Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SHISA4Q96DD7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SHISA4Q96DD7 SNORA25.6-201ENST00000364121 118 ntBASIC2.86□□□□□ -1.95
SHISA4Q96DD7 Y_RNA.621-201ENST00000411065 96 ntBASIC2.86□□□□□ -1.95
SHISA4Q96DD7 MICF-203ENST00000432679 129 ntBASIC2.86□□□□□ -1.95
SHISA4Q96DD7 AF228730.3-201ENST00000436691 102 ntBASIC2.86□□□□□ -1.95
SHISA4Q96DD7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SHISA4Q96DD7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.86□□□□□ -1.95
SHISA4Q96DD7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.86□□□□□ -1.95
SHISA4Q96DD7 AC007536.1-201ENST00000533382 349 ntBASIC2.86□□□□□ -1.95
SHISA4Q96DD7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.86□□□□□ -1.95
SHISA4Q96DD7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.86□□□□□ -1.95
SHISA4Q96DD7 AC110079.1-202ENST00000635213 138 ntBASIC2.86□□□□□ -1.95
SHISA4Q96DD7 MIR7157-201ENST00000635801 60 ntBASIC2.86□□□□□ -1.95
SHISA4Q96DD7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SHISA4Q96DD7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SHISA4Q96DD7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHISA4Q96DD7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHISA4Q96DD7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHISA4Q96DD7 AL353746.1-201ENST00000566293 6881 ntBASIC2.85□□□□□ -1.95
SHISA4Q96DD7 RNA5SP456-201ENST00000364002 114 ntBASIC2.85□□□□□ -1.95
SHISA4Q96DD7 RNU6-1164P-201ENST00000364428 107 ntBASIC2.85□□□□□ -1.95
SHISA4Q96DD7 MIR548A1-201ENST00000385041 97 ntBASIC2.85□□□□□ -1.95
SHISA4Q96DD7 MIRLET7F2-201ENST00000385277 83 ntBASIC2.85□□□□□ -1.95
SHISA4Q96DD7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SHISA4Q96DD7 RNU2-32P-201ENST00000411193 191 ntBASIC2.85□□□□□ -1.95
SHISA4Q96DD7 MTCO1P44-201ENST00000441935 243 ntBASIC2.85□□□□□ -1.95
SHISA4Q96DD7 AL021397.1-201ENST00000451806 248 ntBASIC2.85□□□□□ -1.95
SHISA4Q96DD7 AC234781.5-201ENST00000508429 271 ntBASIC2.85□□□□□ -1.95
SHISA4Q96DD7 RNU6-1146P-201ENST00000516282 102 ntBASIC2.85□□□□□ -1.95
SHISA4Q96DD7 RNU6-1096P-201ENST00000517089 102 ntBASIC2.85□□□□□ -1.95
SHISA4Q96DD7 SCARNA3-201ENST00000517097 143 ntBASIC2.85□□□□□ -1.95
SHISA4Q96DD7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.85□□□□□ -1.95
SHISA4Q96DD7 U6.73-201ENST00000619194 103 ntBASIC2.85□□□□□ -1.95
SHISA4Q96DD7 MIR5739-201ENST00000619803 80 ntBASIC2.85□□□□□ -1.95
SHISA4Q96DD7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SHISA4Q96DD7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SHISA4Q96DD7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.84□□□□□ -1.95
SHISA4Q96DD7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
SHISA4Q96DD7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SHISA4Q96DD7 Y_RNA.66-201ENST00000362862 102 ntBASIC2.84□□□□□ -1.95
SHISA4Q96DD7 RNU6-508P-201ENST00000363231 103 ntBASIC2.84□□□□□ -1.95
SHISA4Q96DD7 SNORA26.7-201ENST00000391288 122 ntBASIC2.84□□□□□ -1.95
SHISA4Q96DD7 AC123900.1-201ENST00000420390 96 ntBASIC2.84□□□□□ -1.95
SHISA4Q96DD7 AC018634.1-201ENST00000437554 401 ntBASIC2.84□□□□□ -1.95
SHISA4Q96DD7 RPS12P2-201ENST00000439728 269 ntBASIC2.84□□□□□ -1.95
SHISA4Q96DD7 AL031737.1-201ENST00000450125 223 ntBASIC2.84□□□□□ -1.95
SHISA4Q96DD7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.84□□□□□ -1.95
SHISA4Q96DD7 AC007751.1-201ENST00000529260 376 ntBASIC2.84□□□□□ -1.95
SHISA4Q96DD7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.84□□□□□ -1.95
SHISA4Q96DD7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.84□□□□□ -1.95
SHISA4Q96DD7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SHISA4Q96DD7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.84□□□□□ -1.96
SHISA4Q96DD7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SHISA4Q96DD7 MTND5P18-201ENST00000445624 1801 ntBASIC2.84□□□□□ -1.96
SHISA4Q96DD7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.84□□□□□ -1.96
SHISA4Q96DD7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
SHISA4Q96DD7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SHISA4Q96DD7 Y_RNA.242-201ENST00000364473 110 ntBASIC2.83□□□□□ -1.96
SHISA4Q96DD7 RNU6-1292P-201ENST00000383856 107 ntBASIC2.83□□□□□ -1.96
SHISA4Q96DD7 MIR218-1-201ENST00000384999 110 ntBASIC2.83□□□□□ -1.96
SHISA4Q96DD7 RPS15AP28-201ENST00000435088 386 ntBASIC2.83□□□□□ -1.96
SHISA4Q96DD7 CYP2C59P-201ENST00000457790 269 ntBASIC2.83□□□□□ -1.96
SHISA4Q96DD7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.83□□□□□ -1.96
SHISA4Q96DD7 RNU6-412P-201ENST00000516434 106 ntBASIC2.83□□□□□ -1.96
SHISA4Q96DD7 MIR3129-201ENST00000581095 76 ntBASIC2.83□□□□□ -1.96
SHISA4Q96DD7 AC046143.2-201ENST00000609789 160 ntBASIC2.83□□□□□ -1.96
SHISA4Q96DD7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SHISA4Q96DD7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SHISA4Q96DD7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SHISA4Q96DD7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.82□□□□□ -1.96
SHISA4Q96DD7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHISA4Q96DD7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.82□□□□□ -1.96
SHISA4Q96DD7 MIR21-201ENST00000362134 72 ntBASIC2.82□□□□□ -1.96
SHISA4Q96DD7 RNU6-32P-201ENST00000383948 107 ntBASIC2.82□□□□□ -1.96
SHISA4Q96DD7 RNU6-13P-201ENST00000384248 107 ntBASIC2.82□□□□□ -1.96
SHISA4Q96DD7 RNU6-12P-201ENST00000384604 107 ntBASIC2.82□□□□□ -1.96
SHISA4Q96DD7 RNU6-41P-201ENST00000384741 107 ntBASIC2.82□□□□□ -1.96
SHISA4Q96DD7 FO393413.1-201ENST00000402892 195 ntBASIC2.82□□□□□ -1.96
SHISA4Q96DD7 MIR1287-201ENST00000408492 90 ntBASIC2.82□□□□□ -1.96
SHISA4Q96DD7 AL161788.1-201ENST00000441805 169 ntBASIC2.82□□□□□ -1.96
SHISA4Q96DD7 HMGN1P7-201ENST00000491722 313 ntBASIC2.82□□□□□ -1.96
SHISA4Q96DD7 AC093259.1-201ENST00000509755 300 ntBASIC2.82□□□□□ -1.96
SHISA4Q96DD7 RNU6-856P-201ENST00000516959 98 ntBASIC2.82□□□□□ -1.96
SHISA4Q96DD7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.82□□□□□ -1.96
SHISA4Q96DD7 MIR5582-201ENST00000579697 68 ntBASIC2.82□□□□□ -1.96
SHISA4Q96DD7 MIR3199-1-201ENST00000582434 88 ntBASIC2.82□□□□□ -1.96
SHISA4Q96DD7 MIR5092-201ENST00000583139 88 ntBASIC2.82□□□□□ -1.96
SHISA4Q96DD7 U2.20-201ENST00000613956 192 ntBASIC2.82□□□□□ -1.96
SHISA4Q96DD7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHISA4Q96DD7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHISA4Q96DD7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SHISA4Q96DD7 RNU6-743P-201ENST00000364151 106 ntBASIC2.81□□□□□ -1.96
SHISA4Q96DD7 Y_RNA.495-201ENST00000384435 112 ntBASIC2.81□□□□□ -1.96
SHISA4Q96DD7 MIR1263-201ENST00000408324 86 ntBASIC2.81□□□□□ -1.96
SHISA4Q96DD7 HMGN2P34-201ENST00000437647 269 ntBASIC2.81□□□□□ -1.96
SHISA4Q96DD7 RPS29P24-201ENST00000486345 171 ntBASIC2.81□□□□□ -1.96
SHISA4Q96DD7 PRELID2P1-201ENST00000552837 301 ntBASIC2.81□□□□□ -1.96
SHISA4Q96DD7 AC073413.2-201ENST00000604332 360 ntBASIC2.81□□□□□ -1.96
SHISA4Q96DD7 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 229.6 ms