Protein–RNA interactions for Protein: Q96QS3

ARX, Homeobox protein ARX, humanhuman

Predictions only

Length 562 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARXQ96QS3 AP001328.1-201ENST00000528550 176 ntBASIC3.65□□□□□ -1.83
ARXQ96QS3 AL359881.1-201ENST00000602916 267 ntBASIC3.65□□□□□ -1.83
ARXQ96QS3 AL049861.1-201ENST00000603130 150 ntBASIC3.65□□□□□ -1.83
ARXQ96QS3 AL773524.1-201ENST00000614065 229 ntBASIC3.65□□□□□ -1.83
ARXQ96QS3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
ARXQ96QS3 SNORA25.7-201ENST00000364375 127 ntBASIC3.64□□□□□ -1.83
ARXQ96QS3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.64□□□□□ -1.83
ARXQ96QS3 MIR9-1-201ENST00000385198 89 ntBASIC3.64□□□□□ -1.83
ARXQ96QS3 RNA5SP323-201ENST00000391094 133 ntBASIC3.64□□□□□ -1.83
ARXQ96QS3 RNU6-735P-201ENST00000410612 107 ntBASIC3.64□□□□□ -1.83
ARXQ96QS3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.64□□□□□ -1.83
ARXQ96QS3 AL021707.8-201ENST00000609428 183 ntBASIC3.64□□□□□ -1.83
ARXQ96QS3 JPX_2.1-201ENST00000614161 69 ntBASIC3.64□□□□□ -1.83
ARXQ96QS3 U6.73-201ENST00000619194 103 ntBASIC3.64□□□□□ -1.83
ARXQ96QS3 AP001340.1-201ENST00000624405 217 ntBASIC3.64□□□□□ -1.83
ARXQ96QS3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
ARXQ96QS3 AC007336.1-201ENST00000576365 3828 ntBASIC3.63□□□□□ -1.83
ARXQ96QS3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ARXQ96QS3 Y_RNA.127-201ENST00000363386 109 ntBASIC3.63□□□□□ -1.83
ARXQ96QS3 RNA5SP99-201ENST00000364020 114 ntBASIC3.63□□□□□ -1.83
ARXQ96QS3 MIR1289-2-201ENST00000408360 111 ntBASIC3.63□□□□□ -1.83
ARXQ96QS3 AC069257.2-201ENST00000441819 155 ntBASIC3.63□□□□□ -1.83
ARXQ96QS3 RPS4XP11-201ENST00000446897 772 ntBASIC3.63□□□□□ -1.83
ARXQ96QS3 RNA5SP233-201ENST00000459153 113 ntBASIC3.63□□□□□ -1.83
ARXQ96QS3 RNVU1-2-201ENST00000516326 135 ntBASIC3.63□□□□□ -1.83
ARXQ96QS3 RNA5SP153-201ENST00000516498 76 ntBASIC3.63□□□□□ -1.83
ARXQ96QS3 AC011604.1-201ENST00000545978 196 ntBASIC3.63□□□□□ -1.83
ARXQ96QS3 RPL23AP91-201ENST00000569211 455 ntBASIC3.63□□□□□ -1.83
ARXQ96QS3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.63□□□□□ -1.83
ARXQ96QS3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ARXQ96QS3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
ARXQ96QS3 AL596028.1-201ENST00000326971 197 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 SNORD116-14-201ENST00000383894 92 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 SNORD116-17-201ENST00000383929 92 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 SNORD116-15-201ENST00000384445 92 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 Y_RNA.542-201ENST00000384641 111 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 SNORD116-19-201ENST00000384729 92 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 MIR144-201ENST00000384886 86 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 RNU6-588P-201ENST00000410281 105 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 RNU2-70P-201ENST00000410718 179 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 RNU2-7P-201ENST00000410794 178 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.62□□□□□ -1.83
ARXQ96QS3 AC244636.1-201ENST00000421152 228 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 RNU7-197P-201ENST00000458836 62 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 RPS27P21-201ENST00000486977 252 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 RN7SKP43-201ENST00000516173 320 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 MIR4662B-201ENST00000579498 81 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 AL929325.1-201ENST00000603096 117 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 U2.20-201ENST00000613956 192 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 uc_338.4-201ENST00000616635 176 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.62□□□□□ -1.83
ARXQ96QS3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ARXQ96QS3 RNU1-112P-201ENST00000364401 164 ntBASIC3.61□□□□□ -1.83
ARXQ96QS3 RNU6-80P-201ENST00000384195 107 ntBASIC3.61□□□□□ -1.83
ARXQ96QS3 Z98742.3-201ENST00000418637 326 ntBASIC3.61□□□□□ -1.83
ARXQ96QS3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.61□□□□□ -1.83
ARXQ96QS3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.61□□□□□ -1.83
ARXQ96QS3 AC092991.1-201ENST00000477176 376 ntBASIC3.61□□□□□ -1.83
ARXQ96QS3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.61□□□□□ -1.83
ARXQ96QS3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.61□□□□□ -1.83
ARXQ96QS3 U7.2-201ENST00000607576 63 ntBASIC3.61□□□□□ -1.83
ARXQ96QS3 MIR338-201ENST00000636369 67 ntBASIC3.61□□□□□ -1.83
ARXQ96QS3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ARXQ96QS3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
ARXQ96QS3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
ARXQ96QS3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
ARXQ96QS3 Y_RNA.71-201ENST00000362892 104 ntBASIC3.6□□□□□ -1.83
ARXQ96QS3 RNA5SP205-201ENST00000364653 136 ntBASIC3.6□□□□□ -1.83
ARXQ96QS3 SNORA8-201ENST00000384574 139 ntBASIC3.6□□□□□ -1.83
ARXQ96QS3 RNU6-1333P-201ENST00000516162 93 ntBASIC3.6□□□□□ -1.83
ARXQ96QS3 RNU2-56P-201ENST00000516826 190 ntBASIC3.6□□□□□ -1.83
ARXQ96QS3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.6□□□□□ -1.83
ARXQ96QS3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.6□□□□□ -1.83
ARXQ96QS3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ARXQ96QS3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ARXQ96QS3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ARXQ96QS3 RNU6-1019P-201ENST00000364424 107 ntBASIC3.59□□□□□ -1.83
ARXQ96QS3 MIR562-201ENST00000384894 95 ntBASIC3.59□□□□□ -1.83
ARXQ96QS3 Y_RNA.584-201ENST00000391090 114 ntBASIC3.59□□□□□ -1.83
ARXQ96QS3 AL138827.1-201ENST00000402666 306 ntBASIC3.59□□□□□ -1.83
ARXQ96QS3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.59□□□□□ -1.83
ARXQ96QS3 Y_RNA.621-201ENST00000411065 96 ntBASIC3.59□□□□□ -1.83
ARXQ96QS3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.59□□□□□ -1.83
ARXQ96QS3 MIR4299-201ENST00000577899 72 ntBASIC3.59□□□□□ -1.83
ARXQ96QS3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.59□□□□□ -1.83
ARXQ96QS3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
ARXQ96QS3 Y_RNA.273-201ENST00000364703 102 ntBASIC3.58□□□□□ -1.84
ARXQ96QS3 RNU6-1186P-201ENST00000410429 97 ntBASIC3.58□□□□□ -1.84
ARXQ96QS3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.58□□□□□ -1.84
ARXQ96QS3 AC018634.1-201ENST00000437554 401 ntBASIC3.58□□□□□ -1.84
ARXQ96QS3 RNU4-57P-201ENST00000515980 135 ntBASIC3.58□□□□□ -1.84
ARXQ96QS3 SNORD77.4-201ENST00000516158 81 ntBASIC3.58□□□□□ -1.84
ARXQ96QS3 RNU7-99P-201ENST00000516271 62 ntBASIC3.58□□□□□ -1.84
ARXQ96QS3 RNA5SP76-201ENST00000516277 87 ntBASIC3.58□□□□□ -1.84
ARXQ96QS3 RNU6-1096P-201ENST00000517089 102 ntBASIC3.58□□□□□ -1.84
ARXQ96QS3 Y_RNA.757-201ENST00000578934 114 ntBASIC3.58□□□□□ -1.84
ARXQ96QS3 AC120024.3-201ENST00000603167 156 ntBASIC3.58□□□□□ -1.84
ARXQ96QS3 AL627230.6-201ENST00000611129 280 ntBASIC3.58□□□□□ -1.84
ARXQ96QS3 AL359075.3-201ENST00000613288 217 ntBASIC3.58□□□□□ -1.84
ARXQ96QS3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms