Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
PRPF40BQ6NWY9 AC092427.1-202ENST00000430569 476 ntBASIC3.13□□□□□ -1.91
PRPF40BQ6NWY9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.13□□□□□ -1.91
PRPF40BQ6NWY9 RNU5E-3P-201ENST00000515913 68 ntBASIC3.13□□□□□ -1.91
PRPF40BQ6NWY9 Y_RNA.714-201ENST00000517065 90 ntBASIC3.13□□□□□ -1.91
PRPF40BQ6NWY9 AC015712.3-201ENST00000559380 164 ntBASIC3.13□□□□□ -1.91
PRPF40BQ6NWY9 DEFB122-202ENST00000569013 197 ntBASIC3.13□□□□□ -1.91
PRPF40BQ6NWY9 AC022217.4-201ENST00000604389 163 ntBASIC3.13□□□□□ -1.91
PRPF40BQ6NWY9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PRPF40BQ6NWY9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PRPF40BQ6NWY9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PRPF40BQ6NWY9 Y_RNA.253-201ENST00000364562 112 ntBASIC3.12□□□□□ -1.91
PRPF40BQ6NWY9 Y_RNA.486-201ENST00000384398 107 ntBASIC3.12□□□□□ -1.91
PRPF40BQ6NWY9 SNORA8-201ENST00000384574 139 ntBASIC3.12□□□□□ -1.91
PRPF40BQ6NWY9 MIR802-201ENST00000390235 94 ntBASIC3.12□□□□□ -1.91
PRPF40BQ6NWY9 SNORA12.1-201ENST00000390873 148 ntBASIC3.12□□□□□ -1.91
PRPF40BQ6NWY9 AL356320.1-201ENST00000429616 163 ntBASIC3.12□□□□□ -1.91
PRPF40BQ6NWY9 AC018634.1-201ENST00000437554 401 ntBASIC3.12□□□□□ -1.91
PRPF40BQ6NWY9 RNU7-128P-201ENST00000517247 62 ntBASIC3.12□□□□□ -1.91
PRPF40BQ6NWY9 RNU1-104P-201ENST00000517280 175 ntBASIC3.12□□□□□ -1.91
PRPF40BQ6NWY9 AC091178.2-201ENST00000584401 117 ntBASIC3.12□□□□□ -1.91
PRPF40BQ6NWY9 AL353149.1-201ENST00000610667 244 ntBASIC3.12□□□□□ -1.91
PRPF40BQ6NWY9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.12□□□□□ -1.91
PRPF40BQ6NWY9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
PRPF40BQ6NWY9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
PRPF40BQ6NWY9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
PRPF40BQ6NWY9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PRPF40BQ6NWY9 RNU6-44P-201ENST00000384045 107 ntBASIC3.11□□□□□ -1.91
PRPF40BQ6NWY9 Y_RNA.525-201ENST00000384570 113 ntBASIC3.11□□□□□ -1.91
PRPF40BQ6NWY9 RNU6-1072P-201ENST00000384703 107 ntBASIC3.11□□□□□ -1.91
PRPF40BQ6NWY9 RNU6-443P-201ENST00000384780 107 ntBASIC3.11□□□□□ -1.91
PRPF40BQ6NWY9 MIR515-2-201ENST00000384883 83 ntBASIC3.11□□□□□ -1.91
PRPF40BQ6NWY9 MIR515-1-201ENST00000384884 83 ntBASIC3.11□□□□□ -1.91
PRPF40BQ6NWY9 RNA5SP127-201ENST00000411051 133 ntBASIC3.11□□□□□ -1.91
PRPF40BQ6NWY9 RNA5SP247-201ENST00000411181 105 ntBASIC3.11□□□□□ -1.91
PRPF40BQ6NWY9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.11□□□□□ -1.91
PRPF40BQ6NWY9 MLLT10P1-201ENST00000418346 262 ntBASIC3.11□□□□□ -1.91
PRPF40BQ6NWY9 AC108210.2-201ENST00000503681 201 ntBASIC3.11□□□□□ -1.91
PRPF40BQ6NWY9 AC234781.5-201ENST00000508429 271 ntBASIC3.11□□□□□ -1.91
PRPF40BQ6NWY9 RNU6-504P-201ENST00000516568 104 ntBASIC3.11□□□□□ -1.91
PRPF40BQ6NWY9 Y_RNA.690-201ENST00000516603 95 ntBASIC3.11□□□□□ -1.91
PRPF40BQ6NWY9 RN7SKP282-201ENST00000516824 299 ntBASIC3.11□□□□□ -1.91
PRPF40BQ6NWY9 RNU6-341P-201ENST00000516973 96 ntBASIC3.11□□□□□ -1.91
PRPF40BQ6NWY9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRPF40BQ6NWY9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.1□□□□□ -1.91
PRPF40BQ6NWY9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRPF40BQ6NWY9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRPF40BQ6NWY9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRPF40BQ6NWY9 MIR126-201ENST00000362291 85 ntBASIC3.1□□□□□ -1.91
PRPF40BQ6NWY9 Y_RNA.242-201ENST00000364473 110 ntBASIC3.1□□□□□ -1.91
PRPF40BQ6NWY9 AL359511.1-201ENST00000402970 211 ntBASIC3.1□□□□□ -1.91
PRPF40BQ6NWY9 AL603825.1-201ENST00000438481 80 ntBASIC3.1□□□□□ -1.91
PRPF40BQ6NWY9 AC104389.3-201ENST00000445629 235 ntBASIC3.1□□□□□ -1.91
PRPF40BQ6NWY9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.1□□□□□ -1.91
PRPF40BQ6NWY9 RNU1-131P-201ENST00000458943 161 ntBASIC3.1□□□□□ -1.91
PRPF40BQ6NWY9 RNU7-94P-201ENST00000459576 63 ntBASIC3.1□□□□□ -1.91
PRPF40BQ6NWY9 NDUFA4P2-201ENST00000489989 244 ntBASIC3.1□□□□□ -1.91
PRPF40BQ6NWY9 MRPS17P9-201ENST00000511924 393 ntBASIC3.1□□□□□ -1.91
PRPF40BQ6NWY9 RNU6-772P-201ENST00000516042 105 ntBASIC3.1□□□□□ -1.91
PRPF40BQ6NWY9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.1□□□□□ -1.91
PRPF40BQ6NWY9 AC133485.4-201ENST00000561835 220 ntBASIC3.1□□□□□ -1.91
PRPF40BQ6NWY9 AC138907.4-201ENST00000570107 226 ntBASIC3.1□□□□□ -1.91
PRPF40BQ6NWY9 ZNF271P-202ENST00000465539 1970 ntBASIC3.09□□□□□ -1.91
PRPF40BQ6NWY9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PRPF40BQ6NWY9 RNU6-1064P-201ENST00000410626 104 ntBASIC3.09□□□□□ -1.91
PRPF40BQ6NWY9 HMGN2P3-201ENST00000433603 273 ntBASIC3.09□□□□□ -1.91
PRPF40BQ6NWY9 HMGN2P5-201ENST00000436882 273 ntBASIC3.09□□□□□ -1.91
PRPF40BQ6NWY9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.09□□□□□ -1.91
PRPF40BQ6NWY9 RNU6-1061P-201ENST00000516530 99 ntBASIC3.09□□□□□ -1.91
PRPF40BQ6NWY9 AL391516.1-201ENST00000554380 2449 ntBASIC3.09□□□□□ -1.92
PRPF40BQ6NWY9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.09□□□□□ -1.92
PRPF40BQ6NWY9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
PRPF40BQ6NWY9 SNORD114-6-201ENST00000364393 72 ntBASIC3.08□□□□□ -1.92
PRPF40BQ6NWY9 Y_RNA.563-201ENST00000384707 108 ntBASIC3.08□□□□□ -1.92
PRPF40BQ6NWY9 AC007064.1-201ENST00000412238 351 ntBASIC3.08□□□□□ -1.92
PRPF40BQ6NWY9 AL158823.1-201ENST00000418441 478 ntBASIC3.08□□□□□ -1.92
PRPF40BQ6NWY9 Y_RNA.712-201ENST00000517011 92 ntBASIC3.08□□□□□ -1.92
PRPF40BQ6NWY9 AL358944.1-201ENST00000528537 144 ntBASIC3.08□□□□□ -1.92
PRPF40BQ6NWY9 AP002004.2-201ENST00000531656 154 ntBASIC3.08□□□□□ -1.92
PRPF40BQ6NWY9 MTND5P34-201ENST00000568888 325 ntBASIC3.08□□□□□ -1.92
PRPF40BQ6NWY9 MIR1273D-201ENST00000577266 86 ntBASIC3.08□□□□□ -1.92
PRPF40BQ6NWY9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.07□□□□□ -1.92
PRPF40BQ6NWY9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PRPF40BQ6NWY9 Y_RNA.66-201ENST00000362862 102 ntBASIC3.07□□□□□ -1.92
PRPF40BQ6NWY9 SNORA33-201ENST00000363664 130 ntBASIC3.07□□□□□ -1.92
PRPF40BQ6NWY9 RNU6-476P-201ENST00000384726 107 ntBASIC3.07□□□□□ -1.92
PRPF40BQ6NWY9 MIR624-201ENST00000385217 97 ntBASIC3.07□□□□□ -1.92
PRPF40BQ6NWY9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.07□□□□□ -1.92
PRPF40BQ6NWY9 RNU6-1270P-201ENST00000517128 108 ntBASIC3.07□□□□□ -1.92
PRPF40BQ6NWY9 AC024995.1-201ENST00000523014 93 ntBASIC3.07□□□□□ -1.92
PRPF40BQ6NWY9 AC007751.1-201ENST00000529260 376 ntBASIC3.07□□□□□ -1.92
PRPF40BQ6NWY9 MIR3129-201ENST00000581095 76 ntBASIC3.07□□□□□ -1.92
PRPF40BQ6NWY9 AC087685.1-201ENST00000587507 141 ntBASIC3.07□□□□□ -1.92
PRPF40BQ6NWY9 AL365205.2-201ENST00000594586 68 ntBASIC3.07□□□□□ -1.92
PRPF40BQ6NWY9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
PRPF40BQ6NWY9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.07□□□□□ -1.92
PRPF40BQ6NWY9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PRPF40BQ6NWY9 Y_RNA.52-201ENST00000362760 96 ntBASIC3.06□□□□□ -1.92
PRPF40BQ6NWY9 Y_RNA.114-201ENST00000363265 113 ntBASIC3.06□□□□□ -1.92
PRPF40BQ6NWY9 RNU6-482P-201ENST00000391068 107 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms