516884 107 ntBASIC1.11□□□□□ -2.23
UBQLN3Q9H347 SNORA70.22-201ENST00000517160 124 ntBASIC1.11□□□□□ -2.23
UBQLN3Q9H347 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.11□□□□□ -2.23
UBQLN3Q9H347 AL022345.2-201ENST00000606307 135 ntBASIC1.11□□□□□ -2.23
UBQLN3Q9H347 BX284668.6-201ENST00000606899 438 ntBASIC1.11□□□□□ -2.23
UBQLN3Q9H347 MIR6078-201ENST00000611069 100 ntBASIC1.11□□□□□ -2.23
UBQLN3Q9H347 JPX_2.1-201ENST00000614161 69 ntBASIC1.11□□□□□ -2.23
UBQLN3Q9H347 Y_RNA.216-201ENST00000364205 93 ntBASIC1.1□□□□□ -2.23
UBQLN3Q9H347 Y_RNA.238-201ENST00000364441 102 ntBASIC1.1□□□□□ -2.23
UBQLN3Q9H347 SNORD50B-201ENST00000364995 70 ntBASIC1.1□□□□□ -2.23
UBQLN3Q9H347 Y_RNA.336-201ENST00000365307 109 ntBASIC1.1□□□□□ -2.23
UBQLN3Q9H347 SNORA70.7-201ENST00000384159 133 ntBASIC1.1□□□□□ -2.23
UBQLN3Q9H347 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
UBQLN3Q9H347 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
UBQLN3Q9H347 RNU6-910P-201ENST00000390844 107 ntBASIC1.1□□□□□ -2.23
UBQLN3Q9H347 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.1□□□□□ -2.23
UBQLN3Q9H347 SNORA31.4-201ENST00000516049 129 ntBASIC1.1□□□□□ -2.23
UBQLN3Q9H347 Y_RNA.711-201ENST00000516993 102 ntBASIC1.1□□□□□ -2.23
UBQLN3Q9H347 AC136628.3-201ENST00000521868 290 ntBASIC1.1□□□□□ -2.23
UBQLN3Q9H347 AC127455.1-201ENST00000565496 145 ntBASIC1.1□□□□□ -2.23
UBQLN3Q9H347 MIR3171-201ENST00000584270 74 ntBASIC1.1□□□□□ -2.23
UBQLN3Q9H347 AC134026.1-201ENST00000623249 2239 ntBASIC1.09□□□□□ -2.23
UBQLN3Q9H347 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
UBQLN3Q9H347 Y_RNA.380-201ENST00000365663 111 ntBASIC1.09□□□□□ -2.23
UBQLN3Q9H347 Y_RNA.527-201ENST00000384573 102 ntBASIC1.09□□□□□ -2.23
UBQLN3Q9H347 SNORD115-46-201ENST00000390982 71 ntBASIC1.09□□□□□ -2.23
UBQLN3Q9H347 RNU7-141P-201ENST00000459304 62 ntBASIC1.09□□□□□ -2.23
UBQLN3Q9H347 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.09□□□□□ -2.23
UBQLN3Q9H347 RNA5SP404-201ENST00000517118 132 ntBASIC1.09□□□□□ -2.23
UBQLN3Q9H347 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
UBQLN3Q9H347 RNU4-90P-201ENST00000362773 141 ntBASIC1.08□□□□□ -2.24
UBQLN3Q9H347 Y_RNA.418-201ENST00000384029 102 ntBASIC1.08□□□□□ -2.24
UBQLN3Q9H347 Y_RNA.569-201ENST00000384749 103 ntBASIC1.08□□□□□ -2.24
UBQLN3Q9H347 MIR136-201ENST00000385207 82 ntBASIC1.08□□□□□ -2.24
UBQLN3Q9H347 MIR802-201ENST00000390235 94 ntBASIC1.08□□□□□ -2.24
UBQLN3Q9H347 SNORA36B-201ENST00000410438 131 ntBASIC1.08□□□□□ -2.24
UBQLN3Q9H347 RNU2-14P-201ENST00000411053 191 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms