Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MIR8063-201ENST00000621930 81 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 RNU6-1084P-201ENST00000362498 107 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 RNU6-450P-201ENST00000364654 107 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.424-201ENST00000384063 103 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 RNU6-1310P-201ENST00000384153 107 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.541-201ENST00000384640 113 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 MIR215-201ENST00000384858 110 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 RNU6-440P-201ENST00000390882 105 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 RNA5SP511-201ENST00000410487 115 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 MTCO3P19-201ENST00000415864 321 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 Z98949.2-201ENST00000440996 144 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 MRPS10P1-201ENST00000448483 130 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 RNA5SP481-201ENST00000516814 122 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 AL512310.8-201ENST00000550183 120 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 RPL21P9-201ENST00000556149 474 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 MIR3171-201ENST00000584270 74 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 AC120024.3-201ENST00000603167 156 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 AL390123.1-201ENST00000603216 237 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 AC005972.2-201ENST00000604690 348 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 RNU6-626P-201ENST00000363354 107 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 RNU6-271P-201ENST00000363858 105 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 RNU6-424P-201ENST00000384367 105 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 RNA5SP127-201ENST00000411051 133 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 AL354751.2-201ENST00000415471 210 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 MTND5P15-201ENST00000434246 349 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 AC093850.1-201ENST00000454121 251 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.639-201ENST00000458981 102 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 RPL39P28-201ENST00000465655 155 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 RPS26P55-201ENST00000471178 356 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 RNU6-408P-201ENST00000515910 100 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 RNU6-155P-201ENST00000516347 100 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 RN7SKP295-201ENST00000517264 153 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 POLR3GP1-201ENST00000594073 261 ntBASIC0.76□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.172-201ENST00000363765 102 ntBASIC0.75□□□□□ -2.29
SHROOM3Q8TF72 SNORD14.1-201ENST00000365609 90 ntBASIC0.75□□□□□ -2.29
SHROOM3Q8TF72 RNU6-1031P-201ENST00000384773 107 ntBASIC0.75□□□□□ -2.29
SHROOM3Q8TF72 RNA5SP482-201ENST00000391269 118 ntBASIC0.75□□□□□ -2.29
SHROOM3Q8TF72 RPL23AP54-201ENST00000495129 419 ntBASIC0.75□□□□□ -2.29
SHROOM3Q8TF72 RNU6-63P-201ENST00000516690 95 ntBASIC0.75□□□□□ -2.29
SHROOM3Q8TF72 AP001485.1-201ENST00000604799 199 ntBASIC0.75□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.44-201ENST00000362676 108 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 RNU5A-5P-201ENST00000411054 116 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 RNU6-1199P-201ENST00000411249 104 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 AL135790.2-201ENST00000437701 267 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 POLR2KP2-201ENST00000438155 177 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 AC117454.1-201ENST00000491120 168 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 RNU6-976P-201ENST00000516086 111 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 AP003484.1-201ENST00000530974 250 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 MIR4711-201ENST00000578274 70 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 AC113195.1-201ENST00000579952 141 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 AL513423.1-201ENST00000621695 132 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 RNU6-1123P-201ENST00000362347 106 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 RNU4-90P-201ENST00000362773 141 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 RNU6-199P-201ENST00000362954 107 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 RNU4-50P-201ENST00000364361 141 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 MIR660-201ENST00000385235 97 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 SNORA53-201ENST00000391141 249 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.592-201ENST00000410274 109 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 HSPE1P25-201ENST00000455484 251 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 RN7SKP88-201ENST00000516847 250 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 RNU6-341P-201ENST00000516973 96 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 AC011373.1-201ENST00000607270 237 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 GHRLOS.1-201ENST00000610995 70 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 7SK.8-201ENST00000612110 250 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 JPX_2.1-201ENST00000614161 69 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 7SK.11-201ENST00000615477 250 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 AL591926.4-201ENST00000616895 298 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 7SK.13-201ENST00000622040 250 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 SNORD3E-202ENST00000627253 216 ntBASIC0.74□□□□□ -2.29
SHROOM3Q8TF72 RNU6-797P-201ENST00000363101 109 ntBASIC0.73□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.280-201ENST00000364765 112 ntBASIC0.73□□□□□ -2.29
SHROOM3Q8TF72 RNU6-926P-201ENST00000384075 107 ntBASIC0.73□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.431-201ENST00000384086 102 ntBASIC0.73□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.509-201ENST00000384506 99 ntBASIC0.73□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.551-201ENST00000384661 102 ntBASIC0.73□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.602-201ENST00000410535 92 ntBASIC0.73□□□□□ -2.29
SHROOM3Q8TF72 RPS20P10-201ENST00000451209 253 ntBASIC0.73□□□□□ -2.29
SHROOM3Q8TF72 RNA5SP168-201ENST00000516642 112 ntBASIC0.73□□□□□ -2.29
SHROOM3Q8TF72 RNU6-922P-201ENST00000516753 99 ntBASIC0.73□□□□□ -2.29
SHROOM3Q8TF72 RNU6-1153P-201ENST00000516760 105 ntBASIC0.73□□□□□ -2.29
SHROOM3Q8TF72 RNU7-110P-201ENST00000516891 62 ntBASIC0.73□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.713-201ENST00000517013 96 ntBASIC0.73□□□□□ -2.29
SHROOM3Q8TF72 RNU6-570P-201ENST00000517051 105 ntBASIC0.73□□□□□ -2.29
SHROOM3Q8TF72 MIR3684-201ENST00000579779 74 ntBASIC0.73□□□□□ -2.29
SHROOM3Q8TF72 AC090574.1-201ENST00000623186 233 ntBASIC0.73□□□□□ -2.29
SHROOM3Q8TF72 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.73□□□□□ -2.29
SHROOM3Q8TF72 RNU6-801P-201ENST00000364087 105 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 VTRNA1-3-201ENST00000365645 89 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.456-201ENST00000384232 111 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 AL451046.2-201ENST00000403074 277 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms