Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 RNU6-693P-201ENST00000516134 107 ntBASIC3.29□□□□□ -1.88
VTI1AQ96AJ9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.29□□□□□ -1.88
VTI1AQ96AJ9 AP002004.2-201ENST00000531656 154 ntBASIC3.29□□□□□ -1.88
VTI1AQ96AJ9 AC091544.4-201ENST00000555268 342 ntBASIC3.29□□□□□ -1.88
VTI1AQ96AJ9 MIR376A2-201ENST00000636782 80 ntBASIC3.29□□□□□ -1.88
VTI1AQ96AJ9 AC062016.1-201ENST00000355719 319 ntBASIC3.28□□□□□ -1.88
VTI1AQ96AJ9 MIR518F-201ENST00000384973 87 ntBASIC3.28□□□□□ -1.88
VTI1AQ96AJ9 AC063976.4-201ENST00000421971 163 ntBASIC3.28□□□□□ -1.88
VTI1AQ96AJ9 CST2P1-201ENST00000425770 87 ntBASIC3.28□□□□□ -1.88
VTI1AQ96AJ9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.28□□□□□ -1.88
VTI1AQ96AJ9 SNRPGP13-201ENST00000442212 177 ntBASIC3.28□□□□□ -1.88
VTI1AQ96AJ9 AC024995.1-201ENST00000523014 93 ntBASIC3.28□□□□□ -1.88
VTI1AQ96AJ9 AC079600.2-201ENST00000550076 130 ntBASIC3.28□□□□□ -1.88
VTI1AQ96AJ9 MIR3169-201ENST00000578032 83 ntBASIC3.28□□□□□ -1.88
VTI1AQ96AJ9 AC087685.1-201ENST00000587507 141 ntBASIC3.28□□□□□ -1.88
VTI1AQ96AJ9 AC022217.4-201ENST00000604389 163 ntBASIC3.28□□□□□ -1.88
VTI1AQ96AJ9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.28□□□□□ -1.88
VTI1AQ96AJ9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
VTI1AQ96AJ9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
VTI1AQ96AJ9 Y_RNA.35-201ENST00000362601 101 ntBASIC3.27□□□□□ -1.89
VTI1AQ96AJ9 AL606517.2-201ENST00000442855 241 ntBASIC3.27□□□□□ -1.89
VTI1AQ96AJ9 AL021397.1-201ENST00000451806 248 ntBASIC3.27□□□□□ -1.89
VTI1AQ96AJ9 RNU7-26P-201ENST00000458980 63 ntBASIC3.27□□□□□ -1.89
VTI1AQ96AJ9 RNU6-1149P-201ENST00000516810 97 ntBASIC3.27□□□□□ -1.89
VTI1AQ96AJ9 AC007536.1-201ENST00000533382 349 ntBASIC3.27□□□□□ -1.89
VTI1AQ96AJ9 AC007318.2-201ENST00000620999 243 ntBASIC3.27□□□□□ -1.89
VTI1AQ96AJ9 AC022513.1-201ENST00000624512 117 ntBASIC3.27□□□□□ -1.89
VTI1AQ96AJ9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
VTI1AQ96AJ9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VTI1AQ96AJ9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.26□□□□□ -1.89
VTI1AQ96AJ9 AC245060.5-201ENST00000610778 3293 ntBASIC3.26□□□□□ -1.89
VTI1AQ96AJ9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
VTI1AQ96AJ9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.26□□□□□ -1.89
VTI1AQ96AJ9 MIR515-2-201ENST00000384883 83 ntBASIC3.26□□□□□ -1.89
VTI1AQ96AJ9 MIR515-1-201ENST00000384884 83 ntBASIC3.26□□□□□ -1.89
VTI1AQ96AJ9 MIR548A3-201ENST00000385297 97 ntBASIC3.26□□□□□ -1.89
VTI1AQ96AJ9 MTATP6P21-201ENST00000440681 189 ntBASIC3.26□□□□□ -1.89
VTI1AQ96AJ9 SNORD109B-201ENST00000458961 67 ntBASIC3.26□□□□□ -1.89
VTI1AQ96AJ9 SNORD109A-201ENST00000459128 67 ntBASIC3.26□□□□□ -1.89
VTI1AQ96AJ9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.26□□□□□ -1.89
VTI1AQ96AJ9 SCARNA15-202ENST00000516881 127 ntBASIC3.26□□□□□ -1.89
VTI1AQ96AJ9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.26□□□□□ -1.89
VTI1AQ96AJ9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.26□□□□□ -1.89
VTI1AQ96AJ9 AC008264.2-201ENST00000610193 3731 ntBASIC3.26□□□□□ -1.89
VTI1AQ96AJ9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VTI1AQ96AJ9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.26□□□□□ -1.89
VTI1AQ96AJ9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.26□□□□□ -1.89
VTI1AQ96AJ9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.25□□□□□ -1.89
VTI1AQ96AJ9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.25□□□□□ -1.89
VTI1AQ96AJ9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
VTI1AQ96AJ9 AC073325.2-201ENST00000339545 159 ntBASIC3.25□□□□□ -1.89
VTI1AQ96AJ9 SNORD68-201ENST00000363214 84 ntBASIC3.25□□□□□ -1.89
VTI1AQ96AJ9 SNORD116-21-201ENST00000384507 92 ntBASIC3.25□□□□□ -1.89
VTI1AQ96AJ9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.25□□□□□ -1.89
VTI1AQ96AJ9 RNU7-94P-201ENST00000459576 63 ntBASIC3.25□□□□□ -1.89
VTI1AQ96AJ9 AC025166.1-201ENST00000612411 163 ntBASIC3.25□□□□□ -1.89
VTI1AQ96AJ9 AC022202.1-201ENST00000613515 211 ntBASIC3.25□□□□□ -1.89
VTI1AQ96AJ9 AL121890.5-201ENST00000620848 304 ntBASIC3.25□□□□□ -1.89
VTI1AQ96AJ9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
VTI1AQ96AJ9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
VTI1AQ96AJ9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
VTI1AQ96AJ9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VTI1AQ96AJ9 VTRNA1-1-201ENST00000363120 99 ntBASIC3.24□□□□□ -1.89
VTI1AQ96AJ9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.24□□□□□ -1.89
VTI1AQ96AJ9 Y_RNA.714-201ENST00000517065 90 ntBASIC3.24□□□□□ -1.89
VTI1AQ96AJ9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.24□□□□□ -1.89
VTI1AQ96AJ9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VTI1AQ96AJ9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.23□□□□□ -1.89
VTI1AQ96AJ9 SNORA9.2-201ENST00000365361 133 ntBASIC3.23□□□□□ -1.89
VTI1AQ96AJ9 MIR1261-201ENST00000408659 82 ntBASIC3.23□□□□□ -1.89
VTI1AQ96AJ9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.23□□□□□ -1.89
VTI1AQ96AJ9 MIR3613-201ENST00000579844 87 ntBASIC3.23□□□□□ -1.89
VTI1AQ96AJ9 MIR4762-201ENST00000585261 75 ntBASIC3.23□□□□□ -1.89
VTI1AQ96AJ9 CTSLP2-204ENST00000629029 392 ntBASIC3.23□□□□□ -1.89
VTI1AQ96AJ9 MTND5P18-201ENST00000445624 1801 ntBASIC3.23□□□□□ -1.89
VTI1AQ96AJ9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
VTI1AQ96AJ9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VTI1AQ96AJ9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.22□□□□□ -1.89
VTI1AQ96AJ9 RNU6-23P-201ENST00000363283 107 ntBASIC3.22□□□□□ -1.89
VTI1AQ96AJ9 MIR548A1-201ENST00000385041 97 ntBASIC3.22□□□□□ -1.89
VTI1AQ96AJ9 Y_RNA.649-201ENST00000459077 103 ntBASIC3.22□□□□□ -1.89
VTI1AQ96AJ9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.22□□□□□ -1.89
VTI1AQ96AJ9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VTI1AQ96AJ9 RNU6-1298P-201ENST00000362456 101 ntBASIC3.21□□□□□ -1.9
VTI1AQ96AJ9 SNORD115-3-201ENST00000363100 82 ntBASIC3.21□□□□□ -1.9
VTI1AQ96AJ9 Y_RNA.242-201ENST00000364473 110 ntBASIC3.21□□□□□ -1.9
VTI1AQ96AJ9 U8.5-201ENST00000364528 136 ntBASIC3.21□□□□□ -1.9
VTI1AQ96AJ9 Y_RNA.346-201ENST00000365385 112 ntBASIC3.21□□□□□ -1.9
VTI1AQ96AJ9 RNU6-147P-201ENST00000383983 107 ntBASIC3.21□□□□□ -1.9
VTI1AQ96AJ9 MIR1263-201ENST00000408324 86 ntBASIC3.21□□□□□ -1.9
VTI1AQ96AJ9 MIR548O-201ENST00000408583 114 ntBASIC3.21□□□□□ -1.9
VTI1AQ96AJ9 SNRPGP14-201ENST00000435400 219 ntBASIC3.21□□□□□ -1.9
VTI1AQ96AJ9 MIR5197-201ENST00000583721 112 ntBASIC3.21□□□□□ -1.9
VTI1AQ96AJ9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.21□□□□□ -1.9
VTI1AQ96AJ9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.2□□□□□ -1.9
VTI1AQ96AJ9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VTI1AQ96AJ9 AC096644.4-201ENST00000563417 2912 ntBASIC3.2□□□□□ -1.9
VTI1AQ96AJ9 RNA5SP109-201ENST00000391010 116 ntBASIC3.2□□□□□ -1.9
VTI1AQ96AJ9 SUMO1P4-201ENST00000429430 302 ntBASIC3.2□□□□□ -1.9
VTI1AQ96AJ9 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms