Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AL034345.1-201ENST00000407768 123 ntBASIC2.51□□□□□ -2.01
TRIM55Q9BYV6 FTH1P12-201ENST00000432137 551 ntBASIC2.51□□□□□ -2.01
TRIM55Q9BYV6 SNORD77.4-201ENST00000516158 81 ntBASIC2.51□□□□□ -2.01
TRIM55Q9BYV6 RNU1-41P-201ENST00000516161 162 ntBASIC2.51□□□□□ -2.01
TRIM55Q9BYV6 RNU1-48P-201ENST00000516400 162 ntBASIC2.51□□□□□ -2.01
TRIM55Q9BYV6 Y_RNA.714-201ENST00000517065 90 ntBASIC2.51□□□□□ -2.01
TRIM55Q9BYV6 MIR4709-201ENST00000577272 72 ntBASIC2.51□□□□□ -2.01
TRIM55Q9BYV6 MIR4287-201ENST00000579398 78 ntBASIC2.51□□□□□ -2.01
TRIM55Q9BYV6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.51□□□□□ -2.01
TRIM55Q9BYV6 AL590808.1-201ENST00000618696 141 ntBASIC2.51□□□□□ -2.01
TRIM55Q9BYV6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM55Q9BYV6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM55Q9BYV6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
TRIM55Q9BYV6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.5□□□□□ -2.01
TRIM55Q9BYV6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
TRIM55Q9BYV6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM55Q9BYV6 RNU6-312P-201ENST00000364629 107 ntBASIC2.5□□□□□ -2.01
TRIM55Q9BYV6 RNU6-728P-201ENST00000365375 104 ntBASIC2.5□□□□□ -2.01
TRIM55Q9BYV6 SNORA67.4-201ENST00000384688 142 ntBASIC2.5□□□□□ -2.01
TRIM55Q9BYV6 RNA5SP212-201ENST00000391223 107 ntBASIC2.5□□□□□ -2.01
TRIM55Q9BYV6 Y_RNA.622-201ENST00000411091 108 ntBASIC2.5□□□□□ -2.01
TRIM55Q9BYV6 AL121914.1-201ENST00000450188 156 ntBASIC2.5□□□□□ -2.01
TRIM55Q9BYV6 AC096725.1-201ENST00000514266 313 ntBASIC2.5□□□□□ -2.01
TRIM55Q9BYV6 MIR3133-201ENST00000583157 78 ntBASIC2.5□□□□□ -2.01
TRIM55Q9BYV6 AC087685.1-201ENST00000587507 141 ntBASIC2.5□□□□□ -2.01
TRIM55Q9BYV6 AC021753.1-201ENST00000635724 168 ntBASIC2.5□□□□□ -2.01
TRIM55Q9BYV6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.5□□□□□ -2.01
TRIM55Q9BYV6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.5□□□□□ -2.01
TRIM55Q9BYV6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM55Q9BYV6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM55Q9BYV6 SNORD45.3-201ENST00000363836 72 ntBASIC2.49□□□□□ -2.01
TRIM55Q9BYV6 MIR15B-201ENST00000385045 98 ntBASIC2.49□□□□□ -2.01
TRIM55Q9BYV6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM55Q9BYV6 RNU7-149P-201ENST00000516739 59 ntBASIC2.49□□□□□ -2.01
TRIM55Q9BYV6 AL773524.1-201ENST00000614065 229 ntBASIC2.49□□□□□ -2.01
TRIM55Q9BYV6 MIR203B-201ENST00000636080 86 ntBASIC2.49□□□□□ -2.01
TRIM55Q9BYV6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM55Q9BYV6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM55Q9BYV6 SNORA70B-201ENST00000384210 135 ntBASIC2.48□□□□□ -2.01
TRIM55Q9BYV6 RNU6-804P-201ENST00000384286 107 ntBASIC2.48□□□□□ -2.01
TRIM55Q9BYV6 RNU5E-9P-201ENST00000411164 104 ntBASIC2.48□□□□□ -2.01
TRIM55Q9BYV6 AC244636.1-201ENST00000421152 228 ntBASIC2.48□□□□□ -2.01
TRIM55Q9BYV6 SEPT7P4-201ENST00000437076 306 ntBASIC2.48□□□□□ -2.01
TRIM55Q9BYV6 SNRPGP8-201ENST00000454064 226 ntBASIC2.48□□□□□ -2.01
TRIM55Q9BYV6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM55Q9BYV6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM55Q9BYV6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM55Q9BYV6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM55Q9BYV6 SNORD53-201ENST00000579969 78 ntBASIC2.48□□□□□ -2.01
TRIM55Q9BYV6 AC008507.4-201ENST00000585464 127 ntBASIC2.48□□□□□ -2.01
TRIM55Q9BYV6 AC021506.2-201ENST00000612354 169 ntBASIC2.48□□□□□ -2.01
TRIM55Q9BYV6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.48□□□□□ -2.01
TRIM55Q9BYV6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TRIM55Q9BYV6 MIRLET7C-201ENST00000362160 84 ntBASIC2.47□□□□□ -2.01
TRIM55Q9BYV6 RNU6-1138P-201ENST00000365359 106 ntBASIC2.47□□□□□ -2.01
TRIM55Q9BYV6 RNU6-484P-201ENST00000384016 107 ntBASIC2.47□□□□□ -2.01
TRIM55Q9BYV6 MIR17-201ENST00000385012 84 ntBASIC2.47□□□□□ -2.01
TRIM55Q9BYV6 RNU2-55P-201ENST00000411146 174 ntBASIC2.47□□□□□ -2.01
TRIM55Q9BYV6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM55Q9BYV6 CALM2P4-201ENST00000430810 426 ntBASIC2.47□□□□□ -2.01
TRIM55Q9BYV6 AC099513.1-201ENST00000490423 301 ntBASIC2.47□□□□□ -2.01
TRIM55Q9BYV6 MRPS17P9-201ENST00000511924 393 ntBASIC2.47□□□□□ -2.01
TRIM55Q9BYV6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM55Q9BYV6 AC064859.1-201ENST00000624741 174 ntBASIC2.47□□□□□ -2.01
TRIM55Q9BYV6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
TRIM55Q9BYV6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TRIM55Q9BYV6 SNORD50B-201ENST00000364995 70 ntBASIC2.46□□□□□ -2.02
TRIM55Q9BYV6 RNU6-360P-201ENST00000390944 104 ntBASIC2.46□□□□□ -2.02
TRIM55Q9BYV6 SNORD72-201ENST00000390994 80 ntBASIC2.46□□□□□ -2.02
TRIM55Q9BYV6 RNU4-43P-201ENST00000410628 137 ntBASIC2.46□□□□□ -2.02
TRIM55Q9BYV6 RNU6-346P-201ENST00000516288 111 ntBASIC2.46□□□□□ -2.02
TRIM55Q9BYV6 RNA5SP24-201ENST00000516478 95 ntBASIC2.46□□□□□ -2.02
TRIM55Q9BYV6 MTND5P41-201ENST00000517498 206 ntBASIC2.46□□□□□ -2.02
TRIM55Q9BYV6 MIR4431-201ENST00000579990 94 ntBASIC2.46□□□□□ -2.02
TRIM55Q9BYV6 Pinc.1-201ENST00000616452 154 ntBASIC2.46□□□□□ -2.02
TRIM55Q9BYV6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.46□□□□□ -2.02
TRIM55Q9BYV6 RNU6-1084P-201ENST00000362498 107 ntBASIC2.45□□□□□ -2.02
TRIM55Q9BYV6 RNA5SP456-201ENST00000364002 114 ntBASIC2.45□□□□□ -2.02
TRIM55Q9BYV6 SNORA6-201ENST00000384033 151 ntBASIC2.45□□□□□ -2.02
TRIM55Q9BYV6 Y_RNA.432-201ENST00000384087 111 ntBASIC2.45□□□□□ -2.02
TRIM55Q9BYV6 Y_RNA.441-201ENST00000384123 112 ntBASIC2.45□□□□□ -2.02
TRIM55Q9BYV6 Y_RNA.464-201ENST00000384282 110 ntBASIC2.45□□□□□ -2.02
TRIM55Q9BYV6 RNU6-424P-201ENST00000384367 105 ntBASIC2.45□□□□□ -2.02
TRIM55Q9BYV6 Y_RNA.506-201ENST00000384494 102 ntBASIC2.45□□□□□ -2.02
TRIM55Q9BYV6 U8.16-201ENST00000391279 133 ntBASIC2.45□□□□□ -2.02
TRIM55Q9BYV6 RNU6-1299P-201ENST00000516316 100 ntBASIC2.45□□□□□ -2.02
TRIM55Q9BYV6 RNU6-1116P-201ENST00000517269 99 ntBASIC2.45□□□□□ -2.02
TRIM55Q9BYV6 AC022254.1-201ENST00000567857 235 ntBASIC2.45□□□□□ -2.02
TRIM55Q9BYV6 MIR4662B-201ENST00000579498 81 ntBASIC2.45□□□□□ -2.02
TRIM55Q9BYV6 AC120024.3-201ENST00000603167 156 ntBASIC2.45□□□□□ -2.02
TRIM55Q9BYV6 MIR6895-201ENST00000613497 78 ntBASIC2.45□□□□□ -2.02
TRIM55Q9BYV6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TRIM55Q9BYV6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
TRIM55Q9BYV6 RNA5SP289-201ENST00000362332 137 ntBASIC2.44□□□□□ -2.02
TRIM55Q9BYV6 Y_RNA.170-201ENST00000363746 110 ntBASIC2.44□□□□□ -2.02
TRIM55Q9BYV6 snoU2-30.1-201ENST00000365012 70 ntBASIC2.44□□□□□ -2.02
TRIM55Q9BYV6 RNU6-643P-201ENST00000384018 107 ntBASIC2.44□□□□□ -2.02
TRIM55Q9BYV6 RNU6-125P-201ENST00000384505 107 ntBASIC2.44□□□□□ -2.02
TRIM55Q9BYV6 SNORA3.2-201ENST00000408221 125 ntBASIC2.44□□□□□ -2.02
TRIM55Q9BYV6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms