Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 MIR524-201ENST00000385242 87 ntBASIC2.44□□□□□ -2.02
DDX53Q86TM3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.44□□□□□ -2.02
DDX53Q86TM3 RNU6-1135P-201ENST00000411083 103 ntBASIC2.44□□□□□ -2.02
DDX53Q86TM3 SNRPGP10-201ENST00000432323 225 ntBASIC2.44□□□□□ -2.02
DDX53Q86TM3 SUMO1P3-201ENST00000439961 304 ntBASIC2.44□□□□□ -2.02
DDX53Q86TM3 AC023449.1-201ENST00000454464 154 ntBASIC2.44□□□□□ -2.02
DDX53Q86TM3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.44□□□□□ -2.02
DDX53Q86TM3 RNU6-255P-201ENST00000516957 105 ntBASIC2.44□□□□□ -2.02
DDX53Q86TM3 SUB1P4-201ENST00000566062 339 ntBASIC2.44□□□□□ -2.02
DDX53Q86TM3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.44□□□□□ -2.02
DDX53Q86TM3 uc_338.4-201ENST00000616635 176 ntBASIC2.44□□□□□ -2.02
DDX53Q86TM3 AC012640.5-201ENST00000623897 319 ntBASIC2.44□□□□□ -2.02
DDX53Q86TM3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
DDX53Q86TM3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
DDX53Q86TM3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.43□□□□□ -2.02
DDX53Q86TM3 Y_RNA.8-201ENST00000362353 102 ntBASIC2.43□□□□□ -2.02
DDX53Q86TM3 Y_RNA.357-201ENST00000365487 109 ntBASIC2.43□□□□□ -2.02
DDX53Q86TM3 SNORA12.1-201ENST00000390873 148 ntBASIC2.43□□□□□ -2.02
DDX53Q86TM3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.43□□□□□ -2.02
DDX53Q86TM3 MLLT10P1-201ENST00000418346 262 ntBASIC2.43□□□□□ -2.02
DDX53Q86TM3 MTND2P29-201ENST00000438595 412 ntBASIC2.43□□□□□ -2.02
DDX53Q86TM3 MIR8054-201ENST00000620877 86 ntBASIC2.43□□□□□ -2.02
DDX53Q86TM3 AC021753.1-201ENST00000635724 168 ntBASIC2.43□□□□□ -2.02
DDX53Q86TM3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
DDX53Q86TM3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
DDX53Q86TM3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
DDX53Q86TM3 SNORA63D-201ENST00000364359 132 ntBASIC2.42□□□□□ -2.02
DDX53Q86TM3 Y_RNA.265-201ENST00000364677 108 ntBASIC2.42□□□□□ -2.02
DDX53Q86TM3 RNU1-51P-201ENST00000365345 176 ntBASIC2.42□□□□□ -2.02
DDX53Q86TM3 RNU6-440P-201ENST00000390882 105 ntBASIC2.42□□□□□ -2.02
DDX53Q86TM3 SNORD23.1-201ENST00000408212 104 ntBASIC2.42□□□□□ -2.02
DDX53Q86TM3 RNA5SP181-201ENST00000410246 98 ntBASIC2.42□□□□□ -2.02
DDX53Q86TM3 RNU6-394P-201ENST00000410735 107 ntBASIC2.42□□□□□ -2.02
DDX53Q86TM3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.42□□□□□ -2.02
DDX53Q86TM3 SNRPGP8-201ENST00000454064 226 ntBASIC2.42□□□□□ -2.02
DDX53Q86TM3 NDUFA4P2-201ENST00000489989 244 ntBASIC2.42□□□□□ -2.02
DDX53Q86TM3 RNU6-1212P-201ENST00000517023 104 ntBASIC2.42□□□□□ -2.02
DDX53Q86TM3 RNU2-19P-201ENST00000517288 84 ntBASIC2.42□□□□□ -2.02
DDX53Q86TM3 MIR4431-201ENST00000579990 94 ntBASIC2.42□□□□□ -2.02
DDX53Q86TM3 AL365434.2-201ENST00000607979 234 ntBASIC2.42□□□□□ -2.02
DDX53Q86TM3 U1.36-201ENST00000620684 176 ntBASIC2.42□□□□□ -2.02
DDX53Q86TM3 SNORD68-201ENST00000363214 84 ntBASIC2.41□□□□□ -2.02
DDX53Q86TM3 SNORD45.3-201ENST00000363836 72 ntBASIC2.41□□□□□ -2.02
DDX53Q86TM3 RNA5SP99-201ENST00000364020 114 ntBASIC2.41□□□□□ -2.02
DDX53Q86TM3 Y_RNA.272-201ENST00000364696 102 ntBASIC2.41□□□□□ -2.02
DDX53Q86TM3 SNORA4.2-201ENST00000365313 147 ntBASIC2.41□□□□□ -2.02
DDX53Q86TM3 MIR520A-201ENST00000384862 85 ntBASIC2.41□□□□□ -2.02
DDX53Q86TM3 RNU2-7P-201ENST00000410794 178 ntBASIC2.41□□□□□ -2.02
DDX53Q86TM3 HSPE1P9-201ENST00000440046 311 ntBASIC2.41□□□□□ -2.02
DDX53Q86TM3 STAG3L5P-204ENST00000443759 179 ntBASIC2.41□□□□□ -2.02
DDX53Q86TM3 AC011753.1-201ENST00000451001 220 ntBASIC2.41□□□□□ -2.02
DDX53Q86TM3 SNORA31.10-201ENST00000516482 106 ntBASIC2.41□□□□□ -2.02
DDX53Q86TM3 RNA5SP402-201ENST00000517148 110 ntBASIC2.41□□□□□ -2.02
DDX53Q86TM3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.41□□□□□ -2.02
DDX53Q86TM3 MIR3144-201ENST00000579460 79 ntBASIC2.41□□□□□ -2.02
DDX53Q86TM3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.41□□□□□ -2.02
DDX53Q86TM3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
DDX53Q86TM3 MIR21-201ENST00000362134 72 ntBASIC2.4□□□□□ -2.03
DDX53Q86TM3 RNU6-112P-201ENST00000363599 104 ntBASIC2.4□□□□□ -2.03
DDX53Q86TM3 RNU4-84P-201ENST00000364200 139 ntBASIC2.4□□□□□ -2.03
DDX53Q86TM3 SNORA64-201ENST00000384674 134 ntBASIC2.4□□□□□ -2.03
DDX53Q86TM3 MIR221-201ENST00000385135 110 ntBASIC2.4□□□□□ -2.03
DDX53Q86TM3 AL603908.1-201ENST00000406098 201 ntBASIC2.4□□□□□ -2.03
DDX53Q86TM3 AC006461.1-201ENST00000412637 326 ntBASIC2.4□□□□□ -2.03
DDX53Q86TM3 AC055731.1-201ENST00000474387 401 ntBASIC2.4□□□□□ -2.03
DDX53Q86TM3 AC005840.1-201ENST00000498412 377 ntBASIC2.4□□□□□ -2.03
DDX53Q86TM3 SNORD77.4-201ENST00000516158 81 ntBASIC2.4□□□□□ -2.03
DDX53Q86TM3 RNA5SP437-201ENST00000517249 129 ntBASIC2.4□□□□□ -2.03
DDX53Q86TM3 MIR6766-201ENST00000622641 72 ntBASIC2.4□□□□□ -2.03
DDX53Q86TM3 MIR219B-201ENST00000637023 88 ntBASIC2.4□□□□□ -2.03
DDX53Q86TM3 Y_RNA.398-201ENST00000383952 99 ntBASIC2.39□□□□□ -2.03
DDX53Q86TM3 RNU6-296P-201ENST00000384608 107 ntBASIC2.39□□□□□ -2.03
DDX53Q86TM3 MIR522-201ENST00000385071 87 ntBASIC2.39□□□□□ -2.03
DDX53Q86TM3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
DDX53Q86TM3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
DDX53Q86TM3 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.39□□□□□ -2.03
DDX53Q86TM3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.39□□□□□ -2.03
DDX53Q86TM3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.39□□□□□ -2.03
DDX53Q86TM3 RNU7-149P-201ENST00000516739 59 ntBASIC2.39□□□□□ -2.03
DDX53Q86TM3 MTND5P41-201ENST00000517498 206 ntBASIC2.39□□□□□ -2.03
DDX53Q86TM3 AC080100.1-201ENST00000624239 5356 ntBASIC2.39□□□□□ -2.03
DDX53Q86TM3 RNU6-774P-201ENST00000363238 107 ntBASIC2.38□□□□□ -2.03
DDX53Q86TM3 Y_RNA.170-201ENST00000363746 110 ntBASIC2.38□□□□□ -2.03
DDX53Q86TM3 RNU6-643P-201ENST00000384018 107 ntBASIC2.38□□□□□ -2.03
DDX53Q86TM3 RNU6-131P-201ENST00000391144 107 ntBASIC2.38□□□□□ -2.03
DDX53Q86TM3 RNA5SP482-201ENST00000391269 118 ntBASIC2.38□□□□□ -2.03
DDX53Q86TM3 AL158823.1-201ENST00000418441 478 ntBASIC2.38□□□□□ -2.03
DDX53Q86TM3 OR9P1P-201ENST00000496431 281 ntBASIC2.38□□□□□ -2.03
DDX53Q86TM3 RPL23AP63-201ENST00000498752 471 ntBASIC2.38□□□□□ -2.03
DDX53Q86TM3 RNA5SP458-201ENST00000516188 119 ntBASIC2.38□□□□□ -2.03
DDX53Q86TM3 RNU6-1299P-201ENST00000516316 100 ntBASIC2.38□□□□□ -2.03
DDX53Q86TM3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.38□□□□□ -2.03
DDX53Q86TM3 Pinc.1-201ENST00000616452 154 ntBASIC2.38□□□□□ -2.03
DDX53Q86TM3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
DDX53Q86TM3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
DDX53Q86TM3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
DDX53Q86TM3 RNU6-1130P-201ENST00000365434 107 ntBASIC2.37□□□□□ -2.03
DDX53Q86TM3 SNORD116-18-201ENST00000383961 92 ntBASIC2.37□□□□□ -2.03
DDX53Q86TM3 RNU6-484P-201ENST00000384016 107 ntBASIC2.37□□□□□ -2.03
DDX53Q86TM3 Y_RNA.432-201ENST00000384087 111 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms