Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.68□□□□□ -1.98
RNF111Q6ZNA4 CST2P1-201ENST00000425770 87 ntBASIC2.68□□□□□ -1.98
RNF111Q6ZNA4 AC104332.2-201ENST00000429959 156 ntBASIC2.68□□□□□ -1.98
RNF111Q6ZNA4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.68□□□□□ -1.98
RNF111Q6ZNA4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.68□□□□□ -1.98
RNF111Q6ZNA4 AC024995.1-201ENST00000523014 93 ntBASIC2.68□□□□□ -1.98
RNF111Q6ZNA4 AC091544.4-201ENST00000555268 342 ntBASIC2.68□□□□□ -1.98
RNF111Q6ZNA4 MIR4679-2-201ENST00000578358 77 ntBASIC2.68□□□□□ -1.98
RNF111Q6ZNA4 MIR376A2-201ENST00000636782 80 ntBASIC2.68□□□□□ -1.98
RNF111Q6ZNA4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNF111Q6ZNA4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.67□□□□□ -1.98
RNF111Q6ZNA4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.67□□□□□ -1.98
RNF111Q6ZNA4 AC008555.8-201ENST00000623602 2168 ntBASIC2.67□□□□□ -1.98
RNF111Q6ZNA4 Y_RNA.242-201ENST00000364473 110 ntBASIC2.67□□□□□ -1.98
RNF111Q6ZNA4 RNU6-880P-201ENST00000384526 107 ntBASIC2.67□□□□□ -1.98
RNF111Q6ZNA4 AL139132.1-201ENST00000431587 344 ntBASIC2.67□□□□□ -1.98
RNF111Q6ZNA4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.67□□□□□ -1.98
RNF111Q6ZNA4 SNORA9.3-201ENST00000516383 129 ntBASIC2.67□□□□□ -1.98
RNF111Q6ZNA4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.67□□□□□ -1.98
RNF111Q6ZNA4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RNF111Q6ZNA4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.67□□□□□ -1.98
RNF111Q6ZNA4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.66□□□□□ -1.98
RNF111Q6ZNA4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.66□□□□□ -1.98
RNF111Q6ZNA4 RNU6-1084P-201ENST00000362498 107 ntBASIC2.66□□□□□ -1.98
RNF111Q6ZNA4 RNU6-23P-201ENST00000363283 107 ntBASIC2.66□□□□□ -1.98
RNF111Q6ZNA4 MIR548O-201ENST00000408583 114 ntBASIC2.66□□□□□ -1.98
RNF111Q6ZNA4 AC007064.1-201ENST00000412238 351 ntBASIC2.66□□□□□ -1.98
RNF111Q6ZNA4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.66□□□□□ -1.98
RNF111Q6ZNA4 AC099677.2-201ENST00000436385 175 ntBASIC2.66□□□□□ -1.98
RNF111Q6ZNA4 AL049873.1-201ENST00000480540 376 ntBASIC2.66□□□□□ -1.98
RNF111Q6ZNA4 SCARNA15-202ENST00000516881 127 ntBASIC2.66□□□□□ -1.98
RNF111Q6ZNA4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.66□□□□□ -1.98
RNF111Q6ZNA4 MIR3605-201ENST00000583214 100 ntBASIC2.66□□□□□ -1.98
RNF111Q6ZNA4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.66□□□□□ -1.98
RNF111Q6ZNA4 AL137790.1-201ENST00000634283 177 ntBASIC2.66□□□□□ -1.98
RNF111Q6ZNA4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RNF111Q6ZNA4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.65□□□□□ -1.98
RNF111Q6ZNA4 SNORD14E-201ENST00000364009 85 ntBASIC2.65□□□□□ -1.99
RNF111Q6ZNA4 Y_RNA.528-201ENST00000384575 108 ntBASIC2.65□□□□□ -1.99
RNF111Q6ZNA4 AL606517.2-201ENST00000442855 241 ntBASIC2.65□□□□□ -1.99
RNF111Q6ZNA4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.65□□□□□ -1.99
RNF111Q6ZNA4 MIR3169-201ENST00000578032 83 ntBASIC2.65□□□□□ -1.99
RNF111Q6ZNA4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.65□□□□□ -1.99
RNF111Q6ZNA4 U4atac.1-201ENST00000618345 95 ntBASIC2.65□□□□□ -1.99
RNF111Q6ZNA4 CTSLP2-204ENST00000629029 392 ntBASIC2.65□□□□□ -1.99
RNF111Q6ZNA4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
RNF111Q6ZNA4 Y_RNA.366-201ENST00000365540 102 ntBASIC2.64□□□□□ -1.99
RNF111Q6ZNA4 RNU6-442P-201ENST00000383968 104 ntBASIC2.64□□□□□ -1.99
RNF111Q6ZNA4 MIR627-201ENST00000384979 97 ntBASIC2.64□□□□□ -1.99
RNF111Q6ZNA4 CALM2P4-201ENST00000430810 426 ntBASIC2.64□□□□□ -1.99
RNF111Q6ZNA4 RNU7-25P-201ENST00000516544 62 ntBASIC2.64□□□□□ -1.99
RNF111Q6ZNA4 RNA5SP170-201ENST00000517150 101 ntBASIC2.64□□□□□ -1.99
RNF111Q6ZNA4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RNF111Q6ZNA4 AC007336.1-201ENST00000576365 3828 ntBASIC2.64□□□□□ -1.99
RNF111Q6ZNA4 MIR5197-201ENST00000583721 112 ntBASIC2.64□□□□□ -1.99
RNF111Q6ZNA4 AC022202.1-201ENST00000613515 211 ntBASIC2.64□□□□□ -1.99
RNF111Q6ZNA4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RNF111Q6ZNA4 RNA5SP109-201ENST00000391010 116 ntBASIC2.63□□□□□ -1.99
RNF111Q6ZNA4 COTL1P1-201ENST00000422309 375 ntBASIC2.63□□□□□ -1.99
RNF111Q6ZNA4 AC245047.3-201ENST00000429428 127 ntBASIC2.63□□□□□ -1.99
RNF111Q6ZNA4 AL109933.2-201ENST00000452651 260 ntBASIC2.63□□□□□ -1.99
RNF111Q6ZNA4 AL137067.1-201ENST00000615933 120 ntBASIC2.63□□□□□ -1.99
RNF111Q6ZNA4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 MIR450A1-201ENST00000362262 91 ntBASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 RNU6-268P-201ENST00000364174 107 ntBASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 Y_RNA.265-201ENST00000364677 108 ntBASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 snoU2-30.1-201ENST00000365012 70 ntBASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 SNORA2.2-201ENST00000365473 135 ntBASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 RNA5SP89-201ENST00000410300 108 ntBASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 AL135938.1-201ENST00000443141 297 ntBASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 AC104389.3-201ENST00000445629 235 ntBASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 RNU6-240P-201ENST00000516098 97 ntBASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 RNU6-168P-201ENST00000516189 101 ntBASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 SNORD45.4-201ENST00000516629 73 ntBASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 RNU6-113P-201ENST00000516653 101 ntBASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 MIR4762-201ENST00000585261 75 ntBASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 AC006441.5-201ENST00000612680 209 ntBASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 AC134878.1-201ENST00000619901 243 ntBASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 AC006386.2-201ENST00000624491 75 ntBASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 AC012005.1-201ENST00000624575 75 ntBASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.62□□□□□ -1.99
RNF111Q6ZNA4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 AL365361.1-201ENST00000566942 3481 ntBASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 MIR6073-201ENST00000352083 89 ntBASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 MIR26A1-201ENST00000362205 77 ntBASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 U8.5-201ENST00000364528 136 ntBASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 RNU6-1189P-201ENST00000383958 107 ntBASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 RN7SKP284-201ENST00000411002 343 ntBASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 HMGN2P35-201ENST00000412164 270 ntBASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 AC087499.2-201ENST00000432861 149 ntBASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 AC107083.1-201ENST00000439643 279 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms