Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RNU6-360P-201ENST00000390944 104 ntBASIC2.1□□□□□ -2.07
VRK1Q99986 PCNPP3-201ENST00000393579 471 ntBASIC2.1□□□□□ -2.07
VRK1Q99986 AL034345.1-201ENST00000407768 123 ntBASIC2.1□□□□□ -2.07
VRK1Q99986 RNA5SP24-201ENST00000516478 95 ntBASIC2.1□□□□□ -2.07
VRK1Q99986 SCARNA16.3-201ENST00000516595 184 ntBASIC2.1□□□□□ -2.07
VRK1Q99986 SNORA31.17-201ENST00000516953 127 ntBASIC2.1□□□□□ -2.07
VRK1Q99986 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.1□□□□□ -2.07
VRK1Q99986 AL773524.1-201ENST00000614065 229 ntBASIC2.1□□□□□ -2.07
VRK1Q99986 AC064859.1-201ENST00000624741 174 ntBASIC2.1□□□□□ -2.07
VRK1Q99986 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.1□□□□□ -2.07
VRK1Q99986 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VRK1Q99986 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
VRK1Q99986 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
VRK1Q99986 RNA5SP289-201ENST00000362332 137 ntBASIC2.09□□□□□ -2.07
VRK1Q99986 Y_RNA.150-201ENST00000363562 102 ntBASIC2.09□□□□□ -2.07
VRK1Q99986 RNA5SP456-201ENST00000364002 114 ntBASIC2.09□□□□□ -2.07
VRK1Q99986 Y_RNA.412-201ENST00000384001 104 ntBASIC2.09□□□□□ -2.07
VRK1Q99986 RNU6-1031P-201ENST00000384773 107 ntBASIC2.09□□□□□ -2.07
VRK1Q99986 Y_RNA.587-201ENST00000391210 103 ntBASIC2.09□□□□□ -2.07
VRK1Q99986 AL359511.1-201ENST00000402970 211 ntBASIC2.09□□□□□ -2.07
VRK1Q99986 HMGN2P38-201ENST00000423806 265 ntBASIC2.09□□□□□ -2.07
VRK1Q99986 HSPE1P9-201ENST00000440046 311 ntBASIC2.09□□□□□ -2.07
VRK1Q99986 snoU13.27-201ENST00000459278 104 ntBASIC2.09□□□□□ -2.07
VRK1Q99986 NDUFA4P2-201ENST00000489989 244 ntBASIC2.09□□□□□ -2.07
VRK1Q99986 AC109810.1-201ENST00000534066 224 ntBASIC2.09□□□□□ -2.07
VRK1Q99986 AL049861.1-201ENST00000603130 150 ntBASIC2.09□□□□□ -2.07
VRK1Q99986 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
VRK1Q99986 RNA5SP276-201ENST00000362580 94 ntBASIC2.08□□□□□ -2.08
VRK1Q99986 U8.2-201ENST00000363156 134 ntBASIC2.08□□□□□ -2.08
VRK1Q99986 Y_RNA.242-201ENST00000364473 110 ntBASIC2.08□□□□□ -2.08
VRK1Q99986 RNU6-1138P-201ENST00000365359 106 ntBASIC2.08□□□□□ -2.08
VRK1Q99986 RNU6-728P-201ENST00000365375 104 ntBASIC2.08□□□□□ -2.08
VRK1Q99986 RNU6-209P-201ENST00000384118 107 ntBASIC2.08□□□□□ -2.08
VRK1Q99986 RNU6-131P-201ENST00000391144 107 ntBASIC2.08□□□□□ -2.08
VRK1Q99986 RNU4-43P-201ENST00000410628 137 ntBASIC2.08□□□□□ -2.08
VRK1Q99986 RNU4-53P-201ENST00000410828 140 ntBASIC2.08□□□□□ -2.08
VRK1Q99986 RPL30P13-201ENST00000418873 348 ntBASIC2.08□□□□□ -2.08
VRK1Q99986 STAG3L5P-204ENST00000443759 179 ntBASIC2.08□□□□□ -2.08
VRK1Q99986 AC090255.1-201ENST00000495779 349 ntBASIC2.08□□□□□ -2.08
VRK1Q99986 AC005840.1-201ENST00000498412 377 ntBASIC2.08□□□□□ -2.08
VRK1Q99986 AC234781.5-201ENST00000508429 271 ntBASIC2.08□□□□□ -2.08
VRK1Q99986 SNORD77.4-201ENST00000516158 81 ntBASIC2.08□□□□□ -2.08
VRK1Q99986 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.08□□□□□ -2.08
VRK1Q99986 RNU6-126P-201ENST00000516685 103 ntBASIC2.08□□□□□ -2.08
VRK1Q99986 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.08□□□□□ -2.08
VRK1Q99986 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.08□□□□□ -2.08
VRK1Q99986 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
VRK1Q99986 SNORD68-201ENST00000363214 84 ntBASIC2.07□□□□□ -2.08
VRK1Q99986 RNU4-52P-201ENST00000384209 138 ntBASIC2.07□□□□□ -2.08
VRK1Q99986 SNORA70B-201ENST00000384210 135 ntBASIC2.07□□□□□ -2.08
VRK1Q99986 SNORA12.1-201ENST00000390873 148 ntBASIC2.07□□□□□ -2.08
VRK1Q99986 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.07□□□□□ -2.08
VRK1Q99986 RPS27P21-201ENST00000486977 252 ntBASIC2.07□□□□□ -2.08
VRK1Q99986 MIR514B-201ENST00000516774 80 ntBASIC2.07□□□□□ -2.08
VRK1Q99986 AL160236.1-201ENST00000556317 195 ntBASIC2.07□□□□□ -2.08
VRK1Q99986 MIR4709-201ENST00000577272 72 ntBASIC2.07□□□□□ -2.08
VRK1Q99986 MIR4662B-201ENST00000579498 81 ntBASIC2.07□□□□□ -2.08
VRK1Q99986 MIR3945-201ENST00000581853 98 ntBASIC2.07□□□□□ -2.08
VRK1Q99986 ZNF720P1-201ENST00000562403 1939 ntBASIC2.07□□□□□ -2.08
VRK1Q99986 Y_RNA.441-201ENST00000384123 112 ntBASIC2.06□□□□□ -2.08
VRK1Q99986 RN7SKP51-201ENST00000410781 304 ntBASIC2.06□□□□□ -2.08
VRK1Q99986 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.06□□□□□ -2.08
VRK1Q99986 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.06□□□□□ -2.08
VRK1Q99986 SNRPGP8-201ENST00000454064 226 ntBASIC2.06□□□□□ -2.08
VRK1Q99986 RNA5SP57-201ENST00000459463 123 ntBASIC2.06□□□□□ -2.08
VRK1Q99986 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.06□□□□□ -2.08
VRK1Q99986 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.06□□□□□ -2.08
VRK1Q99986 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.06□□□□□ -2.08
VRK1Q99986 AC022254.1-201ENST00000567857 235 ntBASIC2.06□□□□□ -2.08
VRK1Q99986 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.05□□□□□ -2.08
VRK1Q99986 MIRLET7C-201ENST00000362160 84 ntBASIC2.05□□□□□ -2.08
VRK1Q99986 Y_RNA.464-201ENST00000384282 110 ntBASIC2.05□□□□□ -2.08
VRK1Q99986 SNORA67.4-201ENST00000384688 142 ntBASIC2.05□□□□□ -2.08
VRK1Q99986 MLLT10P1-201ENST00000418346 262 ntBASIC2.05□□□□□ -2.08
VRK1Q99986 AC244636.1-201ENST00000421152 228 ntBASIC2.05□□□□□ -2.08
VRK1Q99986 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.05□□□□□ -2.08
VRK1Q99986 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.05□□□□□ -2.08
VRK1Q99986 AC026436.1-201ENST00000510537 270 ntBASIC2.05□□□□□ -2.08
VRK1Q99986 RNA5SP153-201ENST00000516498 76 ntBASIC2.05□□□□□ -2.08
VRK1Q99986 RNU7-149P-201ENST00000516739 59 ntBASIC2.05□□□□□ -2.08
VRK1Q99986 MIR4431-201ENST00000579990 94 ntBASIC2.05□□□□□ -2.08
VRK1Q99986 AC008507.4-201ENST00000585464 127 ntBASIC2.05□□□□□ -2.08
VRK1Q99986 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.05□□□□□ -2.08
VRK1Q99986 AC027279.3-201ENST00000625055 122 ntBASIC2.05□□□□□ -2.08
VRK1Q99986 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.05□□□□□ -2.08
VRK1Q99986 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
VRK1Q99986 SNORD45.3-201ENST00000363836 72 ntBASIC2.04□□□□□ -2.08
VRK1Q99986 RNU6-484P-201ENST00000384016 107 ntBASIC2.04□□□□□ -2.08
VRK1Q99986 MIR17-201ENST00000385012 84 ntBASIC2.04□□□□□ -2.08
VRK1Q99986 MIR15B-201ENST00000385045 98 ntBASIC2.04□□□□□ -2.08
VRK1Q99986 MIR1261-201ENST00000408659 82 ntBASIC2.04□□□□□ -2.08
VRK1Q99986 RNA5SP425-201ENST00000410336 112 ntBASIC2.04□□□□□ -2.08
VRK1Q99986 Z98742.3-201ENST00000418637 326 ntBASIC2.04□□□□□ -2.08
VRK1Q99986 AL121914.1-201ENST00000450188 156 ntBASIC2.04□□□□□ -2.08
VRK1Q99986 RNU6-561P-201ENST00000516222 102 ntBASIC2.04□□□□□ -2.08
VRK1Q99986 RNU6-1299P-201ENST00000516316 100 ntBASIC2.04□□□□□ -2.08
VRK1Q99986 MIR4287-201ENST00000579398 78 ntBASIC2.04□□□□□ -2.08
VRK1Q99986 AC046143.2-201ENST00000609789 160 ntBASIC2.04□□□□□ -2.08
VRK1Q99986 AC021506.2-201ENST00000612354 169 ntBASIC2.04□□□□□ -2.08
VRK1Q99986 Pinc.1-201ENST00000616452 154 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms