Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 Y_RNA.215-201ENST00000364204 112 ntBASIC2.48□□□□□ -2.01
ERCC4Q92889 Y_RNA.337-201ENST00000365312 102 ntBASIC2.48□□□□□ -2.01
ERCC4Q92889 BX510359.4-201ENST00000423750 193 ntBASIC2.48□□□□□ -2.01
ERCC4Q92889 RNU7-94P-201ENST00000459576 63 ntBASIC2.48□□□□□ -2.01
ERCC4Q92889 RNA5SP24-201ENST00000516478 95 ntBASIC2.48□□□□□ -2.01
ERCC4Q92889 AL031274.2-201ENST00000599419 203 ntBASIC2.48□□□□□ -2.01
ERCC4Q92889 AC097639.2-201ENST00000603159 172 ntBASIC2.48□□□□□ -2.01
ERCC4Q92889 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.48□□□□□ -2.01
ERCC4Q92889 AP006437.1-201ENST00000641440 3685 ntBASIC2.47□□□□□ -2.01
ERCC4Q92889 RNU6-151P-201ENST00000364158 107 ntBASIC2.47□□□□□ -2.01
ERCC4Q92889 Y_RNA.253-201ENST00000364562 112 ntBASIC2.47□□□□□ -2.01
ERCC4Q92889 RNU6-1138P-201ENST00000365359 106 ntBASIC2.47□□□□□ -2.01
ERCC4Q92889 RNU6-1080P-201ENST00000383982 107 ntBASIC2.47□□□□□ -2.01
ERCC4Q92889 SNORA8-201ENST00000384574 139 ntBASIC2.47□□□□□ -2.01
ERCC4Q92889 RNA5SP338-201ENST00000410495 85 ntBASIC2.47□□□□□ -2.01
ERCC4Q92889 AC006461.1-201ENST00000412637 326 ntBASIC2.47□□□□□ -2.01
ERCC4Q92889 RNU6-1291P-201ENST00000516591 104 ntBASIC2.47□□□□□ -2.01
ERCC4Q92889 RNU6-197P-201ENST00000516680 100 ntBASIC2.47□□□□□ -2.01
ERCC4Q92889 RNU7-193P-201ENST00000516723 65 ntBASIC2.47□□□□□ -2.01
ERCC4Q92889 AC104984.5-201ENST00000586878 94 ntBASIC2.47□□□□□ -2.01
ERCC4Q92889 AC002984.1-201ENST00000591692 448 ntBASIC2.47□□□□□ -2.01
ERCC4Q92889 AL049861.1-201ENST00000603130 150 ntBASIC2.47□□□□□ -2.01
ERCC4Q92889 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.47□□□□□ -2.01
ERCC4Q92889 AL590808.1-201ENST00000618696 141 ntBASIC2.47□□□□□ -2.01
ERCC4Q92889 MIR3658-201ENST00000636291 56 ntBASIC2.47□□□□□ -2.01
ERCC4Q92889 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ERCC4Q92889 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
ERCC4Q92889 MIR569-201ENST00000385228 96 ntBASIC2.46□□□□□ -2.02
ERCC4Q92889 RNU6-131P-201ENST00000391144 107 ntBASIC2.46□□□□□ -2.02
ERCC4Q92889 SNORD23.1-201ENST00000408212 104 ntBASIC2.46□□□□□ -2.02
ERCC4Q92889 Y_RNA.622-201ENST00000411091 108 ntBASIC2.46□□□□□ -2.02
ERCC4Q92889 RPS27P1-201ENST00000450552 247 ntBASIC2.46□□□□□ -2.02
ERCC4Q92889 NDUFA4P2-201ENST00000489989 244 ntBASIC2.46□□□□□ -2.02
ERCC4Q92889 HMGN1P7-201ENST00000491722 313 ntBASIC2.46□□□□□ -2.02
ERCC4Q92889 RNA5SP153-201ENST00000516498 76 ntBASIC2.46□□□□□ -2.02
ERCC4Q92889 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.46□□□□□ -2.02
ERCC4Q92889 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.46□□□□□ -2.02
ERCC4Q92889 AC022217.4-201ENST00000604389 163 ntBASIC2.46□□□□□ -2.02
ERCC4Q92889 U2.22-201ENST00000636441 106 ntBASIC2.46□□□□□ -2.02
ERCC4Q92889 AC132825.6-201ENST00000638861 357 ntBASIC2.46□□□□□ -2.02
ERCC4Q92889 AP000553.5-201ENST00000641933 54 ntBASIC2.46□□□□□ -2.02
ERCC4Q92889 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ERCC4Q92889 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ERCC4Q92889 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
ERCC4Q92889 RNA5SP160-201ENST00000364866 120 ntBASIC2.45□□□□□ -2.02
ERCC4Q92889 RNU6-81P-201ENST00000365608 104 ntBASIC2.45□□□□□ -2.02
ERCC4Q92889 Y_RNA.488-201ENST00000384403 102 ntBASIC2.45□□□□□ -2.02
ERCC4Q92889 Y_RNA.568-201ENST00000384742 113 ntBASIC2.45□□□□□ -2.02
ERCC4Q92889 RNA5SP323-201ENST00000391094 133 ntBASIC2.45□□□□□ -2.02
ERCC4Q92889 HMGN2P39-201ENST00000398005 273 ntBASIC2.45□□□□□ -2.02
ERCC4Q92889 RNU2-40P-201ENST00000410833 196 ntBASIC2.45□□□□□ -2.02
ERCC4Q92889 AC008413.1-201ENST00000511864 177 ntBASIC2.45□□□□□ -2.02
ERCC4Q92889 AP002004.2-201ENST00000531656 154 ntBASIC2.45□□□□□ -2.02
ERCC4Q92889 MIR3646-201ENST00000578301 84 ntBASIC2.45□□□□□ -2.02
ERCC4Q92889 MIR4448-201ENST00000584360 86 ntBASIC2.45□□□□□ -2.02
ERCC4Q92889 AC009831.4-201ENST00000620744 325 ntBASIC2.45□□□□□ -2.02
ERCC4Q92889 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ERCC4Q92889 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.44□□□□□ -2.02
ERCC4Q92889 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ERCC4Q92889 SNORA1B-201ENST00000362535 133 ntBASIC2.44□□□□□ -2.02
ERCC4Q92889 SNORD115-3-201ENST00000363100 82 ntBASIC2.44□□□□□ -2.02
ERCC4Q92889 RNU6-597P-201ENST00000365620 102 ntBASIC2.44□□□□□ -2.02
ERCC4Q92889 Y_RNA.393-201ENST00000383936 102 ntBASIC2.44□□□□□ -2.02
ERCC4Q92889 Y_RNA.432-201ENST00000384087 111 ntBASIC2.44□□□□□ -2.02
ERCC4Q92889 RNU6-768P-201ENST00000384683 107 ntBASIC2.44□□□□□ -2.02
ERCC4Q92889 RNU4-53P-201ENST00000410828 140 ntBASIC2.44□□□□□ -2.02
ERCC4Q92889 AL356379.1-201ENST00000414105 126 ntBASIC2.44□□□□□ -2.02
ERCC4Q92889 AL606517.2-201ENST00000442855 241 ntBASIC2.44□□□□□ -2.02
ERCC4Q92889 TRBV12-1-201ENST00000479785 344 ntBASIC2.44□□□□□ -2.02
ERCC4Q92889 SNORA31.25-201ENST00000517242 134 ntBASIC2.44□□□□□ -2.02
ERCC4Q92889 AC091544.4-201ENST00000555268 342 ntBASIC2.44□□□□□ -2.02
ERCC4Q92889 MIR548X2-201ENST00000579776 100 ntBASIC2.44□□□□□ -2.02
ERCC4Q92889 MIR3124-201ENST00000582636 67 ntBASIC2.44□□□□□ -2.02
ERCC4Q92889 ZNF702P-202ENST00000434269 1966 ntBASIC2.43□□□□□ -2.02
ERCC4Q92889 RNU6-978P-201ENST00000364371 103 ntBASIC2.43□□□□□ -2.02
ERCC4Q92889 Y_RNA.343-201ENST00000365354 112 ntBASIC2.43□□□□□ -2.02
ERCC4Q92889 SNORA19-201ENST00000384737 128 ntBASIC2.43□□□□□ -2.02
ERCC4Q92889 MIR518A2-201ENST00000384966 87 ntBASIC2.43□□□□□ -2.02
ERCC4Q92889 AC245047.4-201ENST00000433189 144 ntBASIC2.43□□□□□ -2.02
ERCC4Q92889 AC233266.1-201ENST00000454518 96 ntBASIC2.43□□□□□ -2.02
ERCC4Q92889 RNU7-197P-201ENST00000458836 62 ntBASIC2.43□□□□□ -2.02
ERCC4Q92889 RNU6-1299P-201ENST00000516316 100 ntBASIC2.43□□□□□ -2.02
ERCC4Q92889 RNU1-40P-201ENST00000516816 164 ntBASIC2.43□□□□□ -2.02
ERCC4Q92889 RNU1-97P-201ENST00000516872 164 ntBASIC2.43□□□□□ -2.02
ERCC4Q92889 MIR4529-201ENST00000578110 78 ntBASIC2.43□□□□□ -2.02
ERCC4Q92889 MIR378D2-201ENST00000580636 98 ntBASIC2.43□□□□□ -2.02
ERCC4Q92889 AP001485.1-201ENST00000604799 199 ntBASIC2.43□□□□□ -2.02
ERCC4Q92889 AC242852.1-201ENST00000612151 96 ntBASIC2.43□□□□□ -2.02
ERCC4Q92889 JPX_2.1-201ENST00000614161 69 ntBASIC2.43□□□□□ -2.02
ERCC4Q92889 AC244015.1-201ENST00000622301 99 ntBASIC2.43□□□□□ -2.02
ERCC4Q92889 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.43□□□□□ -2.02
ERCC4Q92889 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
ERCC4Q92889 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
ERCC4Q92889 RNU6-1019P-201ENST00000364424 107 ntBASIC2.42□□□□□ -2.02
ERCC4Q92889 Y_RNA.267-201ENST00000364679 109 ntBASIC2.42□□□□□ -2.02
ERCC4Q92889 RNU4-11P-201ENST00000365287 132 ntBASIC2.42□□□□□ -2.02
ERCC4Q92889 RNA5SP465-201ENST00000391195 109 ntBASIC2.42□□□□□ -2.02
ERCC4Q92889 SNORA11.4-201ENST00000408823 129 ntBASIC2.42□□□□□ -2.02
ERCC4Q92889 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.42□□□□□ -2.02
ERCC4Q92889 AC023449.1-201ENST00000454464 154 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms