Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 NDUFA4P2-201ENST00000489989 244 ntBASIC2.58□□□□□ -2
CDK5RAP1Q96SZ6 RNU6-365P-201ENST00000517113 106 ntBASIC2.58□□□□□ -2
CDK5RAP1Q96SZ6 RNU6-1270P-201ENST00000517128 108 ntBASIC2.58□□□□□ -2
CDK5RAP1Q96SZ6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.58□□□□□ -2
CDK5RAP1Q96SZ6 AC018630.3-201ENST00000542637 96 ntBASIC2.58□□□□□ -2
CDK5RAP1Q96SZ6 MIR5194-201ENST00000582634 120 ntBASIC2.58□□□□□ -2
CDK5RAP1Q96SZ6 AL356280.1-201ENST00000603614 379 ntBASIC2.58□□□□□ -2
CDK5RAP1Q96SZ6 AC009831.4-201ENST00000620744 325 ntBASIC2.58□□□□□ -2
CDK5RAP1Q96SZ6 MIR1248-201ENST00000629190 106 ntBASIC2.58□□□□□ -2
CDK5RAP1Q96SZ6 MIR7515-201ENST00000637837 67 ntBASIC2.58□□□□□ -2
CDK5RAP1Q96SZ6 RNA5SP125-201ENST00000364843 120 ntBASIC2.57□□□□□ -2
CDK5RAP1Q96SZ6 Y_RNA.366-201ENST00000365540 102 ntBASIC2.57□□□□□ -2
CDK5RAP1Q96SZ6 MIR624-201ENST00000385217 97 ntBASIC2.57□□□□□ -2
CDK5RAP1Q96SZ6 SNORD12C-201ENST00000386307 89 ntBASIC2.57□□□□□ -2
CDK5RAP1Q96SZ6 SNORD72-201ENST00000390994 80 ntBASIC2.57□□□□□ -2
CDK5RAP1Q96SZ6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.57□□□□□ -2
CDK5RAP1Q96SZ6 RPS12P2-201ENST00000439728 269 ntBASIC2.57□□□□□ -2
CDK5RAP1Q96SZ6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.57□□□□□ -2
CDK5RAP1Q96SZ6 AC097462.1-201ENST00000514125 324 ntBASIC2.57□□□□□ -2
CDK5RAP1Q96SZ6 AC007012.1-201ENST00000567192 175 ntBASIC2.57□□□□□ -2
CDK5RAP1Q96SZ6 MIR4438-201ENST00000585271 93 ntBASIC2.57□□□□□ -2
CDK5RAP1Q96SZ6 MIR376A2-201ENST00000636782 80 ntBASIC2.57□□□□□ -2
CDK5RAP1Q96SZ6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
CDK5RAP1Q96SZ6 AC016717.2-201ENST00000609089 5141 ntBASIC2.57□□□□□ -2
CDK5RAP1Q96SZ6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.57□□□□□ -2
CDK5RAP1Q96SZ6 ZNF271P-202ENST00000465539 1970 ntBASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 RNU6-743P-201ENST00000364151 106 ntBASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 Y_RNA.281-201ENST00000364774 94 ntBASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 RNU6-294P-201ENST00000364999 102 ntBASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 Y_RNA.328-201ENST00000365208 113 ntBASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 MIR488-201ENST00000365739 83 ntBASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 RNU6-756P-201ENST00000383997 107 ntBASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 SNORA67.4-201ENST00000384688 142 ntBASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 RNU6-1072P-201ENST00000384703 107 ntBASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 RNU6-443P-201ENST00000384780 107 ntBASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 SNORA12.1-201ENST00000390873 148 ntBASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 RNY4P29-201ENST00000410801 97 ntBASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 AF228730.3-201ENST00000436691 102 ntBASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 MIR4765-201ENST00000585007 77 ntBASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 AL049779.4-201ENST00000604500 156 ntBASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 RPL17P51-201ENST00000605218 238 ntBASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 U6.73-201ENST00000619194 103 ntBASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
CDK5RAP1Q96SZ6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 Y_RNA.85-201ENST00000363014 111 ntBASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 SNORA67.1-201ENST00000364749 141 ntBASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 SNORD31B-201ENST00000364977 69 ntBASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 DEFA7P-201ENST00000382676 285 ntBASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 RNU1-138P-201ENST00000384093 164 ntBASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 SNORD61-201ENST00000384252 73 ntBASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 MIR29B2-201ENST00000385055 81 ntBASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 OR9P1P-201ENST00000496431 281 ntBASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 MRPS17P9-201ENST00000511924 393 ntBASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 RNU6-109P-201ENST00000516364 107 ntBASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 RNU6-184P-201ENST00000516514 107 ntBASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 RNU7-172P-201ENST00000517125 64 ntBASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 AL365205.2-201ENST00000594586 68 ntBASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 uc_338.14-201ENST00000613162 166 ntBASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 AP001318.4-201ENST00000616637 121 ntBASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 AL591926.4-201ENST00000616895 298 ntBASIC2.55□□□□□ -2
CDK5RAP1Q96SZ6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 SNORA63.5-201ENST00000363548 123 ntBASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 Y_RNA.163-201ENST00000363702 113 ntBASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 SNORD114-30-201ENST00000364448 72 ntBASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 RNU6-1240P-201ENST00000365155 104 ntBASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 SNORA51.5-201ENST00000384126 131 ntBASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 RNY1P7-201ENST00000384743 110 ntBASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 SNORA19.1-201ENST00000410656 129 ntBASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 RNU6-1328P-201ENST00000410938 106 ntBASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 Y_RNA.621-201ENST00000411065 96 ntBASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 RNA5SP508-201ENST00000411327 119 ntBASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 AC234781.5-201ENST00000508429 271 ntBASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 Y_RNA.666-201ENST00000516187 112 ntBASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 RNU6-1149P-201ENST00000516810 97 ntBASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 MIR1291-201ENST00000627649 87 ntBASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDK5RAP1Q96SZ6 RNU6-1235P-201ENST00000384559 107 ntBASIC2.53□□□□□ -2
CDK5RAP1Q96SZ6 MIR548A2-201ENST00000384956 97 ntBASIC2.53□□□□□ -2
CDK5RAP1Q96SZ6 MT-TI-201ENST00000387365 69 ntBASIC2.53□□□□□ -2
CDK5RAP1Q96SZ6 MIR1302-4-201ENST00000408701 150 ntBASIC2.53□□□□□ -2
CDK5RAP1Q96SZ6 RNA5SP181-201ENST00000410246 98 ntBASIC2.53□□□□□ -2
CDK5RAP1Q96SZ6 HMGN2P18-201ENST00000450680 270 ntBASIC2.53□□□□□ -2
CDK5RAP1Q96SZ6 RNU6-498P-201ENST00000459468 107 ntBASIC2.53□□□□□ -2
CDK5RAP1Q96SZ6 RNU6-948P-201ENST00000516374 107 ntBASIC2.53□□□□□ -2
CDK5RAP1Q96SZ6 RNU6-1096P-201ENST00000517089 102 ntBASIC2.53□□□□□ -2
CDK5RAP1Q96SZ6 AC103810.6-201ENST00000606708 136 ntBASIC2.53□□□□□ -2
CDK5RAP1Q96SZ6 MIR6073-201ENST00000352083 89 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms