Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CST2P1-201ENST00000425770 87 ntBASIC2.62□□□□□ -1.99
NUP43Q8NFH3 CALM2P4-201ENST00000430810 426 ntBASIC2.62□□□□□ -1.99
NUP43Q8NFH3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.62□□□□□ -1.99
NUP43Q8NFH3 AC003982.1-202ENST00000469928 248 ntBASIC2.62□□□□□ -1.99
NUP43Q8NFH3 SNORA9.3-201ENST00000516383 129 ntBASIC2.62□□□□□ -1.99
NUP43Q8NFH3 Y_RNA.714-201ENST00000517065 90 ntBASIC2.62□□□□□ -1.99
NUP43Q8NFH3 MIR4679-2-201ENST00000578358 77 ntBASIC2.62□□□□□ -1.99
NUP43Q8NFH3 MIR3945-201ENST00000581853 98 ntBASIC2.62□□□□□ -1.99
NUP43Q8NFH3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.62□□□□□ -1.99
NUP43Q8NFH3 AL033523.1-201ENST00000605153 153 ntBASIC2.62□□□□□ -1.99
NUP43Q8NFH3 MIR6715A-201ENST00000615929 79 ntBASIC2.62□□□□□ -1.99
NUP43Q8NFH3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.62□□□□□ -1.99
NUP43Q8NFH3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NUP43Q8NFH3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NUP43Q8NFH3 MIR26A1-201ENST00000362205 77 ntBASIC2.61□□□□□ -1.99
NUP43Q8NFH3 Y_RNA.43-201ENST00000362670 111 ntBASIC2.61□□□□□ -1.99
NUP43Q8NFH3 RNU6-862P-201ENST00000362804 105 ntBASIC2.61□□□□□ -1.99
NUP43Q8NFH3 AL139132.1-201ENST00000431587 344 ntBASIC2.61□□□□□ -1.99
NUP43Q8NFH3 AC099677.2-201ENST00000436385 175 ntBASIC2.61□□□□□ -1.99
NUP43Q8NFH3 AC009238.1-201ENST00000442165 424 ntBASIC2.61□□□□□ -1.99
NUP43Q8NFH3 AC009237.6-201ENST00000446969 424 ntBASIC2.61□□□□□ -1.99
NUP43Q8NFH3 RNU7-94P-201ENST00000459576 63 ntBASIC2.61□□□□□ -1.99
NUP43Q8NFH3 TRBV12-1-201ENST00000479785 344 ntBASIC2.61□□□□□ -1.99
NUP43Q8NFH3 RNU6-113P-201ENST00000516653 101 ntBASIC2.61□□□□□ -1.99
NUP43Q8NFH3 AC007536.1-201ENST00000533382 349 ntBASIC2.61□□□□□ -1.99
NUP43Q8NFH3 MIR3605-201ENST00000583214 100 ntBASIC2.61□□□□□ -1.99
NUP43Q8NFH3 MIR5197-201ENST00000583721 112 ntBASIC2.61□□□□□ -1.99
NUP43Q8NFH3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.61□□□□□ -1.99
NUP43Q8NFH3 MIR4762-201ENST00000585261 75 ntBASIC2.61□□□□□ -1.99
NUP43Q8NFH3 AC022217.4-201ENST00000604389 163 ntBASIC2.61□□□□□ -1.99
NUP43Q8NFH3 U4atac.1-201ENST00000618345 95 ntBASIC2.61□□□□□ -1.99
NUP43Q8NFH3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NUP43Q8NFH3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.61□□□□□ -1.99
NUP43Q8NFH3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
NUP43Q8NFH3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NUP43Q8NFH3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
NUP43Q8NFH3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.6□□□□□ -1.99
NUP43Q8NFH3 U8.5-201ENST00000364528 136 ntBASIC2.6□□□□□ -1.99
NUP43Q8NFH3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
NUP43Q8NFH3 MIR1263-201ENST00000408324 86 ntBASIC2.6□□□□□ -1.99
NUP43Q8NFH3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.6□□□□□ -1.99
NUP43Q8NFH3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.6□□□□□ -1.99
NUP43Q8NFH3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.6□□□□□ -1.99
NUP43Q8NFH3 RNA5SP170-201ENST00000517150 101 ntBASIC2.6□□□□□ -1.99
NUP43Q8NFH3 MIR3169-201ENST00000578032 83 ntBASIC2.6□□□□□ -1.99
NUP43Q8NFH3 AC008555.8-201ENST00000623602 2168 ntBASIC2.59□□□□□ -1.99
NUP43Q8NFH3 RNA5SP432-201ENST00000362480 116 ntBASIC2.59□□□□□ -1.99
NUP43Q8NFH3 RNA5SP493-201ENST00000364115 91 ntBASIC2.59□□□□□ -1.99
NUP43Q8NFH3 MIR887-201ENST00000401258 79 ntBASIC2.59□□□□□ -1.99
NUP43Q8NFH3 AL590004.2-201ENST00000404787 371 ntBASIC2.59□□□□□ -1.99
NUP43Q8NFH3 SNRPGP14-201ENST00000435400 219 ntBASIC2.59□□□□□ -1.99
NUP43Q8NFH3 AL445687.1-201ENST00000439946 251 ntBASIC2.59□□□□□ -1.99
NUP43Q8NFH3 AL606517.2-201ENST00000442855 241 ntBASIC2.59□□□□□ -1.99
NUP43Q8NFH3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.59□□□□□ -1.99
NUP43Q8NFH3 MIR3162-201ENST00000581818 82 ntBASIC2.59□□□□□ -1.99
NUP43Q8NFH3 MIR4506-201ENST00000584693 77 ntBASIC2.59□□□□□ -1.99
NUP43Q8NFH3 AC006441.5-201ENST00000612680 209 ntBASIC2.59□□□□□ -1.99
NUP43Q8NFH3 AC022513.1-201ENST00000624512 117 ntBASIC2.59□□□□□ -1.99
NUP43Q8NFH3 CTSLP2-204ENST00000629029 392 ntBASIC2.59□□□□□ -1.99
NUP43Q8NFH3 AL137790.1-201ENST00000634283 177 ntBASIC2.59□□□□□ -1.99
NUP43Q8NFH3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
NUP43Q8NFH3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.58□□□□□ -2
NUP43Q8NFH3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.58□□□□□ -2
NUP43Q8NFH3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.58□□□□□ -2
NUP43Q8NFH3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.58□□□□□ -2
NUP43Q8NFH3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.58□□□□□ -2
NUP43Q8NFH3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.58□□□□□ -2
NUP43Q8NFH3 SNORD68-201ENST00000363214 84 ntBASIC2.58□□□□□ -2
NUP43Q8NFH3 Y_RNA.366-201ENST00000365540 102 ntBASIC2.58□□□□□ -2
NUP43Q8NFH3 Y_RNA.528-201ENST00000384575 108 ntBASIC2.58□□□□□ -2
NUP43Q8NFH3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.58□□□□□ -2
NUP43Q8NFH3 MIR548O-201ENST00000408583 114 ntBASIC2.58□□□□□ -2
NUP43Q8NFH3 RNA5SP89-201ENST00000410300 108 ntBASIC2.58□□□□□ -2
NUP43Q8NFH3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.58□□□□□ -2
NUP43Q8NFH3 AC092427.1-202ENST00000430569 476 ntBASIC2.58□□□□□ -2
NUP43Q8NFH3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.58□□□□□ -2
NUP43Q8NFH3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.58□□□□□ -2
NUP43Q8NFH3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
NUP43Q8NFH3 AC007064.1-201ENST00000412238 351 ntBASIC2.57□□□□□ -2
NUP43Q8NFH3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.57□□□□□ -2
NUP43Q8NFH3 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.57□□□□□ -2
NUP43Q8NFH3 RNU6-168P-201ENST00000516189 101 ntBASIC2.57□□□□□ -2
NUP43Q8NFH3 RNU7-25P-201ENST00000516544 62 ntBASIC2.57□□□□□ -2
NUP43Q8NFH3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.57□□□□□ -2
NUP43Q8NFH3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.57□□□□□ -2
NUP43Q8NFH3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.57□□□□□ -2
NUP43Q8NFH3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NUP43Q8NFH3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
NUP43Q8NFH3 MIR449A-201ENST00000362113 91 ntBASIC2.56□□□□□ -2
NUP43Q8NFH3 RNU6-268P-201ENST00000364174 107 ntBASIC2.56□□□□□ -2
NUP43Q8NFH3 RNU6-442P-201ENST00000383968 104 ntBASIC2.56□□□□□ -2
NUP43Q8NFH3 RNA5SP492-201ENST00000411330 114 ntBASIC2.56□□□□□ -2
NUP43Q8NFH3 AC087499.2-201ENST00000432861 149 ntBASIC2.56□□□□□ -2
NUP43Q8NFH3 RN7SL297P-201ENST00000483161 293 ntBASIC2.56□□□□□ -2
NUP43Q8NFH3 RNA5SP385-201ENST00000515947 110 ntBASIC2.56□□□□□ -2
NUP43Q8NFH3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.56□□□□□ -2
NUP43Q8NFH3 AL137067.1-201ENST00000615933 120 ntBASIC2.56□□□□□ -2
NUP43Q8NFH3 AC134878.1-201ENST00000619901 243 ntBASIC2.56□□□□□ -2
NUP43Q8NFH3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NUP43Q8NFH3 AL355596.1-201ENST00000565399 3996 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms