Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 Y_RNA.621-201ENST00000411065 96 ntBASIC1.78□□□□□ -2.12
HERPUD2Q9BSE4 RNU2-61P-201ENST00000411069 191 ntBASIC1.78□□□□□ -2.12
HERPUD2Q9BSE4 RNU4-61P-201ENST00000411243 107 ntBASIC1.78□□□□□ -2.12
HERPUD2Q9BSE4 AL162725.1-201ENST00000435405 301 ntBASIC1.78□□□□□ -2.12
HERPUD2Q9BSE4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.78□□□□□ -2.12
HERPUD2Q9BSE4 TRBVB-201ENST00000477100 408 ntBASIC1.78□□□□□ -2.12
HERPUD2Q9BSE4 RNU7-110P-201ENST00000516891 62 ntBASIC1.78□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-255P-201ENST00000516957 105 ntBASIC1.78□□□□□ -2.12
HERPUD2Q9BSE4 AL358944.1-201ENST00000528537 144 ntBASIC1.78□□□□□ -2.12
HERPUD2Q9BSE4 AC011921.3-201ENST00000605540 361 ntBASIC1.78□□□□□ -2.12
HERPUD2Q9BSE4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.78□□□□□ -2.12
HERPUD2Q9BSE4 MIR335-201ENST00000362173 94 ntBASIC1.77□□□□□ -2.13
HERPUD2Q9BSE4 Y_RNA.76-201ENST00000362931 109 ntBASIC1.77□□□□□ -2.13
HERPUD2Q9BSE4 Y_RNA.150-201ENST00000363562 102 ntBASIC1.77□□□□□ -2.13
HERPUD2Q9BSE4 Y_RNA.152-201ENST00000363578 100 ntBASIC1.77□□□□□ -2.13
HERPUD2Q9BSE4 Y_RNA.180-201ENST00000363867 113 ntBASIC1.77□□□□□ -2.13
HERPUD2Q9BSE4 Y_RNA.269-201ENST00000364685 89 ntBASIC1.77□□□□□ -2.13
HERPUD2Q9BSE4 AL603910.2-201ENST00000407268 136 ntBASIC1.77□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-710P-201ENST00000410424 105 ntBASIC1.77□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-651P-201ENST00000411040 105 ntBASIC1.77□□□□□ -2.13
HERPUD2Q9BSE4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.77□□□□□ -2.13
HERPUD2Q9BSE4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.77□□□□□ -2.13
HERPUD2Q9BSE4 MIR4300-201ENST00000581016 96 ntBASIC1.77□□□□□ -2.13
HERPUD2Q9BSE4 AC098479.1-201ENST00000609225 154 ntBASIC1.77□□□□□ -2.13
HERPUD2Q9BSE4 MIR8081-201ENST00000611533 95 ntBASIC1.77□□□□□ -2.13
HERPUD2Q9BSE4 AC084768.2-201ENST00000622736 221 ntBASIC1.77□□□□□ -2.13
HERPUD2Q9BSE4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.77□□□□□ -2.13
HERPUD2Q9BSE4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.76□□□□□ -2.13
HERPUD2Q9BSE4 RNA5SP432-201ENST00000362480 116 ntBASIC1.76□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-774P-201ENST00000363238 107 ntBASIC1.76□□□□□ -2.13
HERPUD2Q9BSE4 Y_RNA.277-201ENST00000364754 102 ntBASIC1.76□□□□□ -2.13
HERPUD2Q9BSE4 Y_RNA.329-201ENST00000365209 107 ntBASIC1.76□□□□□ -2.13
HERPUD2Q9BSE4 Y_RNA.555-201ENST00000384673 110 ntBASIC1.76□□□□□ -2.13
HERPUD2Q9BSE4 MIR660-201ENST00000385235 97 ntBASIC1.76□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-493P-201ENST00000391321 108 ntBASIC1.76□□□□□ -2.13
HERPUD2Q9BSE4 RPL30P13-201ENST00000418873 348 ntBASIC1.76□□□□□ -2.13
HERPUD2Q9BSE4 AC024067.1-201ENST00000426199 223 ntBASIC1.76□□□□□ -2.13
HERPUD2Q9BSE4 AL135790.2-201ENST00000437701 267 ntBASIC1.76□□□□□ -2.13
HERPUD2Q9BSE4 RNA5SP168-201ENST00000516642 112 ntBASIC1.76□□□□□ -2.13
HERPUD2Q9BSE4 DEFB108E-201ENST00000524692 240 ntBASIC1.76□□□□□ -2.13
HERPUD2Q9BSE4 AC015720.1-201ENST00000565251 277 ntBASIC1.76□□□□□ -2.13
HERPUD2Q9BSE4 AC004792.1-201ENST00000614523 137 ntBASIC1.76□□□□□ -2.13
HERPUD2Q9BSE4 AL353997.5-201ENST00000618886 171 ntBASIC1.76□□□□□ -2.13
HERPUD2Q9BSE4 Y_RNA.143-201ENST00000363520 106 ntBASIC1.75□□□□□ -2.13
HERPUD2Q9BSE4 SNORD27-201ENST00000363981 72 ntBASIC1.75□□□□□ -2.13
HERPUD2Q9BSE4 Y_RNA.286-201ENST00000364813 102 ntBASIC1.75□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-187P-201ENST00000384139 106 ntBASIC1.75□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-886P-201ENST00000384319 105 ntBASIC1.75□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-21P-201ENST00000384710 107 ntBASIC1.75□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-713P-201ENST00000384761 107 ntBASIC1.75□□□□□ -2.13
HERPUD2Q9BSE4 SNORA12.1-201ENST00000390873 148 ntBASIC1.75□□□□□ -2.13
HERPUD2Q9BSE4 CYCSP49-201ENST00000420810 319 ntBASIC1.75□□□□□ -2.13
HERPUD2Q9BSE4 RPS27P16-201ENST00000425758 201 ntBASIC1.75□□□□□ -2.13
HERPUD2Q9BSE4 MTND5P15-201ENST00000434246 349 ntBASIC1.75□□□□□ -2.13
HERPUD2Q9BSE4 HSPE1P25-201ENST00000455484 251 ntBASIC1.75□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-496P-201ENST00000516145 99 ntBASIC1.75□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-1338P-201ENST00000516328 91 ntBASIC1.75□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-966P-201ENST00000516479 104 ntBASIC1.75□□□□□ -2.13
HERPUD2Q9BSE4 MIR3618-201ENST00000580330 88 ntBASIC1.75□□□□□ -2.13
HERPUD2Q9BSE4 MIR4423-201ENST00000580922 80 ntBASIC1.75□□□□□ -2.13
HERPUD2Q9BSE4 Y_RNA.117-201ENST00000363294 101 ntBASIC1.74□□□□□ -2.13
HERPUD2Q9BSE4 Y_RNA.478-201ENST00000384358 107 ntBASIC1.74□□□□□ -2.13
HERPUD2Q9BSE4 SNORD116-13-201ENST00000384408 92 ntBASIC1.74□□□□□ -2.13
HERPUD2Q9BSE4 Y_RNA.581-201ENST00000391017 97 ntBASIC1.74□□□□□ -2.13
HERPUD2Q9BSE4 PIGPP3-201ENST00000425307 415 ntBASIC1.74□□□□□ -2.13
HERPUD2Q9BSE4 CALM2P4-201ENST00000430810 426 ntBASIC1.74□□□□□ -2.13
HERPUD2Q9BSE4 OR9P1P-201ENST00000496431 281 ntBASIC1.74□□□□□ -2.13
HERPUD2Q9BSE4 AC074198.2-201ENST00000508153 258 ntBASIC1.74□□□□□ -2.13
HERPUD2Q9BSE4 RNU7-12P-201ENST00000516030 62 ntBASIC1.74□□□□□ -2.13
HERPUD2Q9BSE4 SNORA81.3-201ENST00000517283 198 ntBASIC1.74□□□□□ -2.13
HERPUD2Q9BSE4 MIR3122-201ENST00000577243 73 ntBASIC1.74□□□□□ -2.13
HERPUD2Q9BSE4 MIR4778-201ENST00000577635 80 ntBASIC1.74□□□□□ -2.13
HERPUD2Q9BSE4 MIR3683-201ENST00000580847 82 ntBASIC1.74□□□□□ -2.13
HERPUD2Q9BSE4 AL078604.3-201ENST00000615580 211 ntBASIC1.74□□□□□ -2.13
HERPUD2Q9BSE4 AL391987.6-201ENST00000305671 199 ntBASIC1.73□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-682P-201ENST00000363843 106 ntBASIC1.73□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-937P-201ENST00000384325 106 ntBASIC1.73□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-424P-201ENST00000384367 105 ntBASIC1.73□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-855P-201ENST00000410395 104 ntBASIC1.73□□□□□ -2.13
HERPUD2Q9BSE4 RPS4XP11-201ENST00000446897 772 ntBASIC1.73□□□□□ -2.13
HERPUD2Q9BSE4 RNU1-98P-201ENST00000458992 160 ntBASIC1.73□□□□□ -2.13
HERPUD2Q9BSE4 SNORA25.15-201ENST00000516487 89 ntBASIC1.73□□□□□ -2.13
HERPUD2Q9BSE4 SNORA40.15-201ENST00000516884 107 ntBASIC1.73□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-250P-201ENST00000516958 103 ntBASIC1.73□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-1212P-201ENST00000517023 104 ntBASIC1.73□□□□□ -2.13
HERPUD2Q9BSE4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.73□□□□□ -2.13
HERPUD2Q9BSE4 MIR4255-201ENST00000579351 72 ntBASIC1.73□□□□□ -2.13
HERPUD2Q9BSE4 AC106754.2-201ENST00000623006 233 ntBASIC1.73□□□□□ -2.13
HERPUD2Q9BSE4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.73□□□□□ -2.13
HERPUD2Q9BSE4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
HERPUD2Q9BSE4 Y_RNA.65-201ENST00000362846 100 ntBASIC1.72□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-47P-201ENST00000383866 107 ntBASIC1.72□□□□□ -2.13
HERPUD2Q9BSE4 SNORD63-201ENST00000384262 68 ntBASIC1.72□□□□□ -2.13
HERPUD2Q9BSE4 RNU6-125P-201ENST00000384505 107 ntBASIC1.72□□□□□ -2.13
HERPUD2Q9BSE4 U8.16-201ENST00000391279 133 ntBASIC1.72□□□□□ -2.13
HERPUD2Q9BSE4 MTCO2P33-201ENST00000402100 465 ntBASIC1.72□□□□□ -2.13
HERPUD2Q9BSE4 AL392103.1-201ENST00000447000 198 ntBASIC1.72□□□□□ -2.13
HERPUD2Q9BSE4 AC005972.2-201ENST00000604690 348 ntBASIC1.72□□□□□ -2.13
HERPUD2Q9BSE4 AC068700.1-201ENST00000565862 3754 ntBASIC1.71□□□□□ -2.14
HERPUD2Q9BSE4 RNU6-199P-201ENST00000362954 107 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 227.5 ms