Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RNA5SP385-201ENST00000515947 110 ntBASIC3.14□□□□□ -1.91
DEPDC4Q8N2C3 MIR3683-201ENST00000580847 82 ntBASIC3.14□□□□□ -1.91
DEPDC4Q8N2C3 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.14□□□□□ -1.91
DEPDC4Q8N2C3 AP006437.1-201ENST00000641440 3685 ntBASIC3.14□□□□□ -1.91
DEPDC4Q8N2C3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
DEPDC4Q8N2C3 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.13□□□□□ -1.91
DEPDC4Q8N2C3 SNORD56.5-201ENST00000364281 72 ntBASIC3.13□□□□□ -1.91
DEPDC4Q8N2C3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.13□□□□□ -1.91
DEPDC4Q8N2C3 RNY4P20-201ENST00000516678 93 ntBASIC3.13□□□□□ -1.91
DEPDC4Q8N2C3 RNU6-56P-201ENST00000516986 93 ntBASIC3.13□□□□□ -1.91
DEPDC4Q8N2C3 AC245166.1-201ENST00000521012 253 ntBASIC3.13□□□□□ -1.91
DEPDC4Q8N2C3 AC006023.1-201ENST00000603944 259 ntBASIC3.13□□□□□ -1.91
DEPDC4Q8N2C3 AC021443.1-201ENST00000604478 211 ntBASIC3.13□□□□□ -1.91
DEPDC4Q8N2C3 uc_338.28-201ENST00000612082 187 ntBASIC3.13□□□□□ -1.91
DEPDC4Q8N2C3 SCARNA15.3-201ENST00000626315 122 ntBASIC3.13□□□□□ -1.91
DEPDC4Q8N2C3 SCARNA4.1-201ENST00000628597 123 ntBASIC3.13□□□□□ -1.91
DEPDC4Q8N2C3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.12□□□□□ -1.91
DEPDC4Q8N2C3 Y_RNA.49-201ENST00000362714 112 ntBASIC3.12□□□□□ -1.91
DEPDC4Q8N2C3 Y_RNA.298-201ENST00000364960 107 ntBASIC3.12□□□□□ -1.91
DEPDC4Q8N2C3 RNU6-424P-201ENST00000384367 105 ntBASIC3.12□□□□□ -1.91
DEPDC4Q8N2C3 Y_RNA.495-201ENST00000384435 112 ntBASIC3.12□□□□□ -1.91
DEPDC4Q8N2C3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.12□□□□□ -1.91
DEPDC4Q8N2C3 RPL32P35-201ENST00000415214 394 ntBASIC3.12□□□□□ -1.91
DEPDC4Q8N2C3 RN7SL504P-201ENST00000494496 287 ntBASIC3.12□□□□□ -1.91
DEPDC4Q8N2C3 RNA5SP217-201ENST00000515959 91 ntBASIC3.12□□□□□ -1.91
DEPDC4Q8N2C3 AC091932.4-201ENST00000623386 200 ntBASIC3.12□□□□□ -1.91
DEPDC4Q8N2C3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
DEPDC4Q8N2C3 AC007336.1-201ENST00000576365 3828 ntBASIC3.12□□□□□ -1.91
DEPDC4Q8N2C3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
DEPDC4Q8N2C3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
DEPDC4Q8N2C3 SNORD9-201ENST00000362566 104 ntBASIC3.11□□□□□ -1.91
DEPDC4Q8N2C3 MIR518A2-201ENST00000384966 87 ntBASIC3.11□□□□□ -1.91
DEPDC4Q8N2C3 CYCSP4-201ENST00000429682 331 ntBASIC3.11□□□□□ -1.91
DEPDC4Q8N2C3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.11□□□□□ -1.91
DEPDC4Q8N2C3 RPS29P24-201ENST00000486345 171 ntBASIC3.11□□□□□ -1.91
DEPDC4Q8N2C3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.11□□□□□ -1.91
DEPDC4Q8N2C3 MIR4513-201ENST00000581077 86 ntBASIC3.11□□□□□ -1.91
DEPDC4Q8N2C3 MIR3922-201ENST00000585192 84 ntBASIC3.11□□□□□ -1.91
DEPDC4Q8N2C3 RNU6-94P-201ENST00000607728 107 ntBASIC3.11□□□□□ -1.91
DEPDC4Q8N2C3 MIR3651-201ENST00000630427 90 ntBASIC3.11□□□□□ -1.91
DEPDC4Q8N2C3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DEPDC4Q8N2C3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DEPDC4Q8N2C3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DEPDC4Q8N2C3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-34-201ENST00000362441 82 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-12-201ENST00000362583 82 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-29-201ENST00000362834 82 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-9-201ENST00000362912 82 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-21-201ENST00000362963 81 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-14-201ENST00000363090 81 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-13-201ENST00000363358 82 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 RNU6-1255P-201ENST00000363434 112 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-41-201ENST00000363608 82 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-11-201ENST00000363616 82 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-5-201ENST00000363633 82 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-39-201ENST00000363694 82 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-4-201ENST00000363810 82 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-16-201ENST00000363887 82 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-6-201ENST00000363942 82 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-42-201ENST00000364273 82 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-15-201ENST00000364809 81 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-1-201ENST00000364961 82 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-26-201ENST00000365067 82 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-10-201ENST00000365073 81 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-43-201ENST00000365503 82 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-36-201ENST00000365629 82 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 MIR597-201ENST00000384968 97 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORA48.1-201ENST00000390879 135 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 U8.17-201ENST00000391292 132 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 AC015922.2-201ENST00000435593 184 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 HSPE1P9-201ENST00000440046 311 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 RNU7-96P-201ENST00000459535 64 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 RNU6-1116P-201ENST00000517269 99 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 AC078899.2-201ENST00000595282 212 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 SNORD115-40-201ENST00000606510 82 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 AL589743.1-201ENST00000551932 2712 ntBASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
DEPDC4Q8N2C3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
DEPDC4Q8N2C3 Y_RNA.323-201ENST00000365157 109 ntBASIC3.09□□□□□ -1.91
DEPDC4Q8N2C3 SNORA27-201ENST00000384323 126 ntBASIC3.09□□□□□ -1.91
DEPDC4Q8N2C3 MIR520A-201ENST00000384862 85 ntBASIC3.09□□□□□ -1.91
DEPDC4Q8N2C3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
DEPDC4Q8N2C3 RNU6-554P-201ENST00000410466 106 ntBASIC3.09□□□□□ -1.91
DEPDC4Q8N2C3 AL035398.1-201ENST00000430869 322 ntBASIC3.09□□□□□ -1.91
DEPDC4Q8N2C3 CST9LP2-201ENST00000437612 320 ntBASIC3.09□□□□□ -1.91
DEPDC4Q8N2C3 RPPH1-2P-201ENST00000516688 293 ntBASIC3.09□□□□□ -1.91
DEPDC4Q8N2C3 RN7SKP57-201ENST00000517248 293 ntBASIC3.09□□□□□ -1.91
DEPDC4Q8N2C3 AC009831.4-201ENST00000620744 325 ntBASIC3.09□□□□□ -1.91
DEPDC4Q8N2C3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 MIR450A1-201ENST00000362262 91 ntBASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 Y_RNA.549-201ENST00000384657 102 ntBASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 RNU6-1031P-201ENST00000384773 107 ntBASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 U8.16-201ENST00000391279 133 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms