Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 RNU6-1149P-201ENST00000516810 97 ntBASIC3.09□□□□□ -1.91
ZKSCAN3Q9BRR0 AC091544.4-201ENST00000555268 342 ntBASIC3.09□□□□□ -1.91
ZKSCAN3Q9BRR0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
ZKSCAN3Q9BRR0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 Y_RNA.43-201ENST00000362670 111 ntBASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 SNORA33-201ENST00000363664 130 ntBASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 MIR548A2-201ENST00000384956 97 ntBASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 MIR548A1-201ENST00000385041 97 ntBASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 RNA5SP210-201ENST00000391034 120 ntBASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 SNORD77.3-201ENST00000391113 65 ntBASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 AC009238.1-201ENST00000442165 424 ntBASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 AC009237.6-201ENST00000446969 424 ntBASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 U4atac.1-201ENST00000618345 95 ntBASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 RNU6-1072P-201ENST00000384703 107 ntBASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 RNU6-443P-201ENST00000384780 107 ntBASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 AC007064.1-201ENST00000412238 351 ntBASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 SNORA59A-201ENST00000459326 152 ntBASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 RNA5SP170-201ENST00000517150 101 ntBASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 IGKV1-22-201ENST00000524313 326 ntBASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 MIR4672-201ENST00000583126 81 ntBASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 AL449363.1-201ENST00000617815 186 ntBASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 Y_RNA.309-201ENST00000365046 111 ntBASIC3.06□□□□□ -1.92
ZKSCAN3Q9BRR0 MIR518F-201ENST00000384973 87 ntBASIC3.06□□□□□ -1.92
ZKSCAN3Q9BRR0 MIR1263-201ENST00000408324 86 ntBASIC3.06□□□□□ -1.92
ZKSCAN3Q9BRR0 RNA5SP136-201ENST00000410906 107 ntBASIC3.06□□□□□ -1.92
ZKSCAN3Q9BRR0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.06□□□□□ -1.92
ZKSCAN3Q9BRR0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
ZKSCAN3Q9BRR0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
ZKSCAN3Q9BRR0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 MIR1262-201ENST00000408276 93 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 SNORD88.1-201ENST00000408684 91 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 RN7SKP284-201ENST00000411002 343 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 RN7SL297P-201ENST00000483161 293 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 AL163195.1-201ENST00000496941 348 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 SCARNA15-202ENST00000516881 127 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 MIR5197-201ENST00000583721 112 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 MIR4762-201ENST00000585261 75 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 RPL12P50-201ENST00000603116 116 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 AC008555.8-201ENST00000623602 2168 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 U8.5-201ENST00000364528 136 ntBASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 RNU6-442P-201ENST00000383968 104 ntBASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 Y_RNA.528-201ENST00000384575 108 ntBASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 MIR548O-201ENST00000408583 114 ntBASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 UBE2DNL-203ENST00000474922 222 ntBASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 SNORD68-201ENST00000363214 84 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 RNA5SP68-201ENST00000363885 119 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 SNORD14E-201ENST00000364009 85 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 Y_RNA.410-201ENST00000383992 113 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 RNU6-168P-201ENST00000516189 101 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 RNU6-412P-201ENST00000516434 106 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 RNA5SP148-201ENST00000516527 94 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 SNORA31.26-201ENST00000517250 137 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 AC006441.5-201ENST00000612680 209 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 AC134878.1-201ENST00000619901 243 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 CTSLP2-204ENST00000629029 392 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 RNU6-862P-201ENST00000362804 105 ntBASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 TRBV12-1-201ENST00000479785 344 ntBASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 RNA5SP282-201ENST00000516355 108 ntBASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 MIR3162-201ENST00000581818 82 ntBASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 MIR6817-201ENST00000615588 66 ntBASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 AL137067.1-201ENST00000615933 120 ntBASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 RNA5SP493-201ENST00000364115 91 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 snoU2-30.1-201ENST00000365012 70 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 U8.9-201ENST00000365667 134 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 MIR570-201ENST00000384917 97 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 RNA5SP89-201ENST00000410300 108 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 RNA5SP344-201ENST00000411081 104 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 CALM2P4-201ENST00000430810 426 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 AL445687.1-201ENST00000439946 251 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 AL031737.1-201ENST00000450125 223 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 COX6CP6-201ENST00000490840 228 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 203.9 ms