Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 RNU6-1149P-201ENST00000516810 97 ntBASIC3.09□□□□□ -1.91
ZKSCAN3Q9BRR0 AC091544.4-201ENST00000555268 342 ntBASIC3.09□□□□□ -1.91
ZKSCAN3Q9BRR0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
ZKSCAN3Q9BRR0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 Y_RNA.43-201ENST00000362670 111 ntBASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 SNORA33-201ENST00000363664 130 ntBASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 MIR548A2-201ENST00000384956 97 ntBASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 MIR548A1-201ENST00000385041 97 ntBASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 RNA5SP210-201ENST00000391034 120 ntBASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 SNORD77.3-201ENST00000391113 65 ntBASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 AC009238.1-201ENST00000442165 424 ntBASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 AC009237.6-201ENST00000446969 424 ntBASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 U4atac.1-201ENST00000618345 95 ntBASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZKSCAN3Q9BRR0 RNU6-1072P-201ENST00000384703 107 ntBASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 RNU6-443P-201ENST00000384780 107 ntBASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 AC007064.1-201ENST00000412238 351 ntBASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 SNORA59A-201ENST00000459326 152 ntBASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 RNA5SP170-201ENST00000517150 101 ntBASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 IGKV1-22-201ENST00000524313 326 ntBASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 MIR4672-201ENST00000583126 81 ntBASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 AL449363.1-201ENST00000617815 186 ntBASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ZKSCAN3Q9BRR0 Y_RNA.309-201ENST00000365046 111 ntBASIC3.06□□□□□ -1.92
ZKSCAN3Q9BRR0 MIR518F-201ENST00000384973 87 ntBASIC3.06□□□□□ -1.92
ZKSCAN3Q9BRR0 MIR1263-201ENST00000408324 86 ntBASIC3.06□□□□□ -1.92
ZKSCAN3Q9BRR0 RNA5SP136-201ENST00000410906 107 ntBASIC3.06□□□□□ -1.92
ZKSCAN3Q9BRR0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.06□□□□□ -1.92
ZKSCAN3Q9BRR0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
ZKSCAN3Q9BRR0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
ZKSCAN3Q9BRR0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 MIR1262-201ENST00000408276 93 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 SNORD88.1-201ENST00000408684 91 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 RN7SKP284-201ENST00000411002 343 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 RN7SL297P-201ENST00000483161 293 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 AL163195.1-201ENST00000496941 348 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 SCARNA15-202ENST00000516881 127 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 MIR5197-201ENST00000583721 112 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 MIR4762-201ENST00000585261 75 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 RPL12P50-201ENST00000603116 116 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 AC008555.8-201ENST00000623602 2168 ntBASIC3.05□□□□□ -1.92
ZKSCAN3Q9BRR0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 U8.5-201ENST00000364528 136 ntBASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 RNU6-442P-201ENST00000383968 104 ntBASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 Y_RNA.528-201ENST00000384575 108 ntBASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 MIR548O-201ENST00000408583 114 ntBASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 UBE2DNL-203ENST00000474922 222 ntBASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ZKSCAN3Q9BRR0 SNORD68-201ENST00000363214 84 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 RNA5SP68-201ENST00000363885 119 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 SNORD14E-201ENST00000364009 85 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 Y_RNA.410-201ENST00000383992 113 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 RNU6-168P-201ENST00000516189 101 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 RNU6-412P-201ENST00000516434 106 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 RNA5SP148-201ENST00000516527 94 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 SNORA31.26-201ENST00000517250 137 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 AC006441.5-201ENST00000612680 209 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 AC134878.1-201ENST00000619901 243 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 CTSLP2-204ENST00000629029 392 ntBASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
ZKSCAN3Q9BRR0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 RNU6-862P-201ENST00000362804 105 ntBASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 TRBV12-1-201ENST00000479785 344 ntBASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 RNA5SP282-201ENST00000516355 108 ntBASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 MIR3162-201ENST00000581818 82 ntBASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 MIR6817-201ENST00000615588 66 ntBASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 AL137067.1-201ENST00000615933 120 ntBASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
ZKSCAN3Q9BRR0 RNA5SP493-201ENST00000364115 91 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 snoU2-30.1-201ENST00000365012 70 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 U8.9-201ENST00000365667 134 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 MIR570-201ENST00000384917 97 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 RNA5SP89-201ENST00000410300 108 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 RNA5SP344-201ENST00000411081 104 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 CALM2P4-201ENST00000430810 426 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 AL445687.1-201ENST00000439946 251 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 AL031737.1-201ENST00000450125 223 ntBASIC3.01□□□□□ -1.93
ZKSCAN3Q9BRR0 COX6CP6-201ENST00000490840 228 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms