Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 SNORA22C-201ENST00000384614 134 ntBASIC1.32□□□□□ -2.2
CTR9Q6PD62 AC005534.2-201ENST00000431047 433 ntBASIC1.32□□□□□ -2.2
CTR9Q6PD62 OR2A41P-201ENST00000473586 105 ntBASIC1.32□□□□□ -2.2
CTR9Q6PD62 AC092991.1-201ENST00000477176 376 ntBASIC1.32□□□□□ -2.2
CTR9Q6PD62 RNU6-496P-201ENST00000516145 99 ntBASIC1.32□□□□□ -2.2
CTR9Q6PD62 MIR3937-201ENST00000580135 106 ntBASIC1.32□□□□□ -2.2
CTR9Q6PD62 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.32□□□□□ -2.2
CTR9Q6PD62 Y_RNA.418-201ENST00000384029 102 ntBASIC1.31□□□□□ -2.2
CTR9Q6PD62 Y_RNA.456-201ENST00000384232 111 ntBASIC1.31□□□□□ -2.2
CTR9Q6PD62 Y_RNA.602-201ENST00000410535 92 ntBASIC1.31□□□□□ -2.2
CTR9Q6PD62 AL591704.2-201ENST00000421658 181 ntBASIC1.31□□□□□ -2.2
CTR9Q6PD62 POLR2KP2-201ENST00000438155 177 ntBASIC1.31□□□□□ -2.2
CTR9Q6PD62 RPS29P28-201ENST00000446439 141 ntBASIC1.31□□□□□ -2.2
CTR9Q6PD62 AC093850.1-201ENST00000454121 251 ntBASIC1.31□□□□□ -2.2
CTR9Q6PD62 RNU6-1116P-201ENST00000517269 99 ntBASIC1.31□□□□□ -2.2
CTR9Q6PD62 AC131281.1-201ENST00000522984 164 ntBASIC1.31□□□□□ -2.2
CTR9Q6PD62 AL355297.3-201ENST00000604082 446 ntBASIC1.31□□□□□ -2.2
CTR9Q6PD62 AL078604.3-201ENST00000615580 211 ntBASIC1.31□□□□□ -2.2
CTR9Q6PD62 AL591926.4-201ENST00000616895 298 ntBASIC1.31□□□□□ -2.2
CTR9Q6PD62 AC106754.2-201ENST00000623006 233 ntBASIC1.31□□□□□ -2.2
CTR9Q6PD62 Y_RNA.26-201ENST00000362539 101 ntBASIC1.3□□□□□ -2.2
CTR9Q6PD62 RNU4-80P-201ENST00000363200 141 ntBASIC1.3□□□□□ -2.2
CTR9Q6PD62 Y_RNA.226-201ENST00000364337 114 ntBASIC1.3□□□□□ -2.2
CTR9Q6PD62 RNU6-806P-201ENST00000365147 105 ntBASIC1.3□□□□□ -2.2
CTR9Q6PD62 RNU6-1323P-201ENST00000384025 107 ntBASIC1.3□□□□□ -2.2
CTR9Q6PD62 SNORA72-201ENST00000384339 132 ntBASIC1.3□□□□□ -2.2
CTR9Q6PD62 SNX2P2-201ENST00000424553 323 ntBASIC1.3□□□□□ -2.2
CTR9Q6PD62 LINC01399-202ENST00000458450 244 ntBASIC1.3□□□□□ -2.2
CTR9Q6PD62 AC098869.1-201ENST00000481627 292 ntBASIC1.3□□□□□ -2.2
CTR9Q6PD62 MIR4295-201ENST00000585286 85 ntBASIC1.3□□□□□ -2.2
CTR9Q6PD62 AL121890.5-201ENST00000620848 304 ntBASIC1.3□□□□□ -2.2
CTR9Q6PD62 AC068647.2-201ENST00000637380 353 ntBASIC1.3□□□□□ -2.2
CTR9Q6PD62 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CTR9Q6PD62 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CTR9Q6PD62 RNU6-770P-201ENST00000363929 105 ntBASIC1.29□□□□□ -2.2
CTR9Q6PD62 Y_RNA.276-201ENST00000364732 109 ntBASIC1.29□□□□□ -2.2
CTR9Q6PD62 Y_RNA.581-201ENST00000391017 97 ntBASIC1.29□□□□□ -2.2
CTR9Q6PD62 Y_RNA.621-201ENST00000411065 96 ntBASIC1.29□□□□□ -2.2
CTR9Q6PD62 AC024067.1-201ENST00000426199 223 ntBASIC1.29□□□□□ -2.2
CTR9Q6PD62 RPL39P38-201ENST00000467018 153 ntBASIC1.29□□□□□ -2.2
CTR9Q6PD62 AL512310.8-201ENST00000550183 120 ntBASIC1.29□□□□□ -2.2
CTR9Q6PD62 MIR4762-201ENST00000585261 75 ntBASIC1.29□□□□□ -2.2
CTR9Q6PD62 AP003357.1-201ENST00000604497 148 ntBASIC1.29□□□□□ -2.2
CTR9Q6PD62 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
CTR9Q6PD62 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CTR9Q6PD62 RNU6-199P-201ENST00000362954 107 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 snoU2_19.2-201ENST00000363024 80 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 Y_RNA.136-201ENST00000363444 102 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 SNORD114-27-201ENST00000363766 70 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 RNU6-801P-201ENST00000364087 105 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 Y_RNA.210-201ENST00000364161 110 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 U8.5-201ENST00000364528 136 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 Y_RNA.253-201ENST00000364562 112 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 U8.7-201ENST00000364940 136 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 RNU6-1065P-201ENST00000384513 106 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 MIR215-201ENST00000384858 110 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 MIR653-201ENST00000385279 96 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CTR9Q6PD62 RNU6-985P-201ENST00000410182 104 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.28□□□□□ -2.2
CTR9Q6PD62 AC104332.1-201ENST00000440471 797 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 RNU7-12P-201ENST00000516030 62 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 RNU6-917P-201ENST00000516294 104 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.28□□□□□ -2.2
CTR9Q6PD62 AC024405.2-202ENST00000532731 184 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 MIR3664-201ENST00000579074 99 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.28□□□□□ -2.2
CTR9Q6PD62 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
CTR9Q6PD62 Y_RNA.19-201ENST00000362462 99 ntBASIC1.27□□□□□ -2.21
CTR9Q6PD62 SNORD68-201ENST00000363214 84 ntBASIC1.27□□□□□ -2.21
CTR9Q6PD62 SNORA25.9-201ENST00000365087 128 ntBASIC1.27□□□□□ -2.21
CTR9Q6PD62 MIR499A-201ENST00000384903 122 ntBASIC1.27□□□□□ -2.21
CTR9Q6PD62 MIR522-201ENST00000385071 87 ntBASIC1.27□□□□□ -2.21
CTR9Q6PD62 RNU2-14P-201ENST00000411053 191 ntBASIC1.27□□□□□ -2.21
CTR9Q6PD62 RNA5SP247-201ENST00000411181 105 ntBASIC1.27□□□□□ -2.21
CTR9Q6PD62 RPL21P38-201ENST00000418090 167 ntBASIC1.27□□□□□ -2.21
CTR9Q6PD62 AC087343.1-201ENST00000477341 475 ntBASIC1.27□□□□□ -2.21
CTR9Q6PD62 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.27□□□□□ -2.21
CTR9Q6PD62 RNU6-191P-201ENST00000516295 94 ntBASIC1.27□□□□□ -2.21
CTR9Q6PD62 RNU6-764P-201ENST00000516396 105 ntBASIC1.27□□□□□ -2.21
CTR9Q6PD62 RNU7-115P-201ENST00000516433 55 ntBASIC1.27□□□□□ -2.21
CTR9Q6PD62 SNORA40.15-201ENST00000516884 107 ntBASIC1.27□□□□□ -2.21
CTR9Q6PD62 AC136628.3-201ENST00000521868 290 ntBASIC1.27□□□□□ -2.21
CTR9Q6PD62 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.27□□□□□ -2.21
CTR9Q6PD62 POLR3GP1-201ENST00000594073 261 ntBASIC1.27□□□□□ -2.21
CTR9Q6PD62 SNORD114-21-201ENST00000606412 72 ntBASIC1.27□□□□□ -2.21
CTR9Q6PD62 MIR6504-201ENST00000613520 61 ntBASIC1.27□□□□□ -2.21
CTR9Q6PD62 MIR6767-201ENST00000637302 66 ntBASIC1.27□□□□□ -2.21
CTR9Q6PD62 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CTR9Q6PD62 RNU4-90P-201ENST00000362773 141 ntBASIC1.26□□□□□ -2.21
CTR9Q6PD62 RNU6-1048P-201ENST00000364054 107 ntBASIC1.26□□□□□ -2.21
CTR9Q6PD62 RNU6-639P-201ENST00000384074 107 ntBASIC1.26□□□□□ -2.21
CTR9Q6PD62 Y_RNA.541-201ENST00000384640 113 ntBASIC1.26□□□□□ -2.21
CTR9Q6PD62 Y_RNA.569-201ENST00000384749 103 ntBASIC1.26□□□□□ -2.21
CTR9Q6PD62 RNU6-1105P-201ENST00000384774 107 ntBASIC1.26□□□□□ -2.21
CTR9Q6PD62 SNORD41-201ENST00000386967 70 ntBASIC1.26□□□□□ -2.21
CTR9Q6PD62 SNORA26.5-201ENST00000391215 123 ntBASIC1.26□□□□□ -2.21
CTR9Q6PD62 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.26□□□□□ -2.21
CTR9Q6PD62 PIGPP3-201ENST00000425307 415 ntBASIC1.26□□□□□ -2.21
CTR9Q6PD62 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms