Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 AC006461.1-201ENST00000412637 326 ntBASIC2.26□□□□□ -2.05
PNKPQ96T60 CST2P1-201ENST00000425770 87 ntBASIC2.26□□□□□ -2.05
PNKPQ96T60 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.26□□□□□ -2.05
PNKPQ96T60 AL163195.1-201ENST00000496941 348 ntBASIC2.26□□□□□ -2.05
PNKPQ96T60 RNA5SP200-201ENST00000516360 103 ntBASIC2.26□□□□□ -2.05
PNKPQ96T60 MIR5694-201ENST00000581190 76 ntBASIC2.26□□□□□ -2.05
PNKPQ96T60 AC092881.1-201ENST00000638218 2733 ntBASIC2.26□□□□□ -2.05
PNKPQ96T60 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
PNKPQ96T60 AC018630.2-201ENST00000534866 2403 ntBASIC2.26□□□□□ -2.05
PNKPQ96T60 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
PNKPQ96T60 RNU1-58P-201ENST00000362413 163 ntBASIC2.25□□□□□ -2.05
PNKPQ96T60 MIR29C-201ENST00000385231 88 ntBASIC2.25□□□□□ -2.05
PNKPQ96T60 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.25□□□□□ -2.05
PNKPQ96T60 SNRPGP8-201ENST00000454064 226 ntBASIC2.25□□□□□ -2.05
PNKPQ96T60 snoU13.23-201ENST00000458863 104 ntBASIC2.25□□□□□ -2.05
PNKPQ96T60 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.25□□□□□ -2.05
PNKPQ96T60 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.25□□□□□ -2.05
PNKPQ96T60 MIR4769-201ENST00000584126 77 ntBASIC2.25□□□□□ -2.05
PNKPQ96T60 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.25□□□□□ -2.05
PNKPQ96T60 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
PNKPQ96T60 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
PNKPQ96T60 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PNKPQ96T60 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PNKPQ96T60 SNORD45.3-201ENST00000363836 72 ntBASIC2.24□□□□□ -2.05
PNKPQ96T60 RNY3P5-201ENST00000384127 102 ntBASIC2.24□□□□□ -2.05
PNKPQ96T60 SNORA67.3-201ENST00000384366 140 ntBASIC2.24□□□□□ -2.05
PNKPQ96T60 MIR597-201ENST00000384968 97 ntBASIC2.24□□□□□ -2.05
PNKPQ96T60 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.24□□□□□ -2.05
PNKPQ96T60 RPS26P45-201ENST00000471748 340 ntBASIC2.24□□□□□ -2.05
PNKPQ96T60 AC107027.2-201ENST00000512197 115 ntBASIC2.24□□□□□ -2.05
PNKPQ96T60 RNU1-40P-201ENST00000516816 164 ntBASIC2.24□□□□□ -2.05
PNKPQ96T60 RNU1-97P-201ENST00000516872 164 ntBASIC2.24□□□□□ -2.05
PNKPQ96T60 RNU6-341P-201ENST00000516973 96 ntBASIC2.24□□□□□ -2.05
PNKPQ96T60 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.24□□□□□ -2.05
PNKPQ96T60 DEFB122-202ENST00000569013 197 ntBASIC2.24□□□□□ -2.05
PNKPQ96T60 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.24□□□□□ -2.05
PNKPQ96T60 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
PNKPQ96T60 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
PNKPQ96T60 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PNKPQ96T60 RNU6-151P-201ENST00000364158 107 ntBASIC2.23□□□□□ -2.05
PNKPQ96T60 RNU6-643P-201ENST00000384018 107 ntBASIC2.23□□□□□ -2.05
PNKPQ96T60 MIR515-2-201ENST00000384883 83 ntBASIC2.23□□□□□ -2.05
PNKPQ96T60 MIR515-1-201ENST00000384884 83 ntBASIC2.23□□□□□ -2.05
PNKPQ96T60 RNU11-3P-201ENST00000391111 133 ntBASIC2.23□□□□□ -2.05
PNKPQ96T60 AL591806.2-201ENST00000433122 173 ntBASIC2.23□□□□□ -2.05
PNKPQ96T60 SNORD11-201ENST00000459124 84 ntBASIC2.23□□□□□ -2.05
PNKPQ96T60 SNORD116-25-201ENST00000516517 92 ntBASIC2.23□□□□□ -2.05
PNKPQ96T60 RNU7-121P-201ENST00000516604 62 ntBASIC2.23□□□□□ -2.05
PNKPQ96T60 RNA5SP137-201ENST00000516833 135 ntBASIC2.23□□□□□ -2.05
PNKPQ96T60 MIR3910-1-201ENST00000580936 111 ntBASIC2.23□□□□□ -2.05
PNKPQ96T60 MIR2681-201ENST00000581814 105 ntBASIC2.23□□□□□ -2.05
PNKPQ96T60 MIR3935-201ENST00000583472 104 ntBASIC2.23□□□□□ -2.05
PNKPQ96T60 AC002984.1-201ENST00000591692 448 ntBASIC2.23□□□□□ -2.05
PNKPQ96T60 MTND1P7-201ENST00000632801 297 ntBASIC2.23□□□□□ -2.05
PNKPQ96T60 MIR3658-201ENST00000636291 56 ntBASIC2.23□□□□□ -2.05
PNKPQ96T60 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
PNKPQ96T60 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PNKPQ96T60 RNU11-5P-201ENST00000391216 129 ntBASIC2.22□□□□□ -2.05
PNKPQ96T60 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PNKPQ96T60 AL606517.2-201ENST00000442855 241 ntBASIC2.22□□□□□ -2.05
PNKPQ96T60 RNU6-406P-201ENST00000516470 107 ntBASIC2.22□□□□□ -2.05
PNKPQ96T60 SCARNA16.3-201ENST00000516595 184 ntBASIC2.22□□□□□ -2.05
PNKPQ96T60 AC024995.1-201ENST00000523014 93 ntBASIC2.22□□□□□ -2.05
PNKPQ96T60 AC015712.3-201ENST00000559380 164 ntBASIC2.22□□□□□ -2.05
PNKPQ96T60 MIR6840-201ENST00000611937 71 ntBASIC2.22□□□□□ -2.05
PNKPQ96T60 uc_338.4-201ENST00000616635 176 ntBASIC2.22□□□□□ -2.05
PNKPQ96T60 Y_RNA.778-201ENST00000620203 90 ntBASIC2.22□□□□□ -2.05
PNKPQ96T60 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.22□□□□□ -2.05
PNKPQ96T60 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PNKPQ96T60 ZNF702P-202ENST00000434269 1966 ntBASIC2.21□□□□□ -2.05
PNKPQ96T60 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PNKPQ96T60 SNORA1B-201ENST00000362535 133 ntBASIC2.21□□□□□ -2.06
PNKPQ96T60 Y_RNA.253-201ENST00000364562 112 ntBASIC2.21□□□□□ -2.06
PNKPQ96T60 SNORA67.1-201ENST00000364749 141 ntBASIC2.21□□□□□ -2.06
PNKPQ96T60 Y_RNA.400-201ENST00000383963 111 ntBASIC2.21□□□□□ -2.06
PNKPQ96T60 AL023284.1-201ENST00000403956 276 ntBASIC2.21□□□□□ -2.06
PNKPQ96T60 MIR1283-2-201ENST00000408621 87 ntBASIC2.21□□□□□ -2.06
PNKPQ96T60 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.21□□□□□ -2.06
PNKPQ96T60 RNA5SP364-201ENST00000516938 78 ntBASIC2.21□□□□□ -2.06
PNKPQ96T60 RNU1-104P-201ENST00000517280 175 ntBASIC2.21□□□□□ -2.06
PNKPQ96T60 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.21□□□□□ -2.06
PNKPQ96T60 AC005786.1-201ENST00000588553 154 ntBASIC2.21□□□□□ -2.06
PNKPQ96T60 JPX_2.1-201ENST00000614161 69 ntBASIC2.21□□□□□ -2.06
PNKPQ96T60 AL157777.2-201ENST00000258070 137 ntBASIC2.2□□□□□ -2.06
PNKPQ96T60 RNU6-484P-201ENST00000384016 107 ntBASIC2.2□□□□□ -2.06
PNKPQ96T60 SNORA48.3-201ENST00000391081 134 ntBASIC2.2□□□□□ -2.06
PNKPQ96T60 RNU4-43P-201ENST00000410628 137 ntBASIC2.2□□□□□ -2.06
PNKPQ96T60 HMGN1P7-201ENST00000491722 313 ntBASIC2.2□□□□□ -2.06
PNKPQ96T60 AC108210.2-201ENST00000503681 201 ntBASIC2.2□□□□□ -2.06
PNKPQ96T60 RNU6-789P-201ENST00000517105 102 ntBASIC2.2□□□□□ -2.06
PNKPQ96T60 MIR5094-201ENST00000578766 85 ntBASIC2.2□□□□□ -2.06
PNKPQ96T60 AC022217.4-201ENST00000604389 163 ntBASIC2.2□□□□□ -2.06
PNKPQ96T60 SNORD14A-201ENST00000606526 91 ntBASIC2.2□□□□□ -2.06
PNKPQ96T60 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.2□□□□□ -2.06
PNKPQ96T60 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.2□□□□□ -2.06
PNKPQ96T60 uc_338.20-201ENST00000621563 178 ntBASIC2.2□□□□□ -2.06
PNKPQ96T60 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
PNKPQ96T60 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PNKPQ96T60 Y_RNA.215-201ENST00000364204 112 ntBASIC2.19□□□□□ -2.06
PNKPQ96T60 RNU4-11P-201ENST00000365287 132 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 242 ms