Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.8□□□□□ -2.12
SYNE3Q6ZMZ3 RNU1-17P-201ENST00000363022 152 ntBASIC1.8□□□□□ -2.12
SYNE3Q6ZMZ3 RNU6-674P-201ENST00000363831 107 ntBASIC1.8□□□□□ -2.12
SYNE3Q6ZMZ3 RNU6-899P-201ENST00000363947 107 ntBASIC1.8□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.267-201ENST00000364679 109 ntBASIC1.8□□□□□ -2.12
SYNE3Q6ZMZ3 RNU6-203P-201ENST00000384038 104 ntBASIC1.8□□□□□ -2.12
SYNE3Q6ZMZ3 RNU6-196P-201ENST00000384315 107 ntBASIC1.8□□□□□ -2.12
SYNE3Q6ZMZ3 RNU6-136P-201ENST00000384663 107 ntBASIC1.8□□□□□ -2.12
SYNE3Q6ZMZ3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
SYNE3Q6ZMZ3 SNORD58.1-201ENST00000391313 66 ntBASIC1.8□□□□□ -2.12
SYNE3Q6ZMZ3 MIR1304-201ENST00000408243 91 ntBASIC1.8□□□□□ -2.12
SYNE3Q6ZMZ3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.8□□□□□ -2.12
SYNE3Q6ZMZ3 POLR3GP1-201ENST00000594073 261 ntBASIC1.8□□□□□ -2.12
SYNE3Q6ZMZ3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
SYNE3Q6ZMZ3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE3Q6ZMZ3 MIRLET7C-201ENST00000362160 84 ntBASIC1.79□□□□□ -2.12
SYNE3Q6ZMZ3 MIR302D-201ENST00000362275 68 ntBASIC1.79□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.14-201ENST00000362415 103 ntBASIC1.79□□□□□ -2.12
SYNE3Q6ZMZ3 RNU6-414P-201ENST00000363705 104 ntBASIC1.79□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.193-201ENST00000363979 102 ntBASIC1.79□□□□□ -2.12
SYNE3Q6ZMZ3 MIR30A-201ENST00000385092 71 ntBASIC1.79□□□□□ -2.12
SYNE3Q6ZMZ3 SNORA67.5-201ENST00000391036 107 ntBASIC1.79□□□□□ -2.12
SYNE3Q6ZMZ3 SNORA67.6-201ENST00000391093 99 ntBASIC1.79□□□□□ -2.12
SYNE3Q6ZMZ3 AL049830.1-201ENST00000468034 425 ntBASIC1.79□□□□□ -2.12
SYNE3Q6ZMZ3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE3Q6ZMZ3 SCARNA24.2-201ENST00000516968 130 ntBASIC1.79□□□□□ -2.12
SYNE3Q6ZMZ3 SNORA44.1-201ENST00000517031 108 ntBASIC1.79□□□□□ -2.12
SYNE3Q6ZMZ3 MIR4282-201ENST00000583613 67 ntBASIC1.79□□□□□ -2.12
SYNE3Q6ZMZ3 AC005357.1-201ENST00000588399 301 ntBASIC1.79□□□□□ -2.12
SYNE3Q6ZMZ3 AC012433.1-201ENST00000588916 398 ntBASIC1.79□□□□□ -2.12
SYNE3Q6ZMZ3 AC013791.1-201ENST00000616619 62 ntBASIC1.79□□□□□ -2.12
SYNE3Q6ZMZ3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE3Q6ZMZ3 MIR424-201ENST00000362227 98 ntBASIC1.78□□□□□ -2.12
SYNE3Q6ZMZ3 RNU6-1048P-201ENST00000364054 107 ntBASIC1.78□□□□□ -2.12
SYNE3Q6ZMZ3 RNU6-662P-201ENST00000384253 104 ntBASIC1.78□□□□□ -2.12
SYNE3Q6ZMZ3 RNU6-424P-201ENST00000384367 105 ntBASIC1.78□□□□□ -2.12
SYNE3Q6ZMZ3 RNU2-38P-201ENST00000410856 79 ntBASIC1.78□□□□□ -2.12
SYNE3Q6ZMZ3 Z98949.2-201ENST00000440996 144 ntBASIC1.78□□□□□ -2.12
SYNE3Q6ZMZ3 STAG3L5P-204ENST00000443759 179 ntBASIC1.78□□□□□ -2.12
SYNE3Q6ZMZ3 RNU7-34P-201ENST00000459394 64 ntBASIC1.78□□□□□ -2.12
SYNE3Q6ZMZ3 AC004817.2-201ENST00000561794 651 ntBASIC1.78□□□□□ -2.12
SYNE3Q6ZMZ3 AC015688.6-201ENST00000577737 104 ntBASIC1.78□□□□□ -2.12
SYNE3Q6ZMZ3 AL008718.3-201ENST00000610217 321 ntBASIC1.78□□□□□ -2.12
SYNE3Q6ZMZ3 AC068700.1-201ENST00000565862 3754 ntBASIC1.77□□□□□ -2.13
SYNE3Q6ZMZ3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE3Q6ZMZ3 RNU4-41P-201ENST00000364426 143 ntBASIC1.77□□□□□ -2.13
SYNE3Q6ZMZ3 Y_RNA.253-201ENST00000364562 112 ntBASIC1.77□□□□□ -2.13
SYNE3Q6ZMZ3 RNU6-702P-201ENST00000364982 107 ntBASIC1.77□□□□□ -2.13
SYNE3Q6ZMZ3 RNU6-144P-201ENST00000383951 107 ntBASIC1.77□□□□□ -2.13
SYNE3Q6ZMZ3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.77□□□□□ -2.13
SYNE3Q6ZMZ3 MIR548H3-201ENST00000408771 118 ntBASIC1.77□□□□□ -2.13
SYNE3Q6ZMZ3 RPL30P13-201ENST00000418873 348 ntBASIC1.77□□□□□ -2.13
SYNE3Q6ZMZ3 PGBD4P5-201ENST00000445958 426 ntBASIC1.77□□□□□ -2.13
SYNE3Q6ZMZ3 RNU6-1132P-201ENST00000459214 107 ntBASIC1.77□□□□□ -2.13
SYNE3Q6ZMZ3 Y_RNA.638-201ENST00000459374 113 ntBASIC1.77□□□□□ -2.13
SYNE3Q6ZMZ3 AC117454.1-201ENST00000491120 168 ntBASIC1.77□□□□□ -2.13
SYNE3Q6ZMZ3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.77□□□□□ -2.13
SYNE3Q6ZMZ3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.77□□□□□ -2.13
SYNE3Q6ZMZ3 MIR3149-201ENST00000584629 83 ntBASIC1.77□□□□□ -2.13
SYNE3Q6ZMZ3 AC073349.3-201ENST00000617616 186 ntBASIC1.77□□□□□ -2.13
SYNE3Q6ZMZ3 AC095038.3-201ENST00000634439 195 ntBASIC1.77□□□□□ -2.13
SYNE3Q6ZMZ3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SYNE3Q6ZMZ3 RNA5SP99-201ENST00000364020 114 ntBASIC1.76□□□□□ -2.13
SYNE3Q6ZMZ3 RNU6-740P-201ENST00000364734 105 ntBASIC1.76□□□□□ -2.13
SYNE3Q6ZMZ3 RNU6-60P-201ENST00000364792 103 ntBASIC1.76□□□□□ -2.13
SYNE3Q6ZMZ3 RNU6-1289P-201ENST00000384431 106 ntBASIC1.76□□□□□ -2.13
SYNE3Q6ZMZ3 SNORA17.3-201ENST00000391159 129 ntBASIC1.76□□□□□ -2.13
SYNE3Q6ZMZ3 MIR1267-201ENST00000408723 78 ntBASIC1.76□□□□□ -2.13
SYNE3Q6ZMZ3 SNORA36B-201ENST00000410438 131 ntBASIC1.76□□□□□ -2.13
SYNE3Q6ZMZ3 RNU6-437P-201ENST00000459408 95 ntBASIC1.76□□□□□ -2.13
SYNE3Q6ZMZ3 MTND1P19-201ENST00000511780 315 ntBASIC1.76□□□□□ -2.13
SYNE3Q6ZMZ3 SNORA31.24-201ENST00000517232 57 ntBASIC1.76□□□□□ -2.13
SYNE3Q6ZMZ3 AC062037.2-201ENST00000610137 73 ntBASIC1.76□□□□□ -2.13
SYNE3Q6ZMZ3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.76□□□□□ -2.13
SYNE3Q6ZMZ3 AL591926.4-201ENST00000616895 298 ntBASIC1.76□□□□□ -2.13
SYNE3Q6ZMZ3 snoU18.1-201ENST00000629629 71 ntBASIC1.76□□□□□ -2.13
SYNE3Q6ZMZ3 RNU1-42P-201ENST00000364033 160 ntBASIC1.75□□□□□ -2.13
SYNE3Q6ZMZ3 Y_RNA.203-201ENST00000364106 102 ntBASIC1.75□□□□□ -2.13
SYNE3Q6ZMZ3 Y_RNA.265-201ENST00000364677 108 ntBASIC1.75□□□□□ -2.13
SYNE3Q6ZMZ3 MIR660-201ENST00000385235 97 ntBASIC1.75□□□□□ -2.13
SYNE3Q6ZMZ3 AC004965.1-201ENST00000413033 213 ntBASIC1.75□□□□□ -2.13
SYNE3Q6ZMZ3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.75□□□□□ -2.13
SYNE3Q6ZMZ3 BTF3P11-201ENST00000426582 477 ntBASIC1.75□□□□□ -2.13
SYNE3Q6ZMZ3 AC233266.1-201ENST00000454518 96 ntBASIC1.75□□□□□ -2.13
SYNE3Q6ZMZ3 RPL39P38-201ENST00000467018 153 ntBASIC1.75□□□□□ -2.13
SYNE3Q6ZMZ3 HMGN1P7-201ENST00000491722 313 ntBASIC1.75□□□□□ -2.13
SYNE3Q6ZMZ3 MIR5692C2-201ENST00000577959 77 ntBASIC1.75□□□□□ -2.13
SYNE3Q6ZMZ3 MIR5688-201ENST00000580619 83 ntBASIC1.75□□□□□ -2.13
SYNE3Q6ZMZ3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.75□□□□□ -2.13
SYNE3Q6ZMZ3 AC242852.1-201ENST00000612151 96 ntBASIC1.75□□□□□ -2.13
SYNE3Q6ZMZ3 AC244015.1-201ENST00000622301 99 ntBASIC1.75□□□□□ -2.13
SYNE3Q6ZMZ3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE3Q6ZMZ3 AL442644.1-201ENST00000454390 3105 ntBASIC1.74□□□□□ -2.13
SYNE3Q6ZMZ3 MIR126-201ENST00000362291 85 ntBASIC1.74□□□□□ -2.13
SYNE3Q6ZMZ3 Y_RNA.20-201ENST00000362479 113 ntBASIC1.74□□□□□ -2.13
SYNE3Q6ZMZ3 Y_RNA.350-201ENST00000365409 98 ntBASIC1.74□□□□□ -2.13
SYNE3Q6ZMZ3 RNU6-338P-201ENST00000383888 105 ntBASIC1.74□□□□□ -2.13
SYNE3Q6ZMZ3 Y_RNA.416-201ENST00000384014 113 ntBASIC1.74□□□□□ -2.13
SYNE3Q6ZMZ3 RNU6-211P-201ENST00000384047 107 ntBASIC1.74□□□□□ -2.13
SYNE3Q6ZMZ3 MIR522-201ENST00000385071 87 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms