Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RNU11-5P-201ENST00000391216 129 ntBASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 Y_RNA.609-201ENST00000410669 89 ntBASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 RNU2-37P-201ENST00000410695 177 ntBASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 AC022018.1-201ENST00000430685 241 ntBASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 Z98742.2-201ENST00000431564 187 ntBASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 AL513328.1-201ENST00000446460 224 ntBASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 AC004223.1-201ENST00000479840 271 ntBASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 RPS26P15-201ENST00000488067 348 ntBASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 CKS1BP2-201ENST00000497342 240 ntBASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 AC103810.7-201ENST00000607821 91 ntBASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 MIR6079-201ENST00000635807 62 ntBASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
COL25A1Q9BXS0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
COL25A1Q9BXS0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL25A1Q9BXS0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.38□□□□□ -1.87
COL25A1Q9BXS0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL25A1Q9BXS0 SNORD115-27-201ENST00000364430 82 ntBASIC3.38□□□□□ -1.87
COL25A1Q9BXS0 RNU6-198P-201ENST00000384258 104 ntBASIC3.38□□□□□ -1.87
COL25A1Q9BXS0 RNU6-524P-201ENST00000384270 107 ntBASIC3.38□□□□□ -1.87
COL25A1Q9BXS0 POLR2J4-204ENST00000418424 324 ntBASIC3.38□□□□□ -1.87
COL25A1Q9BXS0 AL035398.1-201ENST00000430869 322 ntBASIC3.38□□□□□ -1.87
COL25A1Q9BXS0 AC093259.1-201ENST00000509755 300 ntBASIC3.38□□□□□ -1.87
COL25A1Q9BXS0 RNU6-523P-201ENST00000516304 54 ntBASIC3.38□□□□□ -1.87
COL25A1Q9BXS0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.38□□□□□ -1.87
COL25A1Q9BXS0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.38□□□□□ -1.87
COL25A1Q9BXS0 AC110741.2-201ENST00000605278 268 ntBASIC3.38□□□□□ -1.87
COL25A1Q9BXS0 FAS-AS1.1-201ENST00000615327 126 ntBASIC3.38□□□□□ -1.87
COL25A1Q9BXS0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
COL25A1Q9BXS0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 AL138878.1-201ENST00000405131 347 ntBASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 HSPE1P26-201ENST00000405341 275 ntBASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 AP000567.1-201ENST00000406413 156 ntBASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 SNX2P2-201ENST00000424553 323 ntBASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 HMGN2P34-201ENST00000437647 269 ntBASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 RPS29P31-201ENST00000446147 164 ntBASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 AC090255.1-201ENST00000495779 349 ntBASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 RNU6-856P-201ENST00000516959 98 ntBASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 UBL5P2-201ENST00000583788 219 ntBASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 AC021613.1-201ENST00000623880 111 ntBASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COL25A1Q9BXS0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 MIR342-201ENST00000362212 99 ntBASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 RNU6-457P-201ENST00000363999 107 ntBASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 SNORA1.1-201ENST00000364671 133 ntBASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 MIR196B-201ENST00000384852 84 ntBASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 SNORA3.2-201ENST00000408221 125 ntBASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 MIR4762-201ENST00000585261 75 ntBASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 AC012531.5-201ENST00000611375 151 ntBASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 MIR376B-201ENST00000614515 100 ntBASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 AL353997.5-201ENST00000618886 171 ntBASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 MIR1248-201ENST00000629190 106 ntBASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 AL512310.12-203ENST00000640543 90 ntBASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL25A1Q9BXS0 ZNF658B-202ENST00000615961 3375 ntBASIC3.35□□□□□ -1.87
COL25A1Q9BXS0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.35□□□□□ -1.87
COL25A1Q9BXS0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL25A1Q9BXS0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL25A1Q9BXS0 AC060773.1-201ENST00000421698 310 ntBASIC3.35□□□□□ -1.87
COL25A1Q9BXS0 AC090844.1-201ENST00000422019 156 ntBASIC3.35□□□□□ -1.87
COL25A1Q9BXS0 MIR1270-201ENST00000459320 83 ntBASIC3.35□□□□□ -1.87
COL25A1Q9BXS0 AL049830.1-201ENST00000468034 425 ntBASIC3.35□□□□□ -1.87
COL25A1Q9BXS0 AC108729.3-201ENST00000513484 108 ntBASIC3.35□□□□□ -1.87
COL25A1Q9BXS0 SNORA4.4-201ENST00000515921 135 ntBASIC3.35□□□□□ -1.87
COL25A1Q9BXS0 MIR2114-201ENST00000516645 80 ntBASIC3.35□□□□□ -1.87
COL25A1Q9BXS0 AP000867.2-201ENST00000532468 320 ntBASIC3.35□□□□□ -1.87
COL25A1Q9BXS0 AC103810.1-201ENST00000579873 453 ntBASIC3.35□□□□□ -1.87
COL25A1Q9BXS0 MIR6076-201ENST00000617521 113 ntBASIC3.35□□□□□ -1.87
COL25A1Q9BXS0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL25A1Q9BXS0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL25A1Q9BXS0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
COL25A1Q9BXS0 SNORA1B-201ENST00000362535 133 ntBASIC3.34□□□□□ -1.87
COL25A1Q9BXS0 AC069257.2-201ENST00000441819 155 ntBASIC3.34□□□□□ -1.87
COL25A1Q9BXS0 AC093729.1-201ENST00000513074 128 ntBASIC3.34□□□□□ -1.87
COL25A1Q9BXS0 RNU6-86P-201ENST00000606534 107 ntBASIC3.34□□□□□ -1.87
COL25A1Q9BXS0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.34□□□□□ -1.87
COL25A1Q9BXS0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms