Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 SNORA63D-201ENST00000364359 132 ntBASIC2.24□□□□□ -2.05
CCHCR1Q8TD31 MIR221-201ENST00000385135 110 ntBASIC2.24□□□□□ -2.05
CCHCR1Q8TD31 RNA5SP501-201ENST00000410990 112 ntBASIC2.24□□□□□ -2.05
CCHCR1Q8TD31 AC069257.2-201ENST00000441819 155 ntBASIC2.24□□□□□ -2.05
CCHCR1Q8TD31 RNA5SP233-201ENST00000459153 113 ntBASIC2.24□□□□□ -2.05
CCHCR1Q8TD31 HMGN1P7-201ENST00000491722 313 ntBASIC2.24□□□□□ -2.05
CCHCR1Q8TD31 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.24□□□□□ -2.05
CCHCR1Q8TD31 RPL23AP91-201ENST00000569211 455 ntBASIC2.24□□□□□ -2.05
CCHCR1Q8TD31 MIR4529-201ENST00000578110 78 ntBASIC2.24□□□□□ -2.05
CCHCR1Q8TD31 AP006437.1-201ENST00000641440 3685 ntBASIC2.24□□□□□ -2.05
CCHCR1Q8TD31 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.24□□□□□ -2.05
CCHCR1Q8TD31 AC245060.5-201ENST00000610778 3293 ntBASIC2.23□□□□□ -2.05
CCHCR1Q8TD31 Y_RNA.253-201ENST00000364562 112 ntBASIC2.23□□□□□ -2.05
CCHCR1Q8TD31 RNA5SP109-201ENST00000391010 116 ntBASIC2.23□□□□□ -2.05
CCHCR1Q8TD31 RNA5SP425-201ENST00000410336 112 ntBASIC2.23□□□□□ -2.05
CCHCR1Q8TD31 RNU6-1135P-201ENST00000411083 103 ntBASIC2.23□□□□□ -2.05
CCHCR1Q8TD31 AC245047.3-201ENST00000429428 127 ntBASIC2.23□□□□□ -2.05
CCHCR1Q8TD31 MIR4431-201ENST00000579990 94 ntBASIC2.23□□□□□ -2.05
CCHCR1Q8TD31 MIR3935-201ENST00000583472 104 ntBASIC2.23□□□□□ -2.05
CCHCR1Q8TD31 RNU4-43P-201ENST00000410628 137 ntBASIC2.22□□□□□ -2.05
CCHCR1Q8TD31 Y_RNA.621-201ENST00000411065 96 ntBASIC2.22□□□□□ -2.05
CCHCR1Q8TD31 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.22□□□□□ -2.05
CCHCR1Q8TD31 RNU6-561P-201ENST00000516222 102 ntBASIC2.22□□□□□ -2.05
CCHCR1Q8TD31 RNU2-19P-201ENST00000517288 84 ntBASIC2.22□□□□□ -2.05
CCHCR1Q8TD31 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.22□□□□□ -2.05
CCHCR1Q8TD31 U1.36-201ENST00000620684 176 ntBASIC2.22□□□□□ -2.05
CCHCR1Q8TD31 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.22□□□□□ -2.05
CCHCR1Q8TD31 RNU4-84P-201ENST00000364200 139 ntBASIC2.21□□□□□ -2.06
CCHCR1Q8TD31 RNU6-728P-201ENST00000365375 104 ntBASIC2.21□□□□□ -2.06
CCHCR1Q8TD31 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CCHCR1Q8TD31 RNU2-55P-201ENST00000411146 174 ntBASIC2.21□□□□□ -2.06
CCHCR1Q8TD31 Z98742.3-201ENST00000418637 326 ntBASIC2.21□□□□□ -2.06
CCHCR1Q8TD31 SEPT7P4-201ENST00000437076 306 ntBASIC2.21□□□□□ -2.06
CCHCR1Q8TD31 AL021397.1-201ENST00000451806 248 ntBASIC2.21□□□□□ -2.06
CCHCR1Q8TD31 AL049830.1-201ENST00000468034 425 ntBASIC2.21□□□□□ -2.06
CCHCR1Q8TD31 AC055731.1-201ENST00000474387 401 ntBASIC2.21□□□□□ -2.06
CCHCR1Q8TD31 SNORD77.4-201ENST00000516158 81 ntBASIC2.21□□□□□ -2.06
CCHCR1Q8TD31 SCARNA16.3-201ENST00000516595 184 ntBASIC2.21□□□□□ -2.06
CCHCR1Q8TD31 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.21□□□□□ -2.06
CCHCR1Q8TD31 MIR5002-201ENST00000584713 97 ntBASIC2.21□□□□□ -2.06
CCHCR1Q8TD31 AL049861.1-201ENST00000603130 150 ntBASIC2.21□□□□□ -2.06
CCHCR1Q8TD31 JPX_2.1-201ENST00000614161 69 ntBASIC2.21□□□□□ -2.06
CCHCR1Q8TD31 uc_338.4-201ENST00000616635 176 ntBASIC2.21□□□□□ -2.06
CCHCR1Q8TD31 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 RNU6-112P-201ENST00000363599 104 ntBASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 Y_RNA.272-201ENST00000364696 102 ntBASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 RNU6-296P-201ENST00000384608 107 ntBASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 Y_RNA.587-201ENST00000391210 103 ntBASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 AL603908.1-201ENST00000406098 201 ntBASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 SNRPGP10-201ENST00000432323 225 ntBASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 SUMO1P3-201ENST00000439961 304 ntBASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 SNRPGP8-201ENST00000454064 226 ntBASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 RNU2-56P-201ENST00000516826 190 ntBASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 RNU6-255P-201ENST00000516957 105 ntBASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 MIR4287-201ENST00000579398 78 ntBASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 AL591926.4-201ENST00000616895 298 ntBASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 MIR8054-201ENST00000620877 86 ntBASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
CCHCR1Q8TD31 MIR15B-201ENST00000385045 98 ntBASIC2.19□□□□□ -2.06
CCHCR1Q8TD31 RNU6-440P-201ENST00000390882 105 ntBASIC2.19□□□□□ -2.06
CCHCR1Q8TD31 Y_RNA.580-201ENST00000391004 95 ntBASIC2.19□□□□□ -2.06
CCHCR1Q8TD31 AL121914.1-201ENST00000450188 156 ntBASIC2.19□□□□□ -2.06
CCHCR1Q8TD31 AC023449.1-201ENST00000454464 154 ntBASIC2.19□□□□□ -2.06
CCHCR1Q8TD31 NDUFA4P2-201ENST00000489989 244 ntBASIC2.19□□□□□ -2.06
CCHCR1Q8TD31 SNORA31.10-201ENST00000516482 106 ntBASIC2.19□□□□□ -2.06
CCHCR1Q8TD31 RNU7-28P-201ENST00000516759 62 ntBASIC2.19□□□□□ -2.06
CCHCR1Q8TD31 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.19□□□□□ -2.06
CCHCR1Q8TD31 MIR1273D-201ENST00000577266 86 ntBASIC2.19□□□□□ -2.06
CCHCR1Q8TD31 MIR3144-201ENST00000579460 79 ntBASIC2.19□□□□□ -2.06
CCHCR1Q8TD31 MIR4762-201ENST00000585261 75 ntBASIC2.19□□□□□ -2.06
CCHCR1Q8TD31 AL365434.2-201ENST00000607979 234 ntBASIC2.19□□□□□ -2.06
CCHCR1Q8TD31 SNORD45.3-201ENST00000363836 72 ntBASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 U8.5-201ENST00000364528 136 ntBASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 RNU6-1138P-201ENST00000365359 106 ntBASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 RNU6-484P-201ENST00000384016 107 ntBASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 MIR520A-201ENST00000384862 85 ntBASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 MIR522-201ENST00000385071 87 ntBASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 RNA5SP482-201ENST00000391269 118 ntBASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 SNORA3.2-201ENST00000408221 125 ntBASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 RNA5SP100-201ENST00000410903 110 ntBASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 RNA5SP59-201ENST00000410922 110 ntBASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 RN7SKP192-201ENST00000411291 327 ntBASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 AC091544.4-201ENST00000555268 342 ntBASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 AL160236.1-201ENST00000556317 195 ntBASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 AC021753.1-201ENST00000635724 168 ntBASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCHCR1Q8TD31 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CCHCR1Q8TD31 MIR126-201ENST00000362291 85 ntBASIC2.17□□□□□ -2.06
CCHCR1Q8TD31 Y_RNA.357-201ENST00000365487 109 ntBASIC2.17□□□□□ -2.06
CCHCR1Q8TD31 RNU6-804P-201ENST00000384286 107 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 276.5 ms