Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SNORA26.5-201ENST00000391215 123 ntBASIC1.47□□□□□ -2.17
NR1H4Q96RI1 RNU2-14P-201ENST00000411053 191 ntBASIC1.47□□□□□ -2.17
NR1H4Q96RI1 RN7SKP101-201ENST00000411376 320 ntBASIC1.47□□□□□ -2.17
NR1H4Q96RI1 MTND5P22-201ENST00000458380 195 ntBASIC1.47□□□□□ -2.17
NR1H4Q96RI1 TRBVB-201ENST00000477100 408 ntBASIC1.47□□□□□ -2.17
NR1H4Q96RI1 AC091959.1-201ENST00000495857 238 ntBASIC1.47□□□□□ -2.17
NR1H4Q96RI1 SERF1AP1-201ENST00000514575 187 ntBASIC1.47□□□□□ -2.17
NR1H4Q96RI1 RNU6-1338P-201ENST00000516328 91 ntBASIC1.47□□□□□ -2.17
NR1H4Q96RI1 RN7SKP88-201ENST00000516847 250 ntBASIC1.47□□□□□ -2.17
NR1H4Q96RI1 MIR4719-201ENST00000585233 84 ntBASIC1.47□□□□□ -2.17
NR1H4Q96RI1 AL357312.1-201ENST00000603879 298 ntBASIC1.47□□□□□ -2.17
NR1H4Q96RI1 7SK.8-201ENST00000612110 250 ntBASIC1.47□□□□□ -2.17
NR1H4Q96RI1 7SK.11-201ENST00000615477 250 ntBASIC1.47□□□□□ -2.17
NR1H4Q96RI1 7SK.13-201ENST00000622040 250 ntBASIC1.47□□□□□ -2.17
NR1H4Q96RI1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
NR1H4Q96RI1 AC134026.1-201ENST00000623249 2239 ntBASIC1.46□□□□□ -2.18
NR1H4Q96RI1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
NR1H4Q96RI1 RNU6-238P-201ENST00000363313 106 ntBASIC1.46□□□□□ -2.18
NR1H4Q96RI1 RNU6-144P-201ENST00000383951 107 ntBASIC1.46□□□□□ -2.18
NR1H4Q96RI1 MIR150-201ENST00000385048 84 ntBASIC1.46□□□□□ -2.18
NR1H4Q96RI1 MIR9-3-201ENST00000385084 90 ntBASIC1.46□□□□□ -2.18
NR1H4Q96RI1 RNU6-763P-201ENST00000390865 106 ntBASIC1.46□□□□□ -2.18
NR1H4Q96RI1 MTATP8P1-201ENST00000467115 207 ntBASIC1.46□□□□□ -2.18
NR1H4Q96RI1 RNU1-41P-201ENST00000516161 162 ntBASIC1.46□□□□□ -2.18
NR1H4Q96RI1 RNU1-48P-201ENST00000516400 162 ntBASIC1.46□□□□□ -2.18
NR1H4Q96RI1 SNORD45.4-201ENST00000516629 73 ntBASIC1.46□□□□□ -2.18
NR1H4Q96RI1 SCARNA24.2-201ENST00000516968 130 ntBASIC1.46□□□□□ -2.18
NR1H4Q96RI1 AC005357.1-201ENST00000588399 301 ntBASIC1.46□□□□□ -2.18
NR1H4Q96RI1 GHRLOS.1-201ENST00000610995 70 ntBASIC1.46□□□□□ -2.18
NR1H4Q96RI1 MIR8081-201ENST00000611533 95 ntBASIC1.46□□□□□ -2.18
NR1H4Q96RI1 Y_RNA.16-201ENST00000362421 102 ntBASIC1.45□□□□□ -2.18
NR1H4Q96RI1 RNU6-1272P-201ENST00000362776 107 ntBASIC1.45□□□□□ -2.18
NR1H4Q96RI1 Y_RNA.176-201ENST00000363815 109 ntBASIC1.45□□□□□ -2.18
NR1H4Q96RI1 RNU6-674P-201ENST00000363831 107 ntBASIC1.45□□□□□ -2.18
NR1H4Q96RI1 SNORD14E-201ENST00000364009 85 ntBASIC1.45□□□□□ -2.18
NR1H4Q96RI1 Y_RNA.242-201ENST00000364473 110 ntBASIC1.45□□□□□ -2.18
NR1H4Q96RI1 MIR653-201ENST00000385279 96 ntBASIC1.45□□□□□ -2.18
NR1H4Q96RI1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
NR1H4Q96RI1 RNU6-1203P-201ENST00000410703 110 ntBASIC1.45□□□□□ -2.18
NR1H4Q96RI1 BTF3P11-201ENST00000426582 477 ntBASIC1.45□□□□□ -2.18
NR1H4Q96RI1 AC023449.1-201ENST00000454464 154 ntBASIC1.45□□□□□ -2.18
NR1H4Q96RI1 SNORA27.4-201ENST00000516650 95 ntBASIC1.45□□□□□ -2.18
NR1H4Q96RI1 AC008269.2-201ENST00000561915 1105 ntBASIC1.45□□□□□ -2.18
NR1H4Q96RI1 MIR3664-201ENST00000579074 99 ntBASIC1.45□□□□□ -2.18
NR1H4Q96RI1 MIR8065-201ENST00000620577 100 ntBASIC1.45□□□□□ -2.18
NR1H4Q96RI1 AC084768.2-201ENST00000622736 221 ntBASIC1.45□□□□□ -2.18
NR1H4Q96RI1 SNORA63C-201ENST00000364578 129 ntBASIC1.44□□□□□ -2.18
NR1H4Q96RI1 Y_RNA.459-201ENST00000384251 102 ntBASIC1.44□□□□□ -2.18
NR1H4Q96RI1 MIR1302-6-201ENST00000408466 90 ntBASIC1.44□□□□□ -2.18
NR1H4Q96RI1 RPS29P23-201ENST00000458635 123 ntBASIC1.44□□□□□ -2.18
NR1H4Q96RI1 RNA5SP182-201ENST00000516064 82 ntBASIC1.44□□□□□ -2.18
NR1H4Q96RI1 RNU6-917P-201ENST00000516294 104 ntBASIC1.44□□□□□ -2.18
NR1H4Q96RI1 DEFB108E-201ENST00000524692 240 ntBASIC1.44□□□□□ -2.18
NR1H4Q96RI1 FAM106DP-201ENST00000586416 501 ntBASIC1.44□□□□□ -2.18
NR1H4Q96RI1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
NR1H4Q96RI1 AC013791.1-201ENST00000616619 62 ntBASIC1.44□□□□□ -2.18
NR1H4Q96RI1 RNU6-1209P-201ENST00000363655 107 ntBASIC1.43□□□□□ -2.18
NR1H4Q96RI1 Y_RNA.336-201ENST00000365307 109 ntBASIC1.43□□□□□ -2.18
NR1H4Q96RI1 RNU6-662P-201ENST00000384253 104 ntBASIC1.43□□□□□ -2.18
NR1H4Q96RI1 RNU6-738P-201ENST00000384531 106 ntBASIC1.43□□□□□ -2.18
NR1H4Q96RI1 MIR15B-201ENST00000385045 98 ntBASIC1.43□□□□□ -2.18
NR1H4Q96RI1 snoU13.26-201ENST00000459452 105 ntBASIC1.43□□□□□ -2.18
NR1H4Q96RI1 RNU6-250P-201ENST00000516958 103 ntBASIC1.43□□□□□ -2.18
NR1H4Q96RI1 CYP3A52P-201ENST00000563326 91 ntBASIC1.43□□□□□ -2.18
NR1H4Q96RI1 MIR367-201ENST00000362299 68 ntBASIC1.42□□□□□ -2.18
NR1H4Q96RI1 Y_RNA.14-201ENST00000362415 103 ntBASIC1.42□□□□□ -2.18
NR1H4Q96RI1 RNU6-969P-201ENST00000383900 105 ntBASIC1.42□□□□□ -2.18
NR1H4Q96RI1 Y_RNA.574-201ENST00000384766 95 ntBASIC1.42□□□□□ -2.18
NR1H4Q96RI1 MIR1298-201ENST00000408783 112 ntBASIC1.42□□□□□ -2.18
NR1H4Q96RI1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.42□□□□□ -2.18
NR1H4Q96RI1 RPL39P39-201ENST00000455840 151 ntBASIC1.42□□□□□ -2.18
NR1H4Q96RI1 RNA5SP61-201ENST00000516453 100 ntBASIC1.42□□□□□ -2.18
NR1H4Q96RI1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.42□□□□□ -2.18
NR1H4Q96RI1 RPL23AP91-201ENST00000569211 455 ntBASIC1.42□□□□□ -2.18
NR1H4Q96RI1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.42□□□□□ -2.18
NR1H4Q96RI1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.42□□□□□ -2.18
NR1H4Q96RI1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
NR1H4Q96RI1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
NR1H4Q96RI1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
NR1H4Q96RI1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
NR1H4Q96RI1 AL391987.6-201ENST00000305671 199 ntBASIC1.41□□□□□ -2.18
NR1H4Q96RI1 UBE2WP1-201ENST00000362030 340 ntBASIC1.41□□□□□ -2.18
NR1H4Q96RI1 SNORD114-1-201ENST00000362705 72 ntBASIC1.41□□□□□ -2.18
NR1H4Q96RI1 Y_RNA.149-201ENST00000363558 117 ntBASIC1.41□□□□□ -2.18
NR1H4Q96RI1 Y_RNA.796-201ENST00000364268 102 ntBASIC1.41□□□□□ -2.18
NR1H4Q96RI1 Y_RNA.293-201ENST00000364908 93 ntBASIC1.41□□□□□ -2.18
NR1H4Q96RI1 Y_RNA.799-201ENST00000364992 102 ntBASIC1.41□□□□□ -2.18
NR1H4Q96RI1 SNORD50B-201ENST00000364995 70 ntBASIC1.41□□□□□ -2.18
NR1H4Q96RI1 Y_RNA.376-201ENST00000365638 108 ntBASIC1.41□□□□□ -2.18
NR1H4Q96RI1 Y_RNA.461-201ENST00000384263 103 ntBASIC1.41□□□□□ -2.18
NR1H4Q96RI1 MIR136-201ENST00000385207 82 ntBASIC1.41□□□□□ -2.18
NR1H4Q96RI1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.41□□□□□ -2.18
NR1H4Q96RI1 AL117187.1-201ENST00000555482 181 ntBASIC1.41□□□□□ -2.18
NR1H4Q96RI1 MIR5692C2-201ENST00000577959 77 ntBASIC1.41□□□□□ -2.18
NR1H4Q96RI1 MIR6715A-201ENST00000615929 79 ntBASIC1.41□□□□□ -2.18
NR1H4Q96RI1 MIR8062-201ENST00000621515 85 ntBASIC1.41□□□□□ -2.18
NR1H4Q96RI1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.41□□□□□ -2.18
NR1H4Q96RI1 Y_RNA.44-201ENST00000362676 108 ntBASIC1.4□□□□□ -2.19
NR1H4Q96RI1 RNU6-442P-201ENST00000383968 104 ntBASIC1.4□□□□□ -2.19
NR1H4Q96RI1 Y_RNA.512-201ENST00000384518 102 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 347.2 ms