Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SNORA28-201ENST00000606769 126 ntBASIC1.07□□□□□ -2.24
RAI1Q7Z5J4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
RAI1Q7Z5J4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.06□□□□□ -2.24
RAI1Q7Z5J4 RNU6-199P-201ENST00000362954 107 ntBASIC1.06□□□□□ -2.24
RAI1Q7Z5J4 Y_RNA.124-201ENST00000363339 93 ntBASIC1.06□□□□□ -2.24
RAI1Q7Z5J4 Y_RNA.326-201ENST00000365176 113 ntBASIC1.06□□□□□ -2.24
RAI1Q7Z5J4 Y_RNA.389-201ENST00000383924 113 ntBASIC1.06□□□□□ -2.24
RAI1Q7Z5J4 Y_RNA.455-201ENST00000384230 98 ntBASIC1.06□□□□□ -2.24
RAI1Q7Z5J4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.06□□□□□ -2.24
RAI1Q7Z5J4 LINC01399-202ENST00000458450 244 ntBASIC1.06□□□□□ -2.24
RAI1Q7Z5J4 RNU7-28P-201ENST00000516759 62 ntBASIC1.06□□□□□ -2.24
RAI1Q7Z5J4 RNU7-116P-201ENST00000516940 62 ntBASIC1.06□□□□□ -2.24
RAI1Q7Z5J4 RNU6-570P-201ENST00000517051 105 ntBASIC1.06□□□□□ -2.24
RAI1Q7Z5J4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.06□□□□□ -2.24
RAI1Q7Z5J4 RPS29P30-201ENST00000600975 111 ntBASIC1.06□□□□□ -2.24
RAI1Q7Z5J4 AL513534.2-201ENST00000603836 250 ntBASIC1.06□□□□□ -2.24
RAI1Q7Z5J4 MIR6078-201ENST00000611069 100 ntBASIC1.06□□□□□ -2.24
RAI1Q7Z5J4 MIR424-201ENST00000362227 98 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 SNORA33-201ENST00000363664 130 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 RNU6-144P-201ENST00000383951 107 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 RNU6-21P-201ENST00000384710 107 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 RNU6-1031P-201ENST00000384773 107 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 MT-TT-201ENST00000387460 66 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 Y_RNA.581-201ENST00000391017 97 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 AC024067.1-201ENST00000426199 223 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 MTCYBP6-201ENST00000441810 138 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 RNU7-141P-201ENST00000459304 62 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 RNA5SP220-201ENST00000516298 104 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 RNA5SP168-201ENST00000516642 112 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 Y_RNA.721-201ENST00000517207 102 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 RNU6-988P-201ENST00000519081 107 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 MIR4680-201ENST00000580906 66 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 FAM106DP-201ENST00000586416 501 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 AL357312.1-201ENST00000603879 298 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 UBE2WP1-201ENST00000362030 340 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 Y_RNA.133-201ENST00000363428 110 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 MTCO1P5-201ENST00000433573 344 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 RNU1-98P-201ENST00000458992 160 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 U8.19-201ENST00000459095 133 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 RNU7-34P-201ENST00000459394 64 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 RNU6-1007P-201ENST00000516586 107 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 AC100767.1-201ENST00000528178 123 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 AC006504.6-201ENST00000590142 199 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 AC022140.2-201ENST00000623500 188 ntBASIC1.05□□□□□ -2.24
RAI1Q7Z5J4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.04□□□□□ -2.24
RAI1Q7Z5J4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
RAI1Q7Z5J4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.04□□□□□ -2.24
RAI1Q7Z5J4 SNORD113-8-201ENST00000363497 74 ntBASIC1.04□□□□□ -2.24
RAI1Q7Z5J4 Y_RNA.210-201ENST00000364161 110 ntBASIC1.04□□□□□ -2.24
RAI1Q7Z5J4 Y_RNA.370-201ENST00000365589 108 ntBASIC1.04□□□□□ -2.24
RAI1Q7Z5J4 RNU6-136P-201ENST00000384663 107 ntBASIC1.04□□□□□ -2.24
RAI1Q7Z5J4 RNU6-955P-201ENST00000410497 104 ntBASIC1.04□□□□□ -2.24
RAI1Q7Z5J4 RNU6-397P-201ENST00000516226 104 ntBASIC1.04□□□□□ -2.24
RAI1Q7Z5J4 RNU6-165P-201ENST00000517170 99 ntBASIC1.04□□□□□ -2.24
RAI1Q7Z5J4 RNU7-128P-201ENST00000517247 62 ntBASIC1.04□□□□□ -2.24
RAI1Q7Z5J4 AL512310.8-201ENST00000550183 120 ntBASIC1.04□□□□□ -2.24
RAI1Q7Z5J4 AC136443.5-201ENST00000603741 370 ntBASIC1.04□□□□□ -2.24
RAI1Q7Z5J4 AC106754.2-201ENST00000623006 233 ntBASIC1.04□□□□□ -2.24
RAI1Q7Z5J4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
RAI1Q7Z5J4 snoU2_19.2-201ENST00000363024 80 ntBASIC1.03□□□□□ -2.24
RAI1Q7Z5J4 Y_RNA.145-201ENST00000363527 102 ntBASIC1.03□□□□□ -2.24
RAI1Q7Z5J4 RNU6-674P-201ENST00000363831 107 ntBASIC1.03□□□□□ -2.24
RAI1Q7Z5J4 RNU6-1109P-201ENST00000391187 107 ntBASIC1.03□□□□□ -2.24
RAI1Q7Z5J4 Y_RNA.602-201ENST00000410535 92 ntBASIC1.03□□□□□ -2.24
RAI1Q7Z5J4 MLLT10P1-201ENST00000418346 262 ntBASIC1.03□□□□□ -2.24
RAI1Q7Z5J4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.03□□□□□ -2.24
RAI1Q7Z5J4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.03□□□□□ -2.24
RAI1Q7Z5J4 RPS26P55-201ENST00000471178 356 ntBASIC1.03□□□□□ -2.24
RAI1Q7Z5J4 RNU4-57P-201ENST00000515980 135 ntBASIC1.03□□□□□ -2.24
RAI1Q7Z5J4 AC008737.2-201ENST00000599446 118 ntBASIC1.03□□□□□ -2.24
RAI1Q7Z5J4 RAC1P9-201ENST00000604990 392 ntBASIC1.03□□□□□ -2.24
RAI1Q7Z5J4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
RAI1Q7Z5J4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
RAI1Q7Z5J4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
RAI1Q7Z5J4 Y_RNA.64-201ENST00000362845 102 ntBASIC1.03□□□□□ -2.25
RAI1Q7Z5J4 Y_RNA.148-201ENST00000363557 117 ntBASIC1.03□□□□□ -2.25
RAI1Q7Z5J4 Y_RNA.216-201ENST00000364205 93 ntBASIC1.03□□□□□ -2.25
RAI1Q7Z5J4 RNU6-338P-201ENST00000383888 105 ntBASIC1.03□□□□□ -2.25
RAI1Q7Z5J4 RNU6-937P-201ENST00000384325 106 ntBASIC1.03□□□□□ -2.25
RAI1Q7Z5J4 HSPE1P21-201ENST00000438283 308 ntBASIC1.03□□□□□ -2.25
RAI1Q7Z5J4 RNU6-437P-201ENST00000459408 95 ntBASIC1.03□□□□□ -2.25
RAI1Q7Z5J4 Y_RNA.711-201ENST00000516993 102 ntBASIC1.03□□□□□ -2.25
RAI1Q7Z5J4 AC104695.3-201ENST00000604052 296 ntBASIC1.03□□□□□ -2.25
RAI1Q7Z5J4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
RAI1Q7Z5J4 Y_RNA.136-201ENST00000363444 102 ntBASIC1.02□□□□□ -2.25
RAI1Q7Z5J4 Y_RNA.242-201ENST00000364473 110 ntBASIC1.02□□□□□ -2.25
RAI1Q7Z5J4 SNORA25.8-201ENST00000364831 128 ntBASIC1.02□□□□□ -2.25
RAI1Q7Z5J4 SNORA72-201ENST00000384339 132 ntBASIC1.02□□□□□ -2.25
RAI1Q7Z5J4 MIR136-201ENST00000385207 82 ntBASIC1.02□□□□□ -2.25
RAI1Q7Z5J4 MIR660-201ENST00000385235 97 ntBASIC1.02□□□□□ -2.25
RAI1Q7Z5J4 RNA5SP109-201ENST00000391010 116 ntBASIC1.02□□□□□ -2.25
RAI1Q7Z5J4 AL135790.2-201ENST00000437701 267 ntBASIC1.02□□□□□ -2.25
RAI1Q7Z5J4 AC245047.7-201ENST00000440265 293 ntBASIC1.02□□□□□ -2.25
RAI1Q7Z5J4 RPL30P7-201ENST00000479312 323 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 1800.5 ms