Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 RPS12P2-201ENST00000439728 269 ntBASIC2.58□□□□□ -2
LIMS2Q7Z4I7 Y_RNA.677-201ENST00000516401 85 ntBASIC2.58□□□□□ -2
LIMS2Q7Z4I7 RNU6-504P-201ENST00000516568 104 ntBASIC2.58□□□□□ -2
LIMS2Q7Z4I7 SCARNA11.3-201ENST00000517276 130 ntBASIC2.58□□□□□ -2
LIMS2Q7Z4I7 U2.20-201ENST00000613956 192 ntBASIC2.58□□□□□ -2
LIMS2Q7Z4I7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.58□□□□□ -2
LIMS2Q7Z4I7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
LIMS2Q7Z4I7 RNU6-438P-201ENST00000365561 103 ntBASIC2.57□□□□□ -2
LIMS2Q7Z4I7 RNU6-554P-201ENST00000410466 106 ntBASIC2.57□□□□□ -2
LIMS2Q7Z4I7 RN7SKP284-201ENST00000411002 343 ntBASIC2.57□□□□□ -2
LIMS2Q7Z4I7 CALM2P4-201ENST00000430810 426 ntBASIC2.57□□□□□ -2
LIMS2Q7Z4I7 MICF-203ENST00000432679 129 ntBASIC2.57□□□□□ -2
LIMS2Q7Z4I7 RNU6-412P-201ENST00000516434 106 ntBASIC2.57□□□□□ -2
LIMS2Q7Z4I7 RNU6-113P-201ENST00000516653 101 ntBASIC2.57□□□□□ -2
LIMS2Q7Z4I7 PRELID2P1-201ENST00000552837 301 ntBASIC2.57□□□□□ -2
LIMS2Q7Z4I7 AC106754.2-201ENST00000623006 233 ntBASIC2.57□□□□□ -2
LIMS2Q7Z4I7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LIMS2Q7Z4I7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.56□□□□□ -2
LIMS2Q7Z4I7 ZNF271P-202ENST00000465539 1970 ntBASIC2.56□□□□□ -2
LIMS2Q7Z4I7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
LIMS2Q7Z4I7 RNU6-905P-201ENST00000384434 107 ntBASIC2.56□□□□□ -2
LIMS2Q7Z4I7 RN7SL636P-201ENST00000497504 294 ntBASIC2.56□□□□□ -2
LIMS2Q7Z4I7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.56□□□□□ -2
LIMS2Q7Z4I7 AC234781.5-201ENST00000508429 271 ntBASIC2.56□□□□□ -2
LIMS2Q7Z4I7 AC026436.1-201ENST00000510537 270 ntBASIC2.56□□□□□ -2
LIMS2Q7Z4I7 MRPS17P9-201ENST00000511924 393 ntBASIC2.56□□□□□ -2
LIMS2Q7Z4I7 SCARNA15-202ENST00000516881 127 ntBASIC2.56□□□□□ -2
LIMS2Q7Z4I7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.56□□□□□ -2
LIMS2Q7Z4I7 MIR3129-201ENST00000581095 76 ntBASIC2.56□□□□□ -2
LIMS2Q7Z4I7 AC046143.2-201ENST00000609789 160 ntBASIC2.56□□□□□ -2
LIMS2Q7Z4I7 MIR340-201ENST00000362125 95 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 RNU6-888P-201ENST00000363010 101 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 Y_RNA.85-201ENST00000363014 111 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 RNU6-1107P-201ENST00000364817 104 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 RNA5SP126-201ENST00000365092 109 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 Y_RNA.348-201ENST00000365403 103 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 SNORD24-201ENST00000383884 75 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 SNORD61-201ENST00000384252 73 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 Y_RNA.528-201ENST00000384575 108 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 MIR520G-201ENST00000385064 90 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.55□□□□□ -2
LIMS2Q7Z4I7 MIR1263-201ENST00000408324 86 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 RNA5SP136-201ENST00000410906 107 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 RNU6-1328P-201ENST00000410938 106 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.55□□□□□ -2
LIMS2Q7Z4I7 AC093259.1-201ENST00000509755 300 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 RNU6-856P-201ENST00000516959 98 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 RNU6-1096P-201ENST00000517089 102 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 AC007012.1-201ENST00000567192 175 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 MIR5007-201ENST00000583098 95 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 JPX_2.1-201ENST00000614161 69 ntBASIC2.55□□□□□ -2
LIMS2Q7Z4I7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.55□□□□□ -2
LIMS2Q7Z4I7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
LIMS2Q7Z4I7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
LIMS2Q7Z4I7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.55□□□□□ -2
LIMS2Q7Z4I7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.55□□□□□ -2
LIMS2Q7Z4I7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.54□□□□□ -2
LIMS2Q7Z4I7 MIR21-201ENST00000362134 72 ntBASIC2.54□□□□□ -2
LIMS2Q7Z4I7 RNU6-640P-201ENST00000363693 105 ntBASIC2.54□□□□□ -2
LIMS2Q7Z4I7 SNORA67.1-201ENST00000364749 141 ntBASIC2.54□□□□□ -2
LIMS2Q7Z4I7 Y_RNA.332-201ENST00000365271 113 ntBASIC2.54□□□□□ -2
LIMS2Q7Z4I7 MIR570-201ENST00000384917 97 ntBASIC2.54□□□□□ -2
LIMS2Q7Z4I7 MIR627-201ENST00000384979 97 ntBASIC2.54□□□□□ -2
LIMS2Q7Z4I7 RNA5SP82-201ENST00000516707 92 ntBASIC2.54□□□□□ -2
LIMS2Q7Z4I7 RNA5SP490-201ENST00000517141 136 ntBASIC2.54□□□□□ -2
LIMS2Q7Z4I7 RNU6-537P-201ENST00000517277 103 ntBASIC2.54□□□□□ -2
LIMS2Q7Z4I7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.54□□□□□ -2
LIMS2Q7Z4I7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.54□□□□□ -2
LIMS2Q7Z4I7 AL590808.1-201ENST00000618696 141 ntBASIC2.54□□□□□ -2
LIMS2Q7Z4I7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.54□□□□□ -2
LIMS2Q7Z4I7 AC009487.2-201ENST00000420969 6821 ntBASIC2.54□□□□□ -2
LIMS2Q7Z4I7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.54□□□□□ -2
LIMS2Q7Z4I7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LIMS2Q7Z4I7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
LIMS2Q7Z4I7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.53□□□□□ -2
LIMS2Q7Z4I7 RNU6-766P-201ENST00000362478 107 ntBASIC2.53□□□□□ -2
LIMS2Q7Z4I7 Y_RNA.328-201ENST00000365208 113 ntBASIC2.53□□□□□ -2
LIMS2Q7Z4I7 MIR548A2-201ENST00000384956 97 ntBASIC2.53□□□□□ -2
LIMS2Q7Z4I7 MIR95-201ENST00000385072 81 ntBASIC2.53□□□□□ -2
LIMS2Q7Z4I7 SNORD77.3-201ENST00000391113 65 ntBASIC2.53□□□□□ -2
LIMS2Q7Z4I7 RNY4P30-201ENST00000410216 95 ntBASIC2.53□□□□□ -2
LIMS2Q7Z4I7 AC123900.1-201ENST00000420390 96 ntBASIC2.53□□□□□ -2
LIMS2Q7Z4I7 AC060773.1-201ENST00000421698 310 ntBASIC2.53□□□□□ -2
LIMS2Q7Z4I7 AC104389.3-201ENST00000445629 235 ntBASIC2.53□□□□□ -2
LIMS2Q7Z4I7 COX6CP6-201ENST00000490840 228 ntBASIC2.53□□□□□ -2
LIMS2Q7Z4I7 HMGN1P7-201ENST00000491722 313 ntBASIC2.53□□□□□ -2
LIMS2Q7Z4I7 RPS29P21-201ENST00000496272 170 ntBASIC2.53□□□□□ -2
LIMS2Q7Z4I7 MRPS36P2-201ENST00000512569 299 ntBASIC2.53□□□□□ -2
LIMS2Q7Z4I7 SNORA31.11-201ENST00000516528 139 ntBASIC2.53□□□□□ -2
LIMS2Q7Z4I7 RNU6-965P-201ENST00000516721 96 ntBASIC2.53□□□□□ -2
LIMS2Q7Z4I7 RNU7-128P-201ENST00000517247 62 ntBASIC2.53□□□□□ -2
LIMS2Q7Z4I7 AC008507.4-201ENST00000585464 127 ntBASIC2.53□□□□□ -2
LIMS2Q7Z4I7 AC009831.4-201ENST00000620744 325 ntBASIC2.53□□□□□ -2
LIMS2Q7Z4I7 MIR6073-201ENST00000352083 89 ntBASIC2.52□□□□□ -2.01
LIMS2Q7Z4I7 RNA5SP125-201ENST00000364843 120 ntBASIC2.52□□□□□ -2.01
LIMS2Q7Z4I7 Y_RNA.549-201ENST00000384657 102 ntBASIC2.52□□□□□ -2.01
LIMS2Q7Z4I7 SNORD72-201ENST00000390994 80 ntBASIC2.52□□□□□ -2.01
LIMS2Q7Z4I7 RNU2-48P-201ENST00000410694 191 ntBASIC2.52□□□□□ -2.01
LIMS2Q7Z4I7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.52□□□□□ -2.01
LIMS2Q7Z4I7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 238.9 ms