Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MIR4438-201ENST00000585271 93 ntBASIC2.79□□□□□ -1.96
CNKSR3Q6P9H4 AC106754.2-201ENST00000623006 233 ntBASIC2.79□□□□□ -1.96
CNKSR3Q6P9H4 MIR1248-201ENST00000629190 106 ntBASIC2.79□□□□□ -1.96
CNKSR3Q6P9H4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
CNKSR3Q6P9H4 AC009487.4-201ENST00000624969 3585 ntBASIC2.79□□□□□ -1.96
CNKSR3Q6P9H4 AC108206.1-201ENST00000570186 4159 ntBASIC2.79□□□□□ -1.96
CNKSR3Q6P9H4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CNKSR3Q6P9H4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CNKSR3Q6P9H4 MIR148B-201ENST00000362252 99 ntBASIC2.78□□□□□ -1.96
CNKSR3Q6P9H4 RNU6-1107P-201ENST00000364817 104 ntBASIC2.78□□□□□ -1.96
CNKSR3Q6P9H4 Y_RNA.348-201ENST00000365403 103 ntBASIC2.78□□□□□ -1.96
CNKSR3Q6P9H4 AC003685.2-201ENST00000422795 395 ntBASIC2.78□□□□□ -1.96
CNKSR3Q6P9H4 CALM2P4-201ENST00000430810 426 ntBASIC2.78□□□□□ -1.96
CNKSR3Q6P9H4 RPS29P6-201ENST00000438196 145 ntBASIC2.78□□□□□ -1.96
CNKSR3Q6P9H4 NDUFA4P2-201ENST00000489989 244 ntBASIC2.78□□□□□ -1.96
CNKSR3Q6P9H4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.78□□□□□ -1.96
CNKSR3Q6P9H4 AL355297.2-201ENST00000604792 129 ntBASIC2.78□□□□□ -1.96
CNKSR3Q6P9H4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.78□□□□□ -1.96
CNKSR3Q6P9H4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.78□□□□□ -1.96
CNKSR3Q6P9H4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.78□□□□□ -1.96
CNKSR3Q6P9H4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 RNU6-640P-201ENST00000363693 105 ntBASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 SNORD73B-201ENST00000364394 72 ntBASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 Y_RNA.528-201ENST00000384575 108 ntBASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 Y_RNA.549-201ENST00000384657 102 ntBASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 RPL21P3-201ENST00000395517 478 ntBASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 MIR1302-4-201ENST00000408701 150 ntBASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 HMGN2P18-201ENST00000450680 270 ntBASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 AP004217.1-201ENST00000480579 346 ntBASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 RNU6-965P-201ENST00000516721 96 ntBASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 RNU6-365P-201ENST00000517113 106 ntBASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 PRELID2P1-201ENST00000552837 301 ntBASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 MIR4662B-201ENST00000579498 81 ntBASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 MIR4648-201ENST00000580107 72 ntBASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 MAPK10-266ENST00000641066 6555 ntBASIC2.77□□□□□ -1.97
CNKSR3Q6P9H4 AC008264.2-201ENST00000610193 3731 ntBASIC2.76□□□□□ -1.97
CNKSR3Q6P9H4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
CNKSR3Q6P9H4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CNKSR3Q6P9H4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CNKSR3Q6P9H4 RNA5SP125-201ENST00000364843 120 ntBASIC2.76□□□□□ -1.97
CNKSR3Q6P9H4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CNKSR3Q6P9H4 RN7SKP223-201ENST00000410582 62 ntBASIC2.76□□□□□ -1.97
CNKSR3Q6P9H4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.76□□□□□ -1.97
CNKSR3Q6P9H4 AC018634.1-201ENST00000437554 401 ntBASIC2.76□□□□□ -1.97
CNKSR3Q6P9H4 MTATP6P21-201ENST00000440681 189 ntBASIC2.76□□□□□ -1.97
CNKSR3Q6P9H4 RN7SL636P-201ENST00000497504 294 ntBASIC2.76□□□□□ -1.97
CNKSR3Q6P9H4 AC007012.1-201ENST00000567192 175 ntBASIC2.76□□□□□ -1.97
CNKSR3Q6P9H4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.76□□□□□ -1.97
CNKSR3Q6P9H4 U6.73-201ENST00000619194 103 ntBASIC2.76□□□□□ -1.97
CNKSR3Q6P9H4 AP006437.1-201ENST00000641440 3685 ntBASIC2.75□□□□□ -1.97
CNKSR3Q6P9H4 Y_RNA.85-201ENST00000363014 111 ntBASIC2.75□□□□□ -1.97
CNKSR3Q6P9H4 AL356320.1-201ENST00000429616 163 ntBASIC2.75□□□□□ -1.97
CNKSR3Q6P9H4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CNKSR3Q6P9H4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.75□□□□□ -1.97
CNKSR3Q6P9H4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CNKSR3Q6P9H4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.75□□□□□ -1.97
CNKSR3Q6P9H4 U8.6-201ENST00000364939 135 ntBASIC2.74□□□□□ -1.97
CNKSR3Q6P9H4 RNU6-438P-201ENST00000365561 103 ntBASIC2.74□□□□□ -1.97
CNKSR3Q6P9H4 RNU1-109P-201ENST00000383960 147 ntBASIC2.74□□□□□ -1.97
CNKSR3Q6P9H4 SNORD61-201ENST00000384252 73 ntBASIC2.74□□□□□ -1.97
CNKSR3Q6P9H4 MIR95-201ENST00000385072 81 ntBASIC2.74□□□□□ -1.97
CNKSR3Q6P9H4 AL359511.1-201ENST00000402970 211 ntBASIC2.74□□□□□ -1.97
CNKSR3Q6P9H4 HMGN2P32-201ENST00000444648 269 ntBASIC2.74□□□□□ -1.97
CNKSR3Q6P9H4 RNU7-26P-201ENST00000458980 63 ntBASIC2.74□□□□□ -1.97
CNKSR3Q6P9H4 MRPS17P9-201ENST00000511924 393 ntBASIC2.74□□□□□ -1.97
CNKSR3Q6P9H4 RNU6-412P-201ENST00000516434 106 ntBASIC2.74□□□□□ -1.97
CNKSR3Q6P9H4 RNU6-504P-201ENST00000516568 104 ntBASIC2.74□□□□□ -1.97
CNKSR3Q6P9H4 RNU6-126P-201ENST00000516685 103 ntBASIC2.74□□□□□ -1.97
CNKSR3Q6P9H4 RNU6-1096P-201ENST00000517089 102 ntBASIC2.74□□□□□ -1.97
CNKSR3Q6P9H4 JPX_2.1-201ENST00000614161 69 ntBASIC2.74□□□□□ -1.97
CNKSR3Q6P9H4 AP001318.4-201ENST00000616637 121 ntBASIC2.74□□□□□ -1.97
CNKSR3Q6P9H4 AC009831.4-201ENST00000620744 325 ntBASIC2.74□□□□□ -1.97
CNKSR3Q6P9H4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CNKSR3Q6P9H4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CNKSR3Q6P9H4 AC093831.2-201ENST00000624393 3427 ntBASIC2.73□□□□□ -1.97
CNKSR3Q6P9H4 SNORA38-201ENST00000363946 132 ntBASIC2.73□□□□□ -1.97
CNKSR3Q6P9H4 SNORD114-30-201ENST00000364448 72 ntBASIC2.73□□□□□ -1.97
CNKSR3Q6P9H4 Y_RNA.328-201ENST00000365208 113 ntBASIC2.73□□□□□ -1.97
CNKSR3Q6P9H4 RNU6-1292P-201ENST00000383856 107 ntBASIC2.73□□□□□ -1.97
CNKSR3Q6P9H4 MIR561-201ENST00000385216 97 ntBASIC2.73□□□□□ -1.97
CNKSR3Q6P9H4 SNORD12C-201ENST00000386307 89 ntBASIC2.73□□□□□ -1.97
CNKSR3Q6P9H4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.73□□□□□ -1.97
CNKSR3Q6P9H4 AC234781.5-201ENST00000508429 271 ntBASIC2.73□□□□□ -1.97
CNKSR3Q6P9H4 RNU2-34P-201ENST00000516534 121 ntBASIC2.73□□□□□ -1.97
CNKSR3Q6P9H4 SNORA48.11-201ENST00000517015 89 ntBASIC2.73□□□□□ -1.97
CNKSR3Q6P9H4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.73□□□□□ -1.97
CNKSR3Q6P9H4 U2.20-201ENST00000613956 192 ntBASIC2.73□□□□□ -1.97
CNKSR3Q6P9H4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CNKSR3Q6P9H4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CNKSR3Q6P9H4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CNKSR3Q6P9H4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CNKSR3Q6P9H4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.72□□□□□ -1.97
CNKSR3Q6P9H4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
CNKSR3Q6P9H4 RNU6-766P-201ENST00000362478 107 ntBASIC2.72□□□□□ -1.97
CNKSR3Q6P9H4 Y_RNA.366-201ENST00000365540 102 ntBASIC2.72□□□□□ -1.97
CNKSR3Q6P9H4 RNU6-756P-201ENST00000383997 107 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms