Protein–RNA interactions for Protein: Q8NG27

PJA1, E3 ubiquitin-protein ligase Praja-1, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PJA1Q8NG27 Y_RNA.539-201ENST00000384635 107 ntBASIC1.97□□□□□ -2.09
PJA1Q8NG27 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PJA1Q8NG27 RPL30P13-201ENST00000418873 348 ntBASIC1.97□□□□□ -2.09
PJA1Q8NG27 HSPE1P25-201ENST00000455484 251 ntBASIC1.97□□□□□ -2.09
PJA1Q8NG27 AC005908.1-201ENST00000468701 347 ntBASIC1.97□□□□□ -2.09
PJA1Q8NG27 AC005840.1-201ENST00000498412 377 ntBASIC1.97□□□□□ -2.09
PJA1Q8NG27 SCARNA24.2-201ENST00000516968 130 ntBASIC1.97□□□□□ -2.09
PJA1Q8NG27 AC012493.3-201ENST00000604494 112 ntBASIC1.97□□□□□ -2.09
PJA1Q8NG27 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PJA1Q8NG27 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
PJA1Q8NG27 Y_RNA.136-201ENST00000363444 102 ntBASIC1.96□□□□□ -2.1
PJA1Q8NG27 Y_RNA.796-201ENST00000364268 102 ntBASIC1.96□□□□□ -2.1
PJA1Q8NG27 Y_RNA.799-201ENST00000364992 102 ntBASIC1.96□□□□□ -2.1
PJA1Q8NG27 RNU6-1323P-201ENST00000384025 107 ntBASIC1.96□□□□□ -2.1
PJA1Q8NG27 RNU6-514P-201ENST00000384208 107 ntBASIC1.96□□□□□ -2.1
PJA1Q8NG27 SNORA72-201ENST00000384339 132 ntBASIC1.96□□□□□ -2.1
PJA1Q8NG27 MIR194-1-201ENST00000384892 85 ntBASIC1.96□□□□□ -2.1
PJA1Q8NG27 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.96□□□□□ -2.1
PJA1Q8NG27 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.96□□□□□ -2.1
PJA1Q8NG27 AL161935.2-201ENST00000414627 60 ntBASIC1.96□□□□□ -2.1
PJA1Q8NG27 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.96□□□□□ -2.1
PJA1Q8NG27 AC003989.2-201ENST00000440224 169 ntBASIC1.96□□□□□ -2.1
PJA1Q8NG27 AC099513.1-201ENST00000490423 301 ntBASIC1.96□□□□□ -2.1
PJA1Q8NG27 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.96□□□□□ -2.1
PJA1Q8NG27 TRMT112P2-201ENST00000512910 132 ntBASIC1.96□□□□□ -2.1
PJA1Q8NG27 RNU6-111P-201ENST00000517179 105 ntBASIC1.96□□□□□ -2.1
PJA1Q8NG27 MIR4643-201ENST00000577473 78 ntBASIC1.96□□□□□ -2.1
PJA1Q8NG27 MIR4422-201ENST00000581938 83 ntBASIC1.96□□□□□ -2.1
PJA1Q8NG27 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.96□□□□□ -2.1
PJA1Q8NG27 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
PJA1Q8NG27 SNORD27-201ENST00000363981 72 ntBASIC1.95□□□□□ -2.1
PJA1Q8NG27 Y_RNA.257-201ENST00000364596 102 ntBASIC1.95□□□□□ -2.1
PJA1Q8NG27 SNORA25.9-201ENST00000365087 128 ntBASIC1.95□□□□□ -2.1
PJA1Q8NG27 MIR513A1-201ENST00000385138 129 ntBASIC1.95□□□□□ -2.1
PJA1Q8NG27 AL627390.1-201ENST00000396055 340 ntBASIC1.95□□□□□ -2.1
PJA1Q8NG27 RNU2-14P-201ENST00000411053 191 ntBASIC1.95□□□□□ -2.1
PJA1Q8NG27 AP1B1P2-201ENST00000416196 106 ntBASIC1.95□□□□□ -2.1
PJA1Q8NG27 RNA5SP445-201ENST00000515889 115 ntBASIC1.95□□□□□ -2.1
PJA1Q8NG27 RNU6-1338P-201ENST00000516328 91 ntBASIC1.95□□□□□ -2.1
PJA1Q8NG27 RNU2-31P-201ENST00000516954 155 ntBASIC1.95□□□□□ -2.1
PJA1Q8NG27 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.95□□□□□ -2.1
PJA1Q8NG27 MIR5089-201ENST00000580047 84 ntBASIC1.95□□□□□ -2.1
PJA1Q8NG27 AL512605.2-201ENST00000592972 256 ntBASIC1.95□□□□□ -2.1
PJA1Q8NG27 AC084768.2-201ENST00000622736 221 ntBASIC1.95□□□□□ -2.1
PJA1Q8NG27 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
PJA1Q8NG27 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.95□□□□□ -2.1
PJA1Q8NG27 SUMO2P12-201ENST00000405924 140 ntBASIC1.94□□□□□ -2.1
PJA1Q8NG27 AL603910.2-201ENST00000407268 136 ntBASIC1.94□□□□□ -2.1
PJA1Q8NG27 RNU4-62P-201ENST00000410125 130 ntBASIC1.94□□□□□ -2.1
PJA1Q8NG27 RPL39P38-201ENST00000467018 153 ntBASIC1.94□□□□□ -2.1
PJA1Q8NG27 RNU6-1023P-201ENST00000516137 106 ntBASIC1.94□□□□□ -2.1
PJA1Q8NG27 AC136628.3-201ENST00000521868 290 ntBASIC1.94□□□□□ -2.1
PJA1Q8NG27 POLR3GP1-201ENST00000594073 261 ntBASIC1.94□□□□□ -2.1
PJA1Q8NG27 SNRPGP19-201ENST00000603826 189 ntBASIC1.94□□□□□ -2.1
PJA1Q8NG27 SNORD3E-202ENST00000627253 216 ntBASIC1.94□□□□□ -2.1
PJA1Q8NG27 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PJA1Q8NG27 AL391987.6-201ENST00000305671 199 ntBASIC1.93□□□□□ -2.1
PJA1Q8NG27 SNORA25.1-201ENST00000362326 128 ntBASIC1.93□□□□□ -2.1
PJA1Q8NG27 Y_RNA.277-201ENST00000364754 102 ntBASIC1.93□□□□□ -2.1
PJA1Q8NG27 RNA5SP259-201ENST00000365541 109 ntBASIC1.93□□□□□ -2.1
PJA1Q8NG27 RNU6-338P-201ENST00000383888 105 ntBASIC1.93□□□□□ -2.1
PJA1Q8NG27 RNU6-1080P-201ENST00000383982 107 ntBASIC1.93□□□□□ -2.1
PJA1Q8NG27 RNU1-78P-201ENST00000391248 165 ntBASIC1.93□□□□□ -2.1
PJA1Q8NG27 RNU6-651P-201ENST00000411040 105 ntBASIC1.93□□□□□ -2.1
PJA1Q8NG27 AC245517.4-201ENST00000448601 281 ntBASIC1.93□□□□□ -2.1
PJA1Q8NG27 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.93□□□□□ -2.1
PJA1Q8NG27 OR9P1P-201ENST00000496431 281 ntBASIC1.93□□□□□ -2.1
PJA1Q8NG27 AC079140.2-201ENST00000506193 142 ntBASIC1.93□□□□□ -2.1
PJA1Q8NG27 RNU6-191P-201ENST00000516295 94 ntBASIC1.93□□□□□ -2.1
PJA1Q8NG27 AL442067.1-201ENST00000613261 223 ntBASIC1.93□□□□□ -2.1
PJA1Q8NG27 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.93□□□□□ -2.1
PJA1Q8NG27 U6.104-201ENST00000637979 90 ntBASIC1.93□□□□□ -2.1
PJA1Q8NG27 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
PJA1Q8NG27 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
PJA1Q8NG27 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
PJA1Q8NG27 RNU6-326P-201ENST00000365480 107 ntBASIC1.92□□□□□ -2.1
PJA1Q8NG27 Y_RNA.418-201ENST00000384029 102 ntBASIC1.92□□□□□ -2.1
PJA1Q8NG27 Y_RNA.489-201ENST00000384410 101 ntBASIC1.92□□□□□ -2.1
PJA1Q8NG27 RNA5SP168-201ENST00000516642 112 ntBASIC1.92□□□□□ -2.1
PJA1Q8NG27 AC015688.6-201ENST00000577737 104 ntBASIC1.92□□□□□ -2.1
PJA1Q8NG27 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PJA1Q8NG27 Y_RNA.54-201ENST00000362766 105 ntBASIC1.91□□□□□ -2.1
PJA1Q8NG27 RNU4-41P-201ENST00000364426 143 ntBASIC1.91□□□□□ -2.1
PJA1Q8NG27 SNORA20.1-201ENST00000364790 130 ntBASIC1.91□□□□□ -2.1
PJA1Q8NG27 SNORD1A-201ENST00000364968 72 ntBASIC1.91□□□□□ -2.1
PJA1Q8NG27 Y_RNA.416-201ENST00000384014 113 ntBASIC1.91□□□□□ -2.1
PJA1Q8NG27 MIR9-3-201ENST00000385084 90 ntBASIC1.91□□□□□ -2.1
PJA1Q8NG27 MIR660-201ENST00000385235 97 ntBASIC1.91□□□□□ -2.1
PJA1Q8NG27 RPL31P63-201ENST00000422565 375 ntBASIC1.91□□□□□ -2.1
PJA1Q8NG27 RNU6-250P-201ENST00000516958 103 ntBASIC1.91□□□□□ -2.1
PJA1Q8NG27 Y_RNA.714-201ENST00000517065 90 ntBASIC1.91□□□□□ -2.1
PJA1Q8NG27 SUMO2P16-201ENST00000519475 264 ntBASIC1.91□□□□□ -2.1
PJA1Q8NG27 AP003357.1-201ENST00000604497 148 ntBASIC1.91□□□□□ -2.1
PJA1Q8NG27 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.91□□□□□ -2.1
PJA1Q8NG27 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.91□□□□□ -2.1
PJA1Q8NG27 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.1
PJA1Q8NG27 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
PJA1Q8NG27 Y_RNA.20-201ENST00000362479 113 ntBASIC1.9□□□□□ -2.11
PJA1Q8NG27 Y_RNA.65-201ENST00000362846 100 ntBASIC1.9□□□□□ -2.11
PJA1Q8NG27 SNORD68-201ENST00000363214 84 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms