Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 RNU2-40P-201ENST00000410833 196 ntBASIC2.07□□□□□ -2.08
RFX6Q8HWS3 RNU7-141P-201ENST00000459304 62 ntBASIC2.07□□□□□ -2.08
RFX6Q8HWS3 Y_RNA.797-201ENST00000515977 94 ntBASIC2.07□□□□□ -2.08
RFX6Q8HWS3 RNU7-99P-201ENST00000516271 62 ntBASIC2.07□□□□□ -2.08
RFX6Q8HWS3 RNU1-142P-201ENST00000516682 145 ntBASIC2.07□□□□□ -2.08
RFX6Q8HWS3 RNU7-116P-201ENST00000516940 62 ntBASIC2.07□□□□□ -2.08
RFX6Q8HWS3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.07□□□□□ -2.08
RFX6Q8HWS3 MIR548X2-201ENST00000579776 100 ntBASIC2.07□□□□□ -2.08
RFX6Q8HWS3 AC005786.1-201ENST00000588553 154 ntBASIC2.07□□□□□ -2.08
RFX6Q8HWS3 AL627230.6-201ENST00000611129 280 ntBASIC2.07□□□□□ -2.08
RFX6Q8HWS3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RFX6Q8HWS3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.07□□□□□ -2.08
RFX6Q8HWS3 RNU6-862P-201ENST00000362804 105 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 Y_RNA.81-201ENST00000362997 102 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.06□□□□□ -2.08
RFX6Q8HWS3 RNU6-1323P-201ENST00000384025 107 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 MIR616-201ENST00000385293 97 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 MIR526A2-201ENST00000390198 65 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 RNU6-1154P-201ENST00000391001 104 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 RNU11-3P-201ENST00000391111 133 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 RNA5SP465-201ENST00000391195 109 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 RNA5SP467-201ENST00000391274 118 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 RNA5SP425-201ENST00000410336 112 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 RNA5SP511-201ENST00000410487 115 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.06□□□□□ -2.08
RFX6Q8HWS3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.06□□□□□ -2.08
RFX6Q8HWS3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.06□□□□□ -2.08
RFX6Q8HWS3 AC079804.2-201ENST00000490376 200 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 RNU6-313P-201ENST00000516317 112 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.06□□□□□ -2.08
RFX6Q8HWS3 AC024995.1-201ENST00000523014 93 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 AC109810.1-201ENST00000534066 224 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 AC015720.1-201ENST00000565251 277 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 MIR5089-201ENST00000580047 84 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 MIR5688-201ENST00000580619 83 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 SNRPGP19-201ENST00000603826 189 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 AC073413.2-201ENST00000604332 360 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 MIR548AY-201ENST00000617669 107 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 AL590808.1-201ENST00000618696 141 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 AC091895.1-201ENST00000624494 256 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 AC064859.1-201ENST00000624741 174 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 MIR3658-201ENST00000636291 56 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 MIR219B-201ENST00000637023 88 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 AC010332.2-201ENST00000613083 1904 ntBASIC2.06□□□□□ -2.08
RFX6Q8HWS3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RFX6Q8HWS3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RFX6Q8HWS3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RFX6Q8HWS3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
RFX6Q8HWS3 Y_RNA.24-201ENST00000362508 103 ntBASIC2.05□□□□□ -2.08
RFX6Q8HWS3 RNU6-1205P-201ENST00000363625 106 ntBASIC2.05□□□□□ -2.08
RFX6Q8HWS3 Y_RNA.218-201ENST00000364218 104 ntBASIC2.05□□□□□ -2.08
RFX6Q8HWS3 U8.7-201ENST00000364940 136 ntBASIC2.05□□□□□ -2.08
RFX6Q8HWS3 RNU6-136P-201ENST00000384663 107 ntBASIC2.05□□□□□ -2.08
RFX6Q8HWS3 SNORA3.2-201ENST00000408221 125 ntBASIC2.05□□□□□ -2.08
RFX6Q8HWS3 RN7SKP223-201ENST00000410582 62 ntBASIC2.05□□□□□ -2.08
RFX6Q8HWS3 HMGN2P19-201ENST00000425149 265 ntBASIC2.05□□□□□ -2.08
RFX6Q8HWS3 MTND4LP9-201ENST00000427694 174 ntBASIC2.05□□□□□ -2.08
RFX6Q8HWS3 RNU7-197P-201ENST00000458836 62 ntBASIC2.05□□□□□ -2.08
RFX6Q8HWS3 AC117454.1-201ENST00000491120 168 ntBASIC2.05□□□□□ -2.08
RFX6Q8HWS3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.05□□□□□ -2.08
RFX6Q8HWS3 RNU7-115P-201ENST00000516433 55 ntBASIC2.05□□□□□ -2.08
RFX6Q8HWS3 DNAJC19P2-201ENST00000593340 302 ntBASIC2.05□□□□□ -2.08
RFX6Q8HWS3 POLR3GP1-201ENST00000594073 261 ntBASIC2.05□□□□□ -2.08
RFX6Q8HWS3 AP003357.1-201ENST00000604497 148 ntBASIC2.05□□□□□ -2.08
RFX6Q8HWS3 Y_RNA.802-201ENST00000614892 130 ntBASIC2.05□□□□□ -2.08
RFX6Q8HWS3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RFX6Q8HWS3 Y_RNA.293-201ENST00000364908 93 ntBASIC2.04□□□□□ -2.08
RFX6Q8HWS3 RNU6-969P-201ENST00000383900 105 ntBASIC2.04□□□□□ -2.08
RFX6Q8HWS3 SNORA8-201ENST00000384574 139 ntBASIC2.04□□□□□ -2.08
RFX6Q8HWS3 MIR597-201ENST00000384968 97 ntBASIC2.04□□□□□ -2.08
RFX6Q8HWS3 MT-TT-201ENST00000387460 66 ntBASIC2.04□□□□□ -2.08
RFX6Q8HWS3 MIR1278-201ENST00000408753 81 ntBASIC2.04□□□□□ -2.08
RFX6Q8HWS3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.04□□□□□ -2.08
RFX6Q8HWS3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.04□□□□□ -2.08
RFX6Q8HWS3 MRPS17P9-201ENST00000511924 393 ntBASIC2.04□□□□□ -2.08
RFX6Q8HWS3 RNU7-128P-201ENST00000517247 62 ntBASIC2.04□□□□□ -2.08
RFX6Q8HWS3 AL391903.3-201ENST00000612158 163 ntBASIC2.04□□□□□ -2.08
RFX6Q8HWS3 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.04□□□□□ -2.08
RFX6Q8HWS3 AC008555.8-201ENST00000623602 2168 ntBASIC2.03□□□□□ -2.08
RFX6Q8HWS3 SNORA33-201ENST00000363664 130 ntBASIC2.03□□□□□ -2.08
RFX6Q8HWS3 RNA5SP205-201ENST00000364653 136 ntBASIC2.03□□□□□ -2.08
RFX6Q8HWS3 RNU4-11P-201ENST00000365287 132 ntBASIC2.03□□□□□ -2.08
RFX6Q8HWS3 RNU6-144P-201ENST00000383951 107 ntBASIC2.03□□□□□ -2.08
RFX6Q8HWS3 RNU4-52P-201ENST00000384209 138 ntBASIC2.03□□□□□ -2.08
RFX6Q8HWS3 MIR520G-201ENST00000385064 90 ntBASIC2.03□□□□□ -2.08
RFX6Q8HWS3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RFX6Q8HWS3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.03□□□□□ -2.08
RFX6Q8HWS3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.03□□□□□ -2.08
RFX6Q8HWS3 MIR1283-2-201ENST00000408621 87 ntBASIC2.03□□□□□ -2.08
RFX6Q8HWS3 AC099677.2-201ENST00000436385 175 ntBASIC2.03□□□□□ -2.08
RFX6Q8HWS3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.03□□□□□ -2.08
RFX6Q8HWS3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.03□□□□□ -2.08
RFX6Q8HWS3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.03□□□□□ -2.08
RFX6Q8HWS3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.03□□□□□ -2.08
RFX6Q8HWS3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.03□□□□□ -2.08
RFX6Q8HWS3 RPL23AP42-201ENST00000471152 471 ntBASIC2.03□□□□□ -2.08
RFX6Q8HWS3 AC107027.2-201ENST00000512197 115 ntBASIC2.03□□□□□ -2.08
RFX6Q8HWS3 RNU6-561P-201ENST00000516222 102 ntBASIC2.03□□□□□ -2.08
RFX6Q8HWS3 AC127455.1-201ENST00000565496 145 ntBASIC2.03□□□□□ -2.08
RFX6Q8HWS3 AL096840.1-201ENST00000603287 93 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms