Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 U8.7-201ENST00000364940 136 ntBASIC1.26□□□□□ -2.21
CCDC28BQ9BUN5 RNA5SP190-201ENST00000365222 118 ntBASIC1.26□□□□□ -2.21
CCDC28BQ9BUN5 RNU6-144P-201ENST00000383951 107 ntBASIC1.26□□□□□ -2.21
CCDC28BQ9BUN5 RNU6-424P-201ENST00000384367 105 ntBASIC1.26□□□□□ -2.21
CCDC28BQ9BUN5 MT-TW-201ENST00000387382 68 ntBASIC1.26□□□□□ -2.21
CCDC28BQ9BUN5 SNORA26.5-201ENST00000391215 123 ntBASIC1.26□□□□□ -2.21
CCDC28BQ9BUN5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC28BQ9BUN5 MTND3P2-201ENST00000438452 342 ntBASIC1.26□□□□□ -2.21
CCDC28BQ9BUN5 RPS29P29-201ENST00000456396 171 ntBASIC1.26□□□□□ -2.21
CCDC28BQ9BUN5 RNU7-141P-201ENST00000459304 62 ntBASIC1.26□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.641-201ENST00000459414 105 ntBASIC1.26□□□□□ -2.21
CCDC28BQ9BUN5 AC117454.1-201ENST00000491120 168 ntBASIC1.26□□□□□ -2.21
CCDC28BQ9BUN5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC28BQ9BUN5 AL645939.4-201ENST00000604495 135 ntBASIC1.26□□□□□ -2.21
CCDC28BQ9BUN5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.26□□□□□ -2.21
CCDC28BQ9BUN5 AC095038.3-201ENST00000634439 195 ntBASIC1.26□□□□□ -2.21
CCDC28BQ9BUN5 SNORD33-201ENST00000362761 85 ntBASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 RNU6-1272P-201ENST00000362776 107 ntBASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 RNU6-674P-201ENST00000363831 107 ntBASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 RNU4-41P-201ENST00000364426 143 ntBASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.237-201ENST00000364439 102 ntBASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.275-201ENST00000364726 110 ntBASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 RNU6-1080P-201ENST00000383982 107 ntBASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.483-201ENST00000384380 101 ntBASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 RNU6-763P-201ENST00000390865 106 ntBASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 RNU1-78P-201ENST00000391248 165 ntBASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.621-201ENST00000411065 96 ntBASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 Z98949.2-201ENST00000440996 144 ntBASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 RNU1-123P-201ENST00000458950 160 ntBASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 snoU13.26-201ENST00000459452 105 ntBASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 AC015688.6-201ENST00000577737 104 ntBASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 MIR2681-201ENST00000581814 105 ntBASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 MIR4762-201ENST00000585261 75 ntBASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC28BQ9BUN5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 ICE2P2-201ENST00000483823 2787 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.44-201ENST00000362676 108 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.203-201ENST00000364106 102 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.253-201ENST00000364562 112 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.288-201ENST00000364854 92 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.396-201ENST00000383949 103 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 RNU6-939P-201ENST00000384634 107 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 MIR568-201ENST00000385036 95 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 MIR660-201ENST00000385235 97 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 SNORA36B-201ENST00000410438 131 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 RNU2-14P-201ENST00000411053 191 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 CYCSP49-201ENST00000420810 319 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 MRPL35P3-201ENST00000421557 364 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 RNU6-437P-201ENST00000459408 95 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.637-201ENST00000459424 114 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 HMGN1P7-201ENST00000491722 313 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 RPL23AP54-201ENST00000495129 419 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 SCARNA24.2-201ENST00000516968 130 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.714-201ENST00000517065 90 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 AL162730.1-201ENST00000605734 292 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 U2.14-201ENST00000615943 113 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 AC013791.1-201ENST00000616619 62 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 AC027279.3-201ENST00000625055 122 ntBASIC1.24□□□□□ -2.21
CCDC28BQ9BUN5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 MIRLET7C-201ENST00000362160 84 ntBASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 MIR302D-201ENST00000362275 68 ntBASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 RNU6-662P-201ENST00000384253 104 ntBASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 SNORA67.5-201ENST00000391036 107 ntBASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 MTCO2P33-201ENST00000402100 465 ntBASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 AC005908.1-201ENST00000468701 347 ntBASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 RNA5SP168-201ENST00000516642 112 ntBASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 AC090821.2-201ENST00000523552 176 ntBASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 MIR5692C2-201ENST00000577959 77 ntBASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 MIR5688-201ENST00000580619 83 ntBASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 AC104984.5-201ENST00000586878 94 ntBASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 AP001485.1-201ENST00000604799 199 ntBASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 AL591926.4-201ENST00000616895 298 ntBASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 SNORD3E-202ENST00000627253 216 ntBASIC1.23□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.82-201ENST00000363000 102 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.92-201ENST00000363043 102 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 RNU6-1205P-201ENST00000363625 106 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 RNU6-1048P-201ENST00000364054 107 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.235-201ENST00000364412 102 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.306-201ENST00000365015 102 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.312-201ENST00000365089 102 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.322-201ENST00000365151 102 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.352-201ENST00000365439 102 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 RNU6-969P-201ENST00000383900 105 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 MIR513A1-201ENST00000385138 129 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 U8.16-201ENST00000391279 133 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 BTF3P11-201ENST00000426582 477 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 CALM2P4-201ENST00000430810 426 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 AC245517.4-201ENST00000448601 281 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.650-201ENST00000459002 102 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 CYCTP-201ENST00000504253 315 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.777-201ENST00000516982 102 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 AC087685.1-201ENST00000587507 141 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 AC005357.1-201ENST00000588399 301 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 266.1 ms