Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 DNAJC19P9-201ENST00000555084 351 ntBASIC1.75□□□□□ -2.13
CLSTN3Q9BQT9 AL512598.1-201ENST00000610158 273 ntBASIC1.75□□□□□ -2.13
CLSTN3Q9BQT9 U4.1-201ENST00000620349 87 ntBASIC1.75□□□□□ -2.13
CLSTN3Q9BQT9 7SK.10-201ENST00000621414 298 ntBASIC1.75□□□□□ -2.13
CLSTN3Q9BQT9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.75□□□□□ -2.13
CLSTN3Q9BQT9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.75□□□□□ -2.13
CLSTN3Q9BQT9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CLSTN3Q9BQT9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
CLSTN3Q9BQT9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CLSTN3Q9BQT9 RNU6-1123P-201ENST00000362347 106 ntBASIC1.74□□□□□ -2.13
CLSTN3Q9BQT9 SNORA1B-201ENST00000362535 133 ntBASIC1.74□□□□□ -2.13
CLSTN3Q9BQT9 Y_RNA.172-201ENST00000363765 102 ntBASIC1.74□□□□□ -2.13
CLSTN3Q9BQT9 RNU6-899P-201ENST00000363947 107 ntBASIC1.74□□□□□ -2.13
CLSTN3Q9BQT9 Y_RNA.237-201ENST00000364439 102 ntBASIC1.74□□□□□ -2.13
CLSTN3Q9BQT9 Y_RNA.288-201ENST00000364854 92 ntBASIC1.74□□□□□ -2.13
CLSTN3Q9BQT9 SNORA4.2-201ENST00000365313 147 ntBASIC1.74□□□□□ -2.13
CLSTN3Q9BQT9 SNORA72.4-201ENST00000384174 132 ntBASIC1.74□□□□□ -2.13
CLSTN3Q9BQT9 AC091959.1-201ENST00000495857 238 ntBASIC1.74□□□□□ -2.13
CLSTN3Q9BQT9 RNU7-115P-201ENST00000516433 55 ntBASIC1.74□□□□□ -2.13
CLSTN3Q9BQT9 SCARNA24.2-201ENST00000516968 130 ntBASIC1.74□□□□□ -2.13
CLSTN3Q9BQT9 MIR3618-201ENST00000580330 88 ntBASIC1.74□□□□□ -2.13
CLSTN3Q9BQT9 AC073349.3-201ENST00000617616 186 ntBASIC1.74□□□□□ -2.13
CLSTN3Q9BQT9 MIR548AY-201ENST00000617669 107 ntBASIC1.74□□□□□ -2.13
CLSTN3Q9BQT9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CLSTN3Q9BQT9 UBE2WP1-201ENST00000362030 340 ntBASIC1.73□□□□□ -2.13
CLSTN3Q9BQT9 RNU6-144P-201ENST00000383951 107 ntBASIC1.73□□□□□ -2.13
CLSTN3Q9BQT9 Y_RNA.518-201ENST00000384552 113 ntBASIC1.73□□□□□ -2.13
CLSTN3Q9BQT9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.73□□□□□ -2.13
CLSTN3Q9BQT9 STAG3L5P-204ENST00000443759 179 ntBASIC1.73□□□□□ -2.13
CLSTN3Q9BQT9 snoU13.9-201ENST00000458927 103 ntBASIC1.73□□□□□ -2.13
CLSTN3Q9BQT9 RNU7-95P-201ENST00000459222 64 ntBASIC1.73□□□□□ -2.13
CLSTN3Q9BQT9 MIR2681-201ENST00000581814 105 ntBASIC1.73□□□□□ -2.13
CLSTN3Q9BQT9 MIR3149-201ENST00000584629 83 ntBASIC1.73□□□□□ -2.13
CLSTN3Q9BQT9 AL645939.4-201ENST00000604495 135 ntBASIC1.73□□□□□ -2.13
CLSTN3Q9BQT9 AL513423.1-201ENST00000621695 132 ntBASIC1.73□□□□□ -2.13
CLSTN3Q9BQT9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.73□□□□□ -2.13
CLSTN3Q9BQT9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.73□□□□□ -2.13
CLSTN3Q9BQT9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
CLSTN3Q9BQT9 Y_RNA.193-201ENST00000363979 102 ntBASIC1.72□□□□□ -2.13
CLSTN3Q9BQT9 RNU6-801P-201ENST00000364087 105 ntBASIC1.72□□□□□ -2.13
CLSTN3Q9BQT9 SNORD48-201ENST00000364953 64 ntBASIC1.72□□□□□ -2.13
CLSTN3Q9BQT9 Y_RNA.452-201ENST00000384202 108 ntBASIC1.72□□□□□ -2.13
CLSTN3Q9BQT9 RPL31P63-201ENST00000422565 375 ntBASIC1.72□□□□□ -2.13
CLSTN3Q9BQT9 AL135790.2-201ENST00000437701 267 ntBASIC1.72□□□□□ -2.13
CLSTN3Q9BQT9 AC104332.1-201ENST00000440471 797 ntBASIC1.72□□□□□ -2.13
CLSTN3Q9BQT9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.72□□□□□ -2.13
CLSTN3Q9BQT9 SNORD127-201ENST00000458892 86 ntBASIC1.72□□□□□ -2.13
CLSTN3Q9BQT9 snoU13.18-201ENST00000459483 104 ntBASIC1.72□□□□□ -2.13
CLSTN3Q9BQT9 RPL23AP54-201ENST00000495129 419 ntBASIC1.72□□□□□ -2.13
CLSTN3Q9BQT9 AC008834.1-201ENST00000511612 175 ntBASIC1.72□□□□□ -2.13
CLSTN3Q9BQT9 Y_RNA.668-201ENST00000516233 93 ntBASIC1.72□□□□□ -2.13
CLSTN3Q9BQT9 AC024405.2-202ENST00000532731 184 ntBASIC1.72□□□□□ -2.13
CLSTN3Q9BQT9 AC127455.1-201ENST00000565496 145 ntBASIC1.72□□□□□ -2.13
CLSTN3Q9BQT9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.72□□□□□ -2.13
CLSTN3Q9BQT9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CLSTN3Q9BQT9 Y_RNA.44-201ENST00000362676 108 ntBASIC1.71□□□□□ -2.14
CLSTN3Q9BQT9 SNORD33-201ENST00000362761 85 ntBASIC1.71□□□□□ -2.14
CLSTN3Q9BQT9 U8.7-201ENST00000364940 136 ntBASIC1.71□□□□□ -2.14
CLSTN3Q9BQT9 Y_RNA.466-201ENST00000384294 113 ntBASIC1.71□□□□□ -2.14
CLSTN3Q9BQT9 RNU2-38P-201ENST00000410856 79 ntBASIC1.71□□□□□ -2.14
CLSTN3Q9BQT9 AC117454.1-201ENST00000491120 168 ntBASIC1.71□□□□□ -2.14
CLSTN3Q9BQT9 RNU6-1007P-201ENST00000516586 107 ntBASIC1.71□□□□□ -2.14
CLSTN3Q9BQT9 AC021506.2-201ENST00000612354 169 ntBASIC1.71□□□□□ -2.14
CLSTN3Q9BQT9 MIR424-201ENST00000362227 98 ntBASIC1.7□□□□□ -2.14
CLSTN3Q9BQT9 RNU6-1272P-201ENST00000362776 107 ntBASIC1.7□□□□□ -2.14
CLSTN3Q9BQT9 RNU1-42P-201ENST00000364033 160 ntBASIC1.7□□□□□ -2.14
CLSTN3Q9BQT9 RNU6-60P-201ENST00000364792 103 ntBASIC1.7□□□□□ -2.14
CLSTN3Q9BQT9 RNU6-702P-201ENST00000364982 107 ntBASIC1.7□□□□□ -2.14
CLSTN3Q9BQT9 RNU6-439P-201ENST00000384188 106 ntBASIC1.7□□□□□ -2.14
CLSTN3Q9BQT9 AC004965.1-201ENST00000413033 213 ntBASIC1.7□□□□□ -2.14
CLSTN3Q9BQT9 RNU7-141P-201ENST00000459304 62 ntBASIC1.7□□□□□ -2.14
CLSTN3Q9BQT9 AC012433.1-201ENST00000588916 398 ntBASIC1.7□□□□□ -2.14
CLSTN3Q9BQT9 RNU6-1205P-201ENST00000363625 106 ntBASIC1.69□□□□□ -2.14
CLSTN3Q9BQT9 RNU6-674P-201ENST00000363831 107 ntBASIC1.69□□□□□ -2.14
CLSTN3Q9BQT9 MIR548H3-201ENST00000408771 118 ntBASIC1.69□□□□□ -2.14
CLSTN3Q9BQT9 SNORA36B-201ENST00000410438 131 ntBASIC1.69□□□□□ -2.14
CLSTN3Q9BQT9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.69□□□□□ -2.14
CLSTN3Q9BQT9 RNU6-1132P-201ENST00000459214 107 ntBASIC1.69□□□□□ -2.14
CLSTN3Q9BQT9 HMGN1P7-201ENST00000491722 313 ntBASIC1.69□□□□□ -2.14
CLSTN3Q9BQT9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.69□□□□□ -2.14
CLSTN3Q9BQT9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.69□□□□□ -2.14
CLSTN3Q9BQT9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.69□□□□□ -2.14
CLSTN3Q9BQT9 SNORD53B-201ENST00000577887 78 ntBASIC1.69□□□□□ -2.14
CLSTN3Q9BQT9 BX248123.2-201ENST00000606318 124 ntBASIC1.69□□□□□ -2.14
CLSTN3Q9BQT9 AC062037.2-201ENST00000610137 73 ntBASIC1.69□□□□□ -2.14
CLSTN3Q9BQT9 U2.14-201ENST00000615943 113 ntBASIC1.69□□□□□ -2.14
CLSTN3Q9BQT9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
CLSTN3Q9BQT9 Y_RNA.14-201ENST00000362415 103 ntBASIC1.68□□□□□ -2.14
CLSTN3Q9BQT9 Y_RNA.203-201ENST00000364106 102 ntBASIC1.68□□□□□ -2.14
CLSTN3Q9BQT9 Y_RNA.217-201ENST00000364214 105 ntBASIC1.68□□□□□ -2.14
CLSTN3Q9BQT9 Y_RNA.242-201ENST00000364473 110 ntBASIC1.68□□□□□ -2.14
CLSTN3Q9BQT9 Y_RNA.275-201ENST00000364726 110 ntBASIC1.68□□□□□ -2.14
CLSTN3Q9BQT9 Y_RNA.352-201ENST00000365439 102 ntBASIC1.68□□□□□ -2.14
CLSTN3Q9BQT9 RNU6-1080P-201ENST00000383982 107 ntBASIC1.68□□□□□ -2.14
CLSTN3Q9BQT9 RNU6-662P-201ENST00000384253 104 ntBASIC1.68□□□□□ -2.14
CLSTN3Q9BQT9 MIR194-1-201ENST00000384892 85 ntBASIC1.68□□□□□ -2.14
CLSTN3Q9BQT9 RNU6-763P-201ENST00000390865 106 ntBASIC1.68□□□□□ -2.14
CLSTN3Q9BQT9 MIR934-201ENST00000401241 83 ntBASIC1.68□□□□□ -2.14
CLSTN3Q9BQT9 MTCO2P33-201ENST00000402100 465 ntBASIC1.68□□□□□ -2.14
CLSTN3Q9BQT9 RN7SKP101-201ENST00000411376 320 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms