Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 RNU6-131P-201ENST00000391144 107 ntBASIC1.34□□□□□ -2.19
TTC39CQ8N584 MLLT10P1-201ENST00000418346 262 ntBASIC1.34□□□□□ -2.19
TTC39CQ8N584 AC136628.3-201ENST00000521868 290 ntBASIC1.34□□□□□ -2.19
TTC39CQ8N584 AC019288.1-201ENST00000557918 224 ntBASIC1.34□□□□□ -2.19
TTC39CQ8N584 AC127455.1-201ENST00000565496 145 ntBASIC1.34□□□□□ -2.19
TTC39CQ8N584 FAM106DP-201ENST00000586416 501 ntBASIC1.34□□□□□ -2.19
TTC39CQ8N584 RAC1P9-201ENST00000604990 392 ntBASIC1.34□□□□□ -2.19
TTC39CQ8N584 snoU13.31-201ENST00000607291 104 ntBASIC1.34□□□□□ -2.19
TTC39CQ8N584 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
TTC39CQ8N584 RNU6-1084P-201ENST00000362498 107 ntBASIC1.33□□□□□ -2.2
TTC39CQ8N584 RNU4-90P-201ENST00000362773 141 ntBASIC1.33□□□□□ -2.2
TTC39CQ8N584 SNORA25.8-201ENST00000364831 128 ntBASIC1.33□□□□□ -2.2
TTC39CQ8N584 U8.7-201ENST00000364940 136 ntBASIC1.33□□□□□ -2.2
TTC39CQ8N584 MIR526A1-201ENST00000384897 85 ntBASIC1.33□□□□□ -2.2
TTC39CQ8N584 RNU6-1054P-201ENST00000411293 104 ntBASIC1.33□□□□□ -2.2
TTC39CQ8N584 SNRPGP10-201ENST00000432323 225 ntBASIC1.33□□□□□ -2.2
TTC39CQ8N584 AC015922.2-201ENST00000435593 184 ntBASIC1.33□□□□□ -2.2
TTC39CQ8N584 AL603825.1-201ENST00000438481 80 ntBASIC1.33□□□□□ -2.2
TTC39CQ8N584 RPL39P39-201ENST00000455840 151 ntBASIC1.33□□□□□ -2.2
TTC39CQ8N584 RPL23AP54-201ENST00000495129 419 ntBASIC1.33□□□□□ -2.2
TTC39CQ8N584 AC068338.1-201ENST00000565567 176 ntBASIC1.33□□□□□ -2.2
TTC39CQ8N584 MIR548AY-201ENST00000617669 107 ntBASIC1.33□□□□□ -2.2
TTC39CQ8N584 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.33□□□□□ -2.2
TTC39CQ8N584 RNU4-80P-201ENST00000363200 141 ntBASIC1.32□□□□□ -2.2
TTC39CQ8N584 Y_RNA.136-201ENST00000363444 102 ntBASIC1.32□□□□□ -2.2
TTC39CQ8N584 Y_RNA.203-201ENST00000364106 102 ntBASIC1.32□□□□□ -2.2
TTC39CQ8N584 snoU2-30.1-201ENST00000365012 70 ntBASIC1.32□□□□□ -2.2
TTC39CQ8N584 Y_RNA.336-201ENST00000365307 109 ntBASIC1.32□□□□□ -2.2
TTC39CQ8N584 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.32□□□□□ -2.2
TTC39CQ8N584 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.32□□□□□ -2.2
TTC39CQ8N584 MIR1298-201ENST00000408783 112 ntBASIC1.32□□□□□ -2.2
TTC39CQ8N584 HMGN2P32-201ENST00000444648 269 ntBASIC1.32□□□□□ -2.2
TTC39CQ8N584 LINC01399-202ENST00000458450 244 ntBASIC1.32□□□□□ -2.2
TTC39CQ8N584 Y_RNA.638-201ENST00000459374 113 ntBASIC1.32□□□□□ -2.2
TTC39CQ8N584 AC117454.1-201ENST00000491120 168 ntBASIC1.32□□□□□ -2.2
TTC39CQ8N584 SNORA31.4-201ENST00000516049 129 ntBASIC1.32□□□□□ -2.2
TTC39CQ8N584 RNU6-496P-201ENST00000516145 99 ntBASIC1.32□□□□□ -2.2
TTC39CQ8N584 SNORD45.4-201ENST00000516629 73 ntBASIC1.32□□□□□ -2.2
TTC39CQ8N584 MIR3171-201ENST00000584270 74 ntBASIC1.32□□□□□ -2.2
TTC39CQ8N584 AL157834.3-201ENST00000615543 103 ntBASIC1.32□□□□□ -2.2
TTC39CQ8N584 AC007742.2-201ENST00000618226 398 ntBASIC1.32□□□□□ -2.2
TTC39CQ8N584 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.32□□□□□ -2.2
TTC39CQ8N584 AL391987.6-201ENST00000305671 199 ntBASIC1.31□□□□□ -2.2
TTC39CQ8N584 Y_RNA.202-201ENST00000364083 110 ntBASIC1.31□□□□□ -2.2
TTC39CQ8N584 Y_RNA.338-201ENST00000365320 114 ntBASIC1.31□□□□□ -2.2
TTC39CQ8N584 Y_RNA.455-201ENST00000384230 98 ntBASIC1.31□□□□□ -2.2
TTC39CQ8N584 MIR618-201ENST00000385287 98 ntBASIC1.31□□□□□ -2.2
TTC39CQ8N584 Y_RNA.602-201ENST00000410535 92 ntBASIC1.31□□□□□ -2.2
TTC39CQ8N584 RNU6-191P-201ENST00000516295 94 ntBASIC1.31□□□□□ -2.2
TTC39CQ8N584 SNORA40.15-201ENST00000516884 107 ntBASIC1.31□□□□□ -2.2
TTC39CQ8N584 AC020661.2-201ENST00000560114 134 ntBASIC1.31□□□□□ -2.2
TTC39CQ8N584 AC087685.1-201ENST00000587507 141 ntBASIC1.31□□□□□ -2.2
TTC39CQ8N584 AL355297.3-201ENST00000604082 446 ntBASIC1.31□□□□□ -2.2
TTC39CQ8N584 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.31□□□□□ -2.2
TTC39CQ8N584 Y_RNA.276-201ENST00000364732 109 ntBASIC1.3□□□□□ -2.2
TTC39CQ8N584 SNORA72.4-201ENST00000384174 132 ntBASIC1.3□□□□□ -2.2
TTC39CQ8N584 MIR15B-201ENST00000385045 98 ntBASIC1.3□□□□□ -2.2
TTC39CQ8N584 Y_RNA.581-201ENST00000391017 97 ntBASIC1.3□□□□□ -2.2
TTC39CQ8N584 HSPE1P25-201ENST00000455484 251 ntBASIC1.3□□□□□ -2.2
TTC39CQ8N584 RNU6-947P-201ENST00000516264 106 ntBASIC1.3□□□□□ -2.2
TTC39CQ8N584 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.3□□□□□ -2.2
TTC39CQ8N584 MIR2681-201ENST00000581814 105 ntBASIC1.3□□□□□ -2.2
TTC39CQ8N584 JPX_2.1-201ENST00000614161 69 ntBASIC1.3□□□□□ -2.2
TTC39CQ8N584 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
TTC39CQ8N584 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.3□□□□□ -2.2
TTC39CQ8N584 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
TTC39CQ8N584 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
TTC39CQ8N584 Y_RNA.152-201ENST00000363578 100 ntBASIC1.29□□□□□ -2.2
TTC39CQ8N584 RNU6-969P-201ENST00000383900 105 ntBASIC1.29□□□□□ -2.2
TTC39CQ8N584 Y_RNA.418-201ENST00000384029 102 ntBASIC1.29□□□□□ -2.2
TTC39CQ8N584 SNORA25-201ENST00000384384 134 ntBASIC1.29□□□□□ -2.2
TTC39CQ8N584 Y_RNA.569-201ENST00000384749 103 ntBASIC1.29□□□□□ -2.2
TTC39CQ8N584 MTND4LP30-201ENST00000454092 297 ntBASIC1.29□□□□□ -2.2
TTC39CQ8N584 RNU7-141P-201ENST00000459304 62 ntBASIC1.29□□□□□ -2.2
TTC39CQ8N584 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.29□□□□□ -2.2
TTC39CQ8N584 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.29□□□□□ -2.2
TTC39CQ8N584 SNORA31.2-201ENST00000516019 134 ntBASIC1.29□□□□□ -2.2
TTC39CQ8N584 SNORA70.22-201ENST00000517160 124 ntBASIC1.29□□□□□ -2.2
TTC39CQ8N584 MIR4498-201ENST00000577599 66 ntBASIC1.29□□□□□ -2.2
TTC39CQ8N584 AL022345.2-201ENST00000606307 135 ntBASIC1.29□□□□□ -2.2
TTC39CQ8N584 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.29□□□□□ -2.2
TTC39CQ8N584 MIR6078-201ENST00000611069 100 ntBASIC1.29□□□□□ -2.2
TTC39CQ8N584 Y_RNA.11-201ENST00000362375 109 ntBASIC1.28□□□□□ -2.2
TTC39CQ8N584 RNU6-674P-201ENST00000363831 107 ntBASIC1.28□□□□□ -2.2
TTC39CQ8N584 RNU6-770P-201ENST00000363929 105 ntBASIC1.28□□□□□ -2.2
TTC39CQ8N584 RNU6-801P-201ENST00000364087 105 ntBASIC1.28□□□□□ -2.2
TTC39CQ8N584 SNORD50B-201ENST00000364995 70 ntBASIC1.28□□□□□ -2.2
TTC39CQ8N584 RNU6-102P-201ENST00000384485 104 ntBASIC1.28□□□□□ -2.2
TTC39CQ8N584 MIR136-201ENST00000385207 82 ntBASIC1.28□□□□□ -2.2
TTC39CQ8N584 AC245047.7-201ENST00000440265 293 ntBASIC1.28□□□□□ -2.2
TTC39CQ8N584 RNU6-437P-201ENST00000459408 95 ntBASIC1.28□□□□□ -2.2
TTC39CQ8N584 AC048334.1-201ENST00000477975 159 ntBASIC1.28□□□□□ -2.2
TTC39CQ8N584 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.28□□□□□ -2.2
TTC39CQ8N584 AC113195.1-201ENST00000579952 141 ntBASIC1.28□□□□□ -2.2
TTC39CQ8N584 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.28□□□□□ -2.2
TTC39CQ8N584 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
TTC39CQ8N584 SNORA36B-201ENST00000410438 131 ntBASIC1.27□□□□□ -2.21
TTC39CQ8N584 RNU6-1143P-201ENST00000516125 104 ntBASIC1.27□□□□□ -2.21
TTC39CQ8N584 RN7SKP179-201ENST00000516126 217 ntBASIC1.27□□□□□ -2.21
TTC39CQ8N584 Y_RNA.701-201ENST00000516812 110 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms